FFCP PHASE1:Hg19::chr11:31839453..31839462,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:31839453..31839462,- to FFCP PHASE1:Hg19::chr11:31839453..31839462,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIX4 | |UniProt=E9PIX4 | ||
|association_with_transcript=22bp_to_ENST00000464174_5end | |||
|cluster_id=chr11:31839453..31839462,- | |||
|coexpression_cluster_id=C3140 | |||
|description=CAGE_peak_9_at_PAX6_5end | |||
|id=chr11:31839453..31839462,- | |||
|ontology_enrichment_celltype=CL:0000064!6.30e-09!3;CL:0005012!6.30e-09!3;CL:0000067!6.30e-09!3;CL:0002304!6.30e-09!3;CL:0002605!7.92e-09!3;CL:0000047!1.44e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000064;6.45e-12;3!CL:0000067;6.45e-12;3!CL:0005012;6.45e-12;3!CL:0002304;6.45e-12;3!CL:0002605;7.44e-12;3!CL:0000306;2.88e-08;4!CL:0002222;2.88e-08;4!CL:0002224;2.88e-08;4!CL:0000575;4.77e-08;2!CL:0000047;6.99e-08;2!CL:0002319;5.59e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.93e-12,3;CL:0000067,5.93e-12,3;CL:0005012,5.93e-12,3;CL:0002304,5.93e-12,3;CL:0002605,8.17e-12,3;CL:0000047,2.08e-10,8;CL:0000306,2.85e-08,4;CL:0002222,2.85e-08,4;CL:0002224,2.85e-08,4;CL:0000575,4.79e-08,2;CL:0002319,5.43e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-12;82!UBERON:0006241;4.52e-11;3!UBERON:0003057;4.52e-11;3!UBERON:0010122;1.04e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!4.86e-98!86;UBERON:0007284!4.86e-98!86;UBERON:0001049!5.37e-97!57;UBERON:0005068!5.37e-97!57;UBERON:0006241!5.37e-97!57;UBERON:0007135!5.37e-97!57;UBERON:0001017!6.41e-94!82;UBERON:0002346!5.56e-93!90;UBERON:0005743!2.46e-92!86;UBERON:0000073!3.30e-82!94;UBERON:0001016!3.30e-82!94;UBERON:0003056!1.52e-81!61;UBERON:0002616!3.11e-81!59;UBERON:0000955!2.42e-76!69;UBERON:0006238!2.42e-76!69;UBERON:0002780!7.38e-76!41;UBERON:0001890!7.38e-76!41;UBERON:0006240!7.38e-76!41;UBERON:0003080!8.05e-74!42;UBERON:0001893!1.24e-65!34;UBERON:0002020!2.58e-65!34;UBERON:0003528!2.58e-65!34;UBERON:0002791!8.31e-64!33;UBERON:0001869!2.12e-61!32;UBERON:0000033!8.94e-61!123;UBERON:0000153!3.05e-59!129;UBERON:0007811!3.05e-59!129;UBERON:0004121!5.53e-56!169;UBERON:0000924!2.66e-54!173;UBERON:0006601!2.66e-54!173;UBERON:0000956!4.80e-51!25;UBERON:0000203!4.80e-51!25;UBERON:0002619!7.72e-44!22;UBERON:0001950!7.74e-44!20;UBERON:0007023!1.52e-37!115;UBERON:0003076!5.87e-23!15;UBERON:0003057!5.87e-23!15;UBERON:0000025!5.97e-21!194;UBERON:0000483!5.25e-19!309;UBERON:0000119!1.16e-18!312;UBERON:0000064!1.65e-18!219;UBERON:0001871!1.07e-17!7;UBERON:0004733!1.43e-16!12;UBERON:0002028!1.43e-16!12;UBERON:0007277!1.43e-16!12;UBERON:0002420!8.25e-16!9;UBERON:0007245!8.25e-16!9;UBERON:0010009!8.25e-16!9;UBERON:0010011!8.25e-16!9;UBERON:0000454!8.25e-16!9;UBERON:0002308!1.93e-15!9;UBERON:0000125!1.93e-15!9;UBERON:0004732!3.92e-15!13;UBERON:0000477!1.90e-14!286;UBERON:0000475!3.13e-14!365;UBERON:0004111!3.42e-14!241;UBERON:0001801!1.40e-13!14;UBERON:0000970!1.45e-13!20;UBERON:0000200!2.31e-13!6;UBERON:0002104!8.66e-13!21;UBERON:0002021!1.26e-12!5;UBERON:0002298!2.14e-12!8;UBERON:0009663!7.17e-12!7;UBERON:0000019!9.45e-12!19;UBERON:0000047!9.45e-12!19;UBERON:0004088!9.45e-12!19;UBERON:0003072!9.45e-12!19;UBERON:0003071!9.45e-12!19;UBERON:0004128!9.45e-12!19;UBERON:0000020!1.94e-11!23;UBERON:0001894!2.17e-11!7;UBERON:0006222!2.17e-11!7;UBERON:0000488!2.45e-11!4;UBERON:0002680!2.82e-11!9;UBERON:0001895!2.82e-11!9;UBERON:0010092!2.82e-11!9;UBERON:0001872!4.11e-11!5;UBERON:0007625!7.48e-11!11;UBERON:0001032!7.52e-11!24;UBERON:0004456!7.52e-11!24;UBERON:0001456!2.08e-10!21;UBERON:0000481!5.21e-10!347;UBERON:0000369!6.14e-10!4;UBERON:0002435!6.14e-10!4;UBERON:0000204!6.14e-10!4;UBERON:0010082!6.14e-10!4;UBERON:0000062!3.84e-09!511;UBERON:0001778!6.30e-09!3;UBERON:0001775!6.30e-09!3;UBERON:0000922!8.05e-09!612;UBERON:0002240!2.15e-08!3;UBERON:0002771!4.24e-08!3;UBERON:0005383!5.92e-08!3;UBERON:0005382!5.92e-08!3;UBERON:0000349!6.35e-08!5;UBERON:0002203!1.68e-07!6;UBERON:0001768!1.68e-07!6;UBERON:0000923!1.82e-07!604;UBERON:0005291!1.82e-07!604;UBERON:0006598!1.82e-07!604;UBERON:0002532!1.82e-07!604;UBERON:0002050!2.02e-07!605;UBERON:0005423!2.02e-07!605;UBERON:0000468!2.53e-07!659;UBERON:0001896!3.50e-07!3;UBERON:0005290!3.50e-07!3;UBERON:0010096!3.50e-07!3;UBERON:0000467!3.59e-07!625;UBERON:0006331!3.83e-07!3;UBERON:0000480!3.95e-07!626;UBERON:0005085!6.43e-07!29;UBERON:0000988!6.65e-07!3 | |||
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| ||
|short_description=p9@PAX6 | |||
}} | }} |
Latest revision as of 15:05, 17 September 2015
Short description: | p9@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PAX6_5end |
Coexpression cluster: | C3140_argyrophil_Lens_Ciliary_eye_small_Astrocyte_Iris |
Association with transcript: | 22bp_to_ENST00000464174_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | E9PIX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.93e-12 | 3 |
ciliated epithelial cell | 5.93e-12 | 3 |
multi-ciliated epithelial cell | 5.93e-12 | 3 |
non-pigmented ciliary epithelial cell | 5.93e-12 | 3 |
astrocyte of the cerebral cortex | 8.17e-12 | 3 |
neuronal stem cell | 2.08e-10 | 8 |
crystallin accumulating cell | 2.85e-08 | 4 |
vertebrate lens cell | 2.85e-08 | 4 |
lens epithelial cell | 2.85e-08 | 4 |
corneal epithelial cell | 4.79e-08 | 2 |
neural cell | 5.43e-07 | 25 |