FFCP PHASE1:Hg19::chr20:58411027..58411085,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:58411027..58411085,+ to FFCP PHASE1:Hg19::chr20:58411027..58411085,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116154 | |EntrezGene=116154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15833 | |HGNC=15833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002yay.2_5end | |||
|cluster_id=chr20:58411027..58411085,+ | |||
|coexpression_cluster_id=C4057 | |||
|description=CAGE_peak_3_at_PHACTR3_5end | |||
|id=chr20:58411027..58411085,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.14e-10!43;CL:0002368!7.29e-09!13;CL:0000223!3.28e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.02e-14;13!CL:0002076;4.96e-12;42!CL:0002202;1.16e-08;9!CL:0002632;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.46e-15,42;CL:0002368,3.51e-14,13;CL:0000223,2.33e-09,58;CL:0002202,1.08e-08,9;CL:0002632,1.08e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.70e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.72e-39!115;UBERON:0001049!2.69e-33!57;UBERON:0005068!2.69e-33!57;UBERON:0006241!2.69e-33!57;UBERON:0007135!2.69e-33!57;UBERON:0002780!4.11e-27!41;UBERON:0001890!4.11e-27!41;UBERON:0006240!4.11e-27!41;UBERON:0002616!1.80e-26!59;UBERON:0003080!3.92e-26!42;UBERON:0001017!3.45e-24!82;UBERON:0005743!6.22e-24!86;UBERON:0003075!1.52e-23!86;UBERON:0007284!1.52e-23!86;UBERON:0000073!2.08e-23!94;UBERON:0001016!2.08e-23!94;UBERON:0004121!3.61e-22!169;UBERON:0000955!4.37e-22!69;UBERON:0006238!4.37e-22!69;UBERON:0002346!1.32e-21!90;UBERON:0002020!4.53e-21!34;UBERON:0003528!4.53e-21!34;UBERON:0000924!5.28e-21!173;UBERON:0006601!5.28e-21!173;UBERON:0001893!6.67e-21!34;UBERON:0002791!2.96e-20!33;UBERON:0000153!4.66e-19!129;UBERON:0007811!4.66e-19!129;UBERON:0001869!5.25e-19!32;UBERON:0003056!5.89e-19!61;UBERON:0000033!9.09e-18!123;UBERON:0002619!2.48e-16!22;UBERON:0001950!2.36e-14!20;UBERON:0000956!1.50e-13!25;UBERON:0000203!1.50e-13!25;UBERON:0000064!5.63e-11!219;UBERON:0000480!2.32e-10!626;UBERON:0000467!4.35e-10!625;UBERON:0000062!4.37e-10!511;UBERON:0000468!1.71e-09!659;UBERON:0002308!2.07e-09!9;UBERON:0000125!2.07e-09!9;UBERON:0002420!2.38e-09!9;UBERON:0007245!2.38e-09!9;UBERON:0010009!2.38e-09!9;UBERON:0010011!2.38e-09!9;UBERON:0000454!2.38e-09!9;UBERON:0000119!2.58e-09!312;UBERON:0000483!5.26e-09!309;UBERON:0000475!1.07e-08!365;UBERON:0000922!1.10e-08!612;UBERON:0002050!1.46e-08!605;UBERON:0005423!1.46e-08!605;UBERON:0003076!2.72e-08!15;UBERON:0003057!2.72e-08!15;UBERON:0000923!3.12e-08!604;UBERON:0005291!3.12e-08!604;UBERON:0006598!3.12e-08!604;UBERON:0002532!3.12e-08!604;UBERON:0004111!4.70e-08!241;UBERON:0001894!7.37e-08!7;UBERON:0006222!7.37e-08!7;UBERON:0000481!1.16e-07!347;UBERON:0009663!1.33e-07!7;UBERON:0000477!5.96e-07!286;UBERON:0002298!6.42e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.91e-31;41!UBERON:0001890;6.91e-31;41!UBERON:0001893;1.10e-27;34!UBERON:0003528;1.53e-27;34!UBERON:0002020;1.53e-27;34!UBERON:0000073;2.17e-27;53!UBERON:0002616;2.17e-27;53!UBERON:0002791;1.63e-26;32!UBERON:0001869;3.76e-26;32!UBERON:0002619;2.99e-24;22!UBERON:0001950;4.65e-21;20!UBERON:0000956;9.29e-21;25!UBERON:0000203;9.29e-21;25!UBERON:0001017;4.77e-15;75!UBERON:0000125;1.42e-14;9!UBERON:0002308;1.42e-14;9!UBERON:0002420;2.27e-14;9!UBERON:0007245;2.27e-14;9!UBERON:0010009;2.27e-14;9!UBERON:0010011;2.27e-14;9!UBERON:0000454;2.27e-14;9!UBERON:0000955;2.94e-14;68!UBERON:0001016;7.58e-13;83!UBERON:0001894;6.07e-12;7!UBERON:0009663;1.27e-11;7!UBERON:0002298;8.45e-11;6!UBERON:0007023;1.91e-10;114!UBERON:0000349;5.20e-09;5!UBERON:0001872;3.96e-08;5!UBERON:0002021;3.96e-08;5!UBERON:0004732;9.28e-08;13!UBERON:0003296;2.39e-07;4!UBERON:0010133;2.39e-07;4!UBERON:0002784;4.33e-07;4!UBERON:0000369;8.42e-07;4!UBERON:0002435;8.42e-07;4!UBERON:0000204;8.42e-07;4!UBERON:0000200;8.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.38e-52,56;UBERON:0005068,4.38e-52,56;UBERON:0006241,4.38e-52,56;UBERON:0007135,4.38e-52,56;UBERON:0000073,1.46e-47,53;UBERON:0002616,1.46e-47,53;UBERON:0002780,4.99e-43,41;UBERON:0001890,4.99e-43,41;UBERON:0003080,4.99e-43,41;UBERON:0006240,4.99e-43,41;UBERON:0000955,1.60e-35,68;UBERON:0006238,1.60e-35,68;UBERON:0001017,1.17e-34,81;UBERON:0010371,2.14e-34,104;UBERON:0003528,4.32e-33,34;UBERON:0002020,4.32e-33,34;UBERON:0003075,6.90e-33,82;UBERON:0007284,6.90e-33,82;UBERON:0001893,8.12e-33,34;UBERON:0007023,1.05e-31,114;UBERON:0001016,2.05e-31,89;UBERON:0002346,1.05e-30,86;UBERON:0002791,3.36e-30,32;UBERON:0001869,1.05e-29,32;UBERON:0003056,3.14e-27,61;UBERON:0011216,3.30e-26,223;UBERON:0002619,2.98e-24,22;UBERON:0004121,3.23e-23,171;UBERON:0000924,3.23e-23,171;UBERON:0006601,3.23e-23,171;UBERON:0001950,4.85e-21,20;UBERON:0000956,9.25e-21,25;UBERON:0000203,9.25e-21,25;UBERON:0010314,2.60e-19,132;UBERON:0000483,1.91e-14,306;UBERON:0000125,1.96e-14,9;UBERON:0002308,1.96e-14,9;UBERON:0002420,2.48e-14,9;UBERON:0007245,2.48e-14,9;UBERON:0010009,2.48e-14,9;UBERON:0010011,2.48e-14,9;UBERON:0000454,2.48e-14,9;UBERON:0000119,4.15e-14,309;UBERON:0000025,1.41e-13,192;UBERON:0004111,1.86e-13,240;UBERON:0001894,6.81e-12,7;UBERON:0006222,6.81e-12,7;UBERON:0005423,1.65e-11,581;UBERON:0009663,1.78e-11,7;UBERON:0002050,5.91e-11,564;UBERON:0002298,8.41e-11,6;UBERON:0000922,8.81e-11,592;UBERON:0000923,1.09e-10,560;UBERON:0010316,1.09e-10,560;UBERON:0005291,1.09e-10,560;UBERON:0006598,1.09e-10,560;UBERON:0010317,1.09e-10,560;UBERON:0002532,1.09e-10,560;UBERON:0003076,2.39e-10,15;UBERON:0003057,2.39e-10,15;UBERON:0000349,4.36e-09,5;UBERON:0002021,4.48e-08,5;UBERON:0001872,4.55e-08,5;UBERON:0004732,9.08e-08,13;UBERON:0005153,2.34e-07,37;UBERON:0003296,2.56e-07,4;UBERON:0010133,2.56e-07,4;UBERON:0002784,4.68e-07,4;UBERON:0004119,7.72e-07,160;UBERON:0000925,7.72e-07,160;UBERON:0006595,7.72e-07,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,7.12628415854376,7.6758128476967,4.58726881473362,1.05506791291381,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.764134057479513,0.492603536699674,0.550975469195755,0,0,0,5.51652734687356,5.4217065380085,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,1.73934767846967,3.54569956768085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,10.4540172761647,0,1.86575485194663,0,0.402115889646523,42.8684501083992,0,0,0,0.34779121492523,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0.141775097242386,63.6761096417251,14.5316969256981,2.30029607499127,0,0,0,0,0.12624243342638,0.444485260045183,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,1.45031339509947,1.00253235151642,16.4824970195254,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.509752546090077,0,0,1.31555925987561,1.3071772551245,0.256450125116389,0,0,0.618246069886334,0,0,4.01985876597321,1.30012049207304,0,0,0.154048617114644,0,0.275673144969061,0,0.145016693914229,0.255679882248303,0,4.13212288402445,4.42037154939744,13.1441093869422,2.023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.33354493437467,2.68120910214315,1.08890984861323,1.03558180854457,2.58303223602738,0,0.443430153536676,7.58087220682966,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,3.67560323971548,0,0.432807638929335,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5592940464243,0,31.0232309120224,1.9882952955326,11.534892145662,0.111308705022906,0,0,0,0,0,0,0,0,32.442474764185,0,0,0.197286811273867,0,0,0.969332746095218,5.47331779154922,0,0,0,0,0,0,0,0,0,0,3.54296554325536,4.34147179051469,0,4.75490817704266,0.295547618953547,2.85201016300164,0,0,1.38510465306835,0,0,0.0897576444097721,0,1.91400695839152,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,5.66128412821371,0,0,0,0,8.2229382236426,0,2.34264445725339,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0.751617097072463,1.9700756365477,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,2.65905343014691,0,0,0.426905989478705,0,0.432271251462318,0,0,0,0,0,0,0,0,0,5.4037825983881,9.58337652243951,0,0,0,0,0.229160424011684,0,0.599037001496973,0.858452096273142,1.33902874465124,9.2041357306815,0,0,0,0,0,0,0,7.95229689809303,20.4305109167363,0,0,0,0,0,1.70098758642469,0,1.73372556058236,5.87491387111979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49063982176186,7.66949090107602,0,0,5.44615804095243,13.0479573232723,0,0,0.197611631897944,0,0,0,0,0,0,0,0,2.19647276823534,8.63817421874849,4.58727356552057,20.1890873797071,13.5370158412216,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18943867989,0,0,0,0,0,56.631649060112,0,0,0.344429959321631,0,0,2.93746966210833,0.622077260032973,0.127894371303652,0.215649622793364,0,0.327628914576042,0,0,0,0,0,0.315446980005013,9.60684897942564,0,0,2.18379365327962,2.8339315265117,8.14132681191471,2.05116364240755,1.00828678488687,2.76629009856872,4.68279372332368,4.28308260777463,0,0,0,0,0,0,0.795664888465099,0.0752103283492573,0,0,0,1.31017534008077,0,1.14813893851271,2.34323429584154,8.06078506354618,2.34638497717455,2.18789923607288,0,0,0,1.91643641459393,1.07140367175657,1.68141861109412,28.5273833991217,49.1750333318803,0.709618961301111,0.460935950223117,0,2.31097092121228,1.51277379194553,0,129.0284261948,0.078493092850514,1.25692471932802,0,0.913158720509496,0,0,0.142953088353313,0,0,2.60787408453869,0,0.62164849248911,10.4138271027309,3.45629830907046,0,0,0,0,1.60374807980835,0,0,0,0.490751168076215,0,1.94228651156368,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0,0,4.37792246343353,5.55653938377201,0.437119121007915,92.1821900868585,0.245148321753905,0,5.30032861210352,18.1198304199522,2.5359343655004,0,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0,2.19100916473955,0.458729283404541,9.17373332169288,3.31320280605688,2.17572768610927,2.61810414204226,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.378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| ||
|short_description=p3@PHACTR3 | |||
}} | }} |
Latest revision as of 08:06, 17 September 2015
Short description: | p3@PHACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHACTR3_5end |
Coexpression cluster: | C4057_prostate_smallcell_Mammary_mucinous_pituitary_Keratinocyte_bile |
Association with transcript: | 0bp_to_uc002yay.2_5end |
EntrezGene: | PHACTR3 |
HGNC: | 15833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.46e-15 | 42 |
respiratory epithelial cell | 3.51e-14 | 13 |
endodermal cell | 2.33e-09 | 58 |
epithelial cell of tracheobronchial tree | 1.08e-08 | 9 |
epithelial cell of lower respiratory tract | 1.08e-08 | 9 |