FFCP PHASE1:Hg19::chr17:7758374..7758390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92162 | |EntrezGene=92162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32371 | |HGNC=32371 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PEY1 | |UniProt=Q6PEY1 | ||
|association_with_transcript=0bp_to_ENST00000301599,NM_203411,uc002giy.2_5end | |association_with_transcript=0bp_to_ENST00000301599,NM_203411,uc002giy.2_5end | ||
|cluster_id=chr17:7758374..7758390,+ | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_1_at_TMEM88_5end | |description=CAGE_peak_1_at_TMEM88_5end | ||
|id=chr17:7758374..7758390,+ | |id=chr17:7758374..7758390,+ | ||
|ontology_enrichment_celltype=CL:0000115!2.13e-16!35;CL:0002078!3.23e-15!44;CL:0002139!1.96e-14!24;CL:0000071!1.41e-10!18;CL:0002546!1.41e-10!18;CL:0000213!1.17e-07!57;CL:0000215!1.17e-07!57;CL:1000449!1.41e-07!16;CL:0000222!2.62e-07!119 | |ontology_enrichment_celltype=CL:0000115!2.13e-16!35;CL:0002078!3.23e-15!44;CL:0002139!1.96e-14!24;CL:0000071!1.41e-10!18;CL:0002546!1.41e-10!18;CL:0000213!1.17e-07!57;CL:0000215!1.17e-07!57;CL:1000449!1.41e-07!16;CL:0000222!2.62e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.35e-16;36!CL:0002139;5.83e-16;24!CL:0002078;7.52e-12;45!CL:0000071;1.19e-11;18!CL:1000449;4.29e-09;15!CL:0002681;4.72e-08;12!CL:0002584;4.72e-08;12!CL:1000497;1.75e-07;17!CL:0002518;1.75e-07;17!CL:0002543;9.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.54e-19,36;CL:0002078,3.50e-18,45;CL:0002139,5.58e-16,24;CL:0000071,1.10e-11,18;CL:0002546,1.10e-11,18;CL:1000449,3.32e-09,15;CL:0000213,5.36e-09,58;CL:0000215,5.36e-09,58;CL:0002681,3.93e-08,12;CL:0002584,3.93e-08,12;CL:1000497,1.41e-07,17;CL:0002518,1.41e-07,17;CL:0002543,9.21e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.19e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.24e-40!115;UBERON:0000477!1.62e-26!286;UBERON:0000119!3.67e-25!312;UBERON:0004111!1.28e-24!241;UBERON:0000483!2.12e-24!309;UBERON:0000025!6.11e-24!194;UBERON:0003075!2.96e-23!86;UBERON:0007284!2.96e-23!86;UBERON:0002346!4.62e-21!90;UBERON:0000468!4.63e-19!659;UBERON:0000481!2.08e-18!347;UBERON:0005743!2.99e-18!86;UBERON:0003056!2.10e-17!61;UBERON:0001049!7.41e-17!57;UBERON:0005068!7.41e-17!57;UBERON:0006241!7.41e-17!57;UBERON:0007135!7.41e-17!57;UBERON:0002616!7.56e-17!59;UBERON:0000922!1.15e-16!612;UBERON:0001017!9.16e-16!82;UBERON:0000073!1.20e-15!94;UBERON:0001016!1.20e-15!94;UBERON:0000064!9.80e-15!219;UBERON:0000467!2.63e-14!625;UBERON:0000480!3.73e-14!626;UBERON:0000955!6.55e-14!69;UBERON:0006238!6.55e-14!69;UBERON:0002050!9.57e-14!605;UBERON:0005423!9.57e-14!605;UBERON:0000923!2.48e-13!604;UBERON:0005291!2.48e-13!604;UBERON:0006598!2.48e-13!604;UBERON:0002532!2.48e-13!604;UBERON:0003080!3.16e-13!42;UBERON:0001009!5.16e-13!113;UBERON:0002049!5.39e-13!79;UBERON:0007798!5.39e-13!79;UBERON:0002780!1.29e-12!41;UBERON:0001890!1.29e-12!41;UBERON:0006240!1.29e-12!41;UBERON:0000153!1.98e-12!129;UBERON:0007811!1.98e-12!129;UBERON:0000033!1.08e-11!123;UBERON:0004535!1.55e-11!110;UBERON:0003914!1.61e-11!118;UBERON:0001893!2.76e-11!34;UBERON:0004121!4.35e-11!169;UBERON:0002020!4.75e-11!34;UBERON:0003528!4.75e-11!34;UBERON:0002791!5.97e-11!33;UBERON:0001869!1.08e-10!32;UBERON:0001986!1.41e-10!18;UBERON:0004638!1.41e-10!18;UBERON:0004852!1.41e-10!18;UBERON:0003103!1.66e-10!69;UBERON:0000924!3.12e-10!173;UBERON:0006601!3.12e-10!173;UBERON:0000055!1.40e-09!69;UBERON:0003887!5.84e-09!21;UBERON:0004872!5.97e-09!84;UBERON:0000956!9.87e-09!25;UBERON:0000203!9.87e-09!25;UBERON:0000475!1.07e-08!365;UBERON:0000080!1.32e-08!18;UBERON:0002120!1.32e-08!18;UBERON:0004875!1.32e-08!18;UBERON:0005721!1.32e-08!18;UBERON:0005754!1.32e-08!18;UBERON:0007297!1.32e-08!18;UBERON:0001638!1.58e-08!9;UBERON:0003920!1.58e-08!9;UBERON:0004582!1.58e-08!9;UBERON:0006914!1.85e-08!25;UBERON:0004876!2.23e-08!20;UBERON:0000487!2.56e-08!22;UBERON:0006555!4.75e-08!17;UBERON:0005103!4.75e-08!17;UBERON:0000083!4.75e-08!17;UBERON:0009201!4.75e-08!17;UBERON:0004819!4.75e-08!17;UBERON:0006553!4.75e-08!17;UBERON:0003074!4.75e-08!17;UBERON:0003060!4.75e-08!17;UBERON:0002619!7.22e-08!22;UBERON:0004211!1.41e-07!16;UBERON:0001285!1.41e-07!16;UBERON:0007684!1.41e-07!16;UBERON:0003220!1.41e-07!16;UBERON:0004208!1.41e-07!16;UBERON:0001950!2.10e-07!20;UBERON:0002465!2.73e-07!10;UBERON:0000489!3.77e-07!32;UBERON:0001032!6.22e-07!24;UBERON:0004456!6.22e-07!24 | |ontology_enrichment_uberon=UBERON:0007023!9.24e-40!115;UBERON:0000477!1.62e-26!286;UBERON:0000119!3.67e-25!312;UBERON:0004111!1.28e-24!241;UBERON:0000483!2.12e-24!309;UBERON:0000025!6.11e-24!194;UBERON:0003075!2.96e-23!86;UBERON:0007284!2.96e-23!86;UBERON:0002346!4.62e-21!90;UBERON:0000468!4.63e-19!659;UBERON:0000481!2.08e-18!347;UBERON:0005743!2.99e-18!86;UBERON:0003056!2.10e-17!61;UBERON:0001049!7.41e-17!57;UBERON:0005068!7.41e-17!57;UBERON:0006241!7.41e-17!57;UBERON:0007135!7.41e-17!57;UBERON:0002616!7.56e-17!59;UBERON:0000922!1.15e-16!612;UBERON:0001017!9.16e-16!82;UBERON:0000073!1.20e-15!94;UBERON:0001016!1.20e-15!94;UBERON:0000064!9.80e-15!219;UBERON:0000467!2.63e-14!625;UBERON:0000480!3.73e-14!626;UBERON:0000955!6.55e-14!69;UBERON:0006238!6.55e-14!69;UBERON:0002050!9.57e-14!605;UBERON:0005423!9.57e-14!605;UBERON:0000923!2.48e-13!604;UBERON:0005291!2.48e-13!604;UBERON:0006598!2.48e-13!604;UBERON:0002532!2.48e-13!604;UBERON:0003080!3.16e-13!42;UBERON:0001009!5.16e-13!113;UBERON:0002049!5.39e-13!79;UBERON:0007798!5.39e-13!79;UBERON:0002780!1.29e-12!41;UBERON:0001890!1.29e-12!41;UBERON:0006240!1.29e-12!41;UBERON:0000153!1.98e-12!129;UBERON:0007811!1.98e-12!129;UBERON:0000033!1.08e-11!123;UBERON:0004535!1.55e-11!110;UBERON:0003914!1.61e-11!118;UBERON:0001893!2.76e-11!34;UBERON:0004121!4.35e-11!169;UBERON:0002020!4.75e-11!34;UBERON:0003528!4.75e-11!34;UBERON:0002791!5.97e-11!33;UBERON:0001869!1.08e-10!32;UBERON:0001986!1.41e-10!18;UBERON:0004638!1.41e-10!18;UBERON:0004852!1.41e-10!18;UBERON:0003103!1.66e-10!69;UBERON:0000924!3.12e-10!173;UBERON:0006601!3.12e-10!173;UBERON:0000055!1.40e-09!69;UBERON:0003887!5.84e-09!21;UBERON:0004872!5.97e-09!84;UBERON:0000956!9.87e-09!25;UBERON:0000203!9.87e-09!25;UBERON:0000475!1.07e-08!365;UBERON:0000080!1.32e-08!18;UBERON:0002120!1.32e-08!18;UBERON:0004875!1.32e-08!18;UBERON:0005721!1.32e-08!18;UBERON:0005754!1.32e-08!18;UBERON:0007297!1.32e-08!18;UBERON:0001638!1.58e-08!9;UBERON:0003920!1.58e-08!9;UBERON:0004582!1.58e-08!9;UBERON:0006914!1.85e-08!25;UBERON:0004876!2.23e-08!20;UBERON:0000487!2.56e-08!22;UBERON:0006555!4.75e-08!17;UBERON:0005103!4.75e-08!17;UBERON:0000083!4.75e-08!17;UBERON:0009201!4.75e-08!17;UBERON:0004819!4.75e-08!17;UBERON:0006553!4.75e-08!17;UBERON:0003074!4.75e-08!17;UBERON:0003060!4.75e-08!17;UBERON:0002619!7.22e-08!22;UBERON:0004211!1.41e-07!16;UBERON:0001285!1.41e-07!16;UBERON:0007684!1.41e-07!16;UBERON:0003220!1.41e-07!16;UBERON:0004208!1.41e-07!16;UBERON:0001950!2.10e-07!20;UBERON:0002465!2.73e-07!10;UBERON:0000489!3.77e-07!32;UBERON:0001032!6.22e-07!24;UBERON:0004456!6.22e-07!24 | ||
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| ||
|short_description=p1@TMEM88 | |short_description=p1@TMEM88 | ||
}} | }} |
Latest revision as of 02:10, 18 September 2015
Short description: | p1@TMEM88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM88_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000301599, NM_203411, uc002giy.2_5end |
EntrezGene: | TMEM88 |
HGNC: | 32371 |
UniProt: | Q6PEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.54e-19 | 36 |
meso-epithelial cell | 3.50e-18 | 45 |
endothelial cell of vascular tree | 5.58e-16 | 24 |
blood vessel endothelial cell | 1.10e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.10e-11 | 18 |
epithelial cell of nephron | 3.32e-09 | 15 |
lining cell | 5.36e-09 | 58 |
barrier cell | 5.36e-09 | 58 |
kidney cortical cell | 3.93e-08 | 12 |
renal cortical epithelial cell | 3.93e-08 | 12 |
kidney cell | 1.41e-07 | 17 |
kidney epithelial cell | 1.41e-07 | 17 |
vein endothelial cell | 9.21e-07 | 6 |