FFCP PHASE1:Hg19::chr4:62066409..62066507,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:62066409..62066507,+ to FFCP PHASE1:Hg19::chr4:62066409..62066507,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23284 | |EntrezGene=23284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20974 | |HGNC=20974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-466bp_to_uc003hcq.3,uc010ihg.1_5end | |||
|cluster_id=chr4:62066409..62066507,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_LPHN3_5end | |||
|id=chr4:62066409..62066507,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.65e-50!94;UBERON:0001016!6.65e-50!94;UBERON:0005743!4.47e-49!86;UBERON:0001017!8.17e-48!82;UBERON:0007023!2.31e-46!115;UBERON:0001049!1.45e-42!57;UBERON:0005068!1.45e-42!57;UBERON:0006241!1.45e-42!57;UBERON:0007135!1.45e-42!57;UBERON:0000955!1.37e-41!69;UBERON:0006238!1.37e-41!69;UBERON:0002616!1.58e-41!59;UBERON:0003075!1.73e-38!86;UBERON:0007284!1.73e-38!86;UBERON:0002346!1.04e-37!90;UBERON:0004121!1.44e-33!169;UBERON:0000924!1.73e-33!173;UBERON:0006601!1.73e-33!173;UBERON:0002780!1.59e-32!41;UBERON:0001890!1.59e-32!41;UBERON:0006240!1.59e-32!41;UBERON:0003080!2.64e-31!42;UBERON:0001893!2.78e-30!34;UBERON:0002020!2.96e-30!34;UBERON:0003528!2.96e-30!34;UBERON:0000153!6.05e-30!129;UBERON:0007811!6.05e-30!129;UBERON:0000033!1.93e-29!123;UBERON:0002791!2.37e-29!33;UBERON:0001869!8.99e-29!32;UBERON:0003056!4.79e-27!61;UBERON:0000956!1.99e-22!25;UBERON:0000203!1.99e-22!25;UBERON:0002619!7.52e-22!22;UBERON:0001950!4.06e-20!20;UBERON:0000064!2.92e-14!219;UBERON:0003076!4.14e-12!15;UBERON:0003057!4.14e-12!15;UBERON:0000062!2.15e-11!511;UBERON:0000481!3.34e-11!347;UBERON:0000025!3.59e-11!194;UBERON:0000922!8.16e-11!612;UBERON:0004732!1.64e-10!13;UBERON:0000468!1.70e-10!659;UBERON:0000477!1.94e-10!286;UBERON:0000483!3.36e-10!309;UBERON:0000119!4.18e-10!312;UBERON:0004733!9.94e-10!12;UBERON:0002028!9.94e-10!12;UBERON:0007277!9.94e-10!12;UBERON:0000467!1.06e-09!625;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0000480!1.39e-09!626;UBERON:0002420!1.66e-09!9;UBERON:0007245!1.66e-09!9;UBERON:0010009!1.66e-09!9;UBERON:0010011!1.66e-09!9;UBERON:0000454!1.66e-09!9;UBERON:0000923!2.28e-09!604;UBERON:0005291!2.28e-09!604;UBERON:0006598!2.28e-09!604;UBERON:0002532!2.28e-09!604;UBERON:0004111!2.30e-09!241;UBERON:0002308!3.17e-09!9;UBERON:0000125!3.17e-09!9;UBERON:0000475!1.19e-08!365;UBERON:0001871!1.32e-08!7;UBERON:0009663!1.24e-07!7;UBERON:0002680!1.98e-07!9;UBERON:0001895!1.98e-07!9;UBERON:0010092!1.98e-07!9;UBERON:0000200!6.24e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.12e-34;34!UBERON:0002020;6.12e-34;34!UBERON:0001893;6.86e-34;34!UBERON:0001869;7.32e-34;32!UBERON:0002791;1.05e-33;32!UBERON:0002619;5.94e-33;22!UBERON:0002780;1.01e-30;41!UBERON:0001890;1.01e-30;41!UBERON:0001950;2.87e-30;20!UBERON:0000073;6.73e-29;53!UBERON:0002616;6.73e-29;53!UBERON:0000956;4.02e-28;25!UBERON:0000203;4.02e-28;25!UBERON:0001017;4.12e-23;75!UBERON:0000955;4.18e-21;68!UBERON:0001016;4.95e-20;83!UBERON:0007023;1.43e-14;114!UBERON:0002420;8.14e-14;9!UBERON:0007245;8.14e-14;9!UBERON:0010009;8.14e-14;9!UBERON:0010011;8.14e-14;9!UBERON:0000454;8.14e-14;9!UBERON:0000125;2.12e-13;9!UBERON:0002308;2.12e-13;9!UBERON:0004732;7.34e-12;13!UBERON:0001871;4.69e-11;6!UBERON:0009663;6.23e-11;7!UBERON:0011216;1.00e-10;132!UBERON:0004733;1.05e-10;12!UBERON:0002028;1.05e-10;12!UBERON:0000200;7.06e-10;6!UBERON:0002298;6.34e-09;6!UBERON:0000349;1.34e-08;5!UBERON:0001872;2.00e-08;5!UBERON:0002021;2.20e-08;5!UBERON:0000922;2.39e-07;49!UBERON:0002680;2.40e-07;9!UBERON:0001895;2.40e-07;9!UBERON:0000369;2.61e-07;4!UBERON:0002435;2.61e-07;4!UBERON:0000204;2.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-58,81;UBERON:0001016,4.10e-58,89;UBERON:0001049,2.56e-56,56;UBERON:0005068,2.56e-56,56;UBERON:0006241,2.56e-56,56;UBERON:0007135,2.56e-56,56;UBERON:0007023,1.45e-52,114;UBERON:0000073,2.05e-52,53;UBERON:0002616,2.05e-52,53;UBERON:0000955,1.42e-49,68;UBERON:0006238,1.42e-49,68;UBERON:0003075,5.08e-47,82;UBERON:0007284,5.08e-47,82;UBERON:0002346,1.56e-45,86;UBERON:0002780,9.18e-43,41;UBERON:0001890,9.18e-43,41;UBERON:0003080,9.18e-43,41;UBERON:0006240,9.18e-43,41;UBERON:0001893,4.08e-40,34;UBERON:0003528,4.48e-40,34;UBERON:0002020,4.48e-40,34;UBERON:0001869,8.89e-38,32;UBERON:0002791,1.57e-37,32;UBERON:0010371,3.04e-37,104;UBERON:0003056,1.66e-35,61;UBERON:0004121,4.72e-35,171;UBERON:0000924,4.72e-35,171;UBERON:0006601,4.72e-35,171;UBERON:0002619,6.29e-33,22;UBERON:0010314,3.71e-32,132;UBERON:0001950,3.05e-30,20;UBERON:0011216,5.50e-29,223;UBERON:0000956,4.22e-28,25;UBERON:0000203,4.22e-28,25;UBERON:0003076,3.35e-14,15;UBERON:0003057,3.35e-14,15;UBERON:0002420,7.96e-14,9;UBERON:0007245,7.96e-14,9;UBERON:0010009,7.96e-14,9;UBERON:0010011,7.96e-14,9;UBERON:0000454,7.96e-14,9;UBERON:0000125,2.16e-13,9;UBERON:0002308,2.16e-13,9;UBERON:0000025,6.28e-13,192;UBERON:0004732,8.25e-12,13;UBERON:0001871,4.71e-11,6;UBERON:0009663,6.11e-11,7;UBERON:0004733,1.21e-10,12;UBERON:0002028,1.21e-10,12;UBERON:0007277,1.21e-10,12;UBERON:0004111,1.42e-10,240;UBERON:0000200,7.34e-10,6;UBERON:0000483,2.50e-09,306;UBERON:0002050,2.51e-09,564;UBERON:0000923,3.32e-09,560;UBERON:0010316,3.32e-09,560;UBERON:0005291,3.32e-09,560;UBERON:0006598,3.32e-09,560;UBERON:0010317,3.32e-09,560;UBERON:0002532,3.32e-09,560;UBERON:0000922,4.40e-09,592;UBERON:0000119,4.88e-09,309;UBERON:0002298,6.30e-09,6;UBERON:0000349,1.33e-08,5;UBERON:0005423,1.58e-08,581;UBERON:0001872,2.01e-08,5;UBERON:0002021,2.26e-08,5;UBERON:0000369,2.49e-07,4;UBERON:0002435,2.49e-07,4;UBERON:0000204,2.49e-07,4;UBERON:0010082,2.49e-07,4;UBERON:0002680,2.88e-07,9;UBERON:0001895,2.88e-07,9;UBERON:0010092,2.88e-07,9 | |||
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| ||
|short_description=p1@LPHN3 | |||
}} | }} |
Latest revision as of 04:20, 18 September 2015
Short description: | p1@LPHN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPHN3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -466bp_to_uc003hcq.3, uc010ihg.1_5end |
EntrezGene: | LPHN3 |
HGNC: | 20974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data