FFCP PHASE1:Hg19::chr21:41239344..41239371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5121 | |EntrezGene=5121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8742 | |HGNC=8742 | ||
|TSSclassifier=strong | |||
|UniProt=F6SSA2,P48539,Q6ICS4 | |UniProt=F6SSA2,P48539,Q6ICS4 | ||
|association_with_transcript=0bp_to_ENST00000462224,NM_006198,uc002yyp.2_5end | |association_with_transcript=0bp_to_ENST00000462224,NM_006198,uc002yyp.2_5end | ||
|cluster_id=chr21:41239344..41239371,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_PCP4_5end | |description=CAGE_peak_1_at_PCP4_5end | ||
|id=chr21:41239344..41239371,+ | |id=chr21:41239344..41239371,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.20e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;2.79e-33;53!UBERON:0002616;2.79e-33;53!UBERON:0002780;4.22e-33;41!UBERON:0001890;4.22e-33;41!UBERON:0001893;1.43e-32;34!UBERON:0001869;2.71e-32;32!UBERON:0003528;3.13e-32;34!UBERON:0002020;3.13e-32;34!UBERON:0002791;4.40e-32;32!UBERON:0002619;2.95e-28;22!UBERON:0001950;3.92e-26;20!UBERON:0000956;5.59e-26;25!UBERON:0000203;5.59e-26;25!UBERON:0001017;7.41e-25;75!UBERON:0000955;5.28e-24;68!UBERON:0001016;1.35e-21;83!UBERON:0007023;7.19e-18;114!UBERON:0004732;1.25e-13;13!UBERON:0000125;1.51e-13;9!UBERON:0002308;1.51e-13;9!UBERON:0002420;1.60e-13;9!UBERON:0007245;1.60e-13;9!UBERON:0010009;1.60e-13;9!UBERON:0010011;1.60e-13;9!UBERON:0000454;1.60e-13;9!UBERON:0004733;7.33e-13;12!UBERON:0002028;7.33e-13;12!UBERON:0009663;2.92e-11;7!UBERON:0011216;8.01e-11;132!UBERON:0001894;2.28e-09;7!UBERON:0001871;2.83e-09;6!UBERON:0002680;3.77e-09;9!UBERON:0001895;3.77e-09;9!UBERON:0002298;6.99e-09;6!UBERON:0000160;7.17e-09;17!UBERON:0000200;7.86e-09;6!UBERON:0001872;1.27e-07;5!UBERON:0002021;1.52e-07;5!UBERON:0000369;1.66e-07;4!UBERON:0002435;1.66e-07;4!UBERON:0000204;1.66e-07;4!UBERON:0000349;1.96e-07;5!UBERON:0005409;2.77e-07;22!UBERON:0007625;6.01e-07;11!UBERON:0010314;6.99e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.15e-64,114;UBERON:0001049,4.47e-62,56;UBERON:0005068,4.47e-62,56;UBERON:0006241,4.47e-62,56;UBERON:0007135,4.47e-62,56;UBERON:0001017,7.22e-61,81;UBERON:0000073,1.84e-58,53;UBERON:0002616,1.84e-58,53;UBERON:0001016,3.40e-56,89;UBERON:0002346,1.27e-55,86;UBERON:0003075,3.18e-55,82;UBERON:0007284,3.18e-55,82;UBERON:0000955,3.80e-54,68;UBERON:0006238,3.80e-54,68;UBERON:0002780,2.34e-46,41;UBERON:0001890,2.34e-46,41;UBERON:0003080,2.34e-46,41;UBERON:0006240,2.34e-46,41;UBERON:0003056,1.52e-45,61;UBERON:0010371,2.03e-42,104;UBERON:0001893,2.97e-38,34;UBERON:0003528,5.51e-38,34;UBERON:0002020,5.51e-38,34;UBERON:0001869,6.29e-36,32;UBERON:0002791,1.34e-35,32;UBERON:0004121,1.70e-35,171;UBERON:0000924,1.70e-35,171;UBERON:0006601,1.70e-35,171;UBERON:0010314,4.16e-33,132;UBERON:0011216,4.03e-31,223;UBERON:0002619,2.95e-28,22;UBERON:0001950,3.96e-26,20;UBERON:0000956,5.60e-26,25;UBERON:0000203,5.60e-26,25;UBERON:0003076,3.39e-16,15;UBERON:0003057,3.39e-16,15;UBERON:0004732,1.24e-13,13;UBERON:0000125,1.52e-13,9;UBERON:0002308,1.52e-13,9;UBERON:0002420,1.61e-13,9;UBERON:0007245,1.61e-13,9;UBERON:0010009,1.61e-13,9;UBERON:0010011,1.61e-13,9;UBERON:0000454,1.61e-13,9;UBERON:0004733,7.03e-13,12;UBERON:0002028,7.03e-13,12;UBERON:0007277,7.03e-13,12;UBERON:0000025,1.54e-11,192;UBERON:0009663,2.92e-11,7;UBERON:0000922,1.80e-10,592;UBERON:0004111,2.16e-10,240;UBERON:0002050,1.02e-09,564;UBERON:0000923,1.65e-09,560;UBERON:0010316,1.65e-09,560;UBERON:0005291,1.65e-09,560;UBERON:0006598,1.65e-09,560;UBERON:0010317,1.65e-09,560;UBERON:0002532,1.65e-09,560;UBERON:0000119,1.65e-09,309;UBERON:0000483,2.08e-09,306;UBERON:0005423,2.12e-09,581;UBERON:0001894,2.31e-09,7;UBERON:0006222,2.31e-09,7;UBERON:0001871,2.85e-09,6;UBERON:0002680,3.63e-09,9;UBERON:0001895,3.63e-09,9;UBERON:0010092,3.63e-09,9;UBERON:0002298,7.04e-09,6;UBERON:0000160,7.62e-09,17;UBERON:0000200,7.86e-09,6;UBERON:0001872,1.27e-07,5;UBERON:0002021,1.52e-07,5;UBERON:0000369,1.66e-07,4;UBERON:0002435,1.66e-07,4;UBERON:0000204,1.66e-07,4;UBERON:0010082,1.66e-07,4;UBERON:0000349,1.95e-07,5;UBERON:0007625,5.83e-07,11 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,6.00439790118782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84681587115182,0.408001382488506,10.657460530255,1.43117993565528,0,0.753255837568817,0,0,0,0,0,0,0,0,0,74.2910453565093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2348744029695,2.21729397462564,3.86473057049755,54.4872954070485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38936540170301,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,1.85910308591229,2.28054321033815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2223861739376,0,15.127577940803,5.14703430895577,0,0,0,0,0,0,1.44331342025273,2.55046890945169,0.70445216541493,0,0,0,11.8530659693891,11.1603201072333,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54094624222463,1.30139853857622,4.63973287666617,4.52293916402742,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31781578203138,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.7755698935059,3.93617574839647,42.2991913063594,3.40035338437484,0.0915694648183434,0.742585499285292,0,0,0,0.580024309752732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,114.326979493124,63.3012373847307,0,0,0,7.17292757703851,1.10513566212459,4.78672220923124,0,0,0,0,0,0,888.678441383135,0,0,105.657269324379,94.159619634279,57.8880014203463,5.98983850496036,0.174919999992391,0.724999575434793,0,0,0.472775363535873,69.9829047680173,14.2886260557795,161.297620293029,3922.06285638368,1215.00911915099,538.613529199304,206.562057551528,252.39766658633,157.299329759398,0,0,572.817724302265,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26164914294305,40.2482869920289,21.8957624837271,32.1100959147121,20.1639947828096,0,0,0.104421949505455,162.167125951509,2.40773294189637,2665.92939235436,0,0,0,694.468549014927,24.1981432097328,58.4598974714236,1.95878396848313,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0,208.2741885445,0,0,0,0,204.452846757588,893.769795004823,292.419078570009,0,0,106.488758797788,1.95551382734803,0,5.97668385270187,0.19980960958213,0,0,0.171594997861965,0,0,0,2.98989253361951,3.34729108199466,0,0,1617.53225778417,295.715618406705,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,1.67958681216816,0,0,0,0,0.0674035438541849,0,0.254019996197353,58.8469970458884,46.7177682962704,0,0.275078873194468,0.83088067605837,0,0,181.15517795423,0,101.18652817217,11.3826456252946,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,137.686348525051,62.0170902173216,0,0,0.533937062838473,0.471612915298998,0.414239055347196,0,0,0,0,0,0.2506898940227,1.53172788381731,0.327872630709804,0.157054096250234,217.972772271879,96.8888543321587,73.3618853940089,417.441894462372,142.432902173318,126.800854806305,0,0,0,0,0,760.575887030376,132.457820150294,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6150797451182,8.7554867079139,0,0,0,0,0,0,0,0,6.79363183754139,0,0,0,0,0,0,0,51.9851719930508,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0,0,31.924986196747,0,0.169732529954025,76.1018213964025,0.371807292777007,0,0,0.0788617450012534,285.803757137913,0,0,1116.62507830195,425.089728976755,91.6298350988048,133.325636756491,19.4095206090723,149.379665322711,60.0689401750486,4.28308260777463,0,0,0,0,0,0,0.198916222116275,5.03909199940024,0,0,0,0,0,210.514651255536,129.658964369899,92.8023716290317,167.607986342496,71.1067251723685,1.09651553371436,179.628446576925,41.3297424245108,0,12.8568440610789,13.1150651665341,7.89055285507621,6.14687916648504,1.06442844195167,0,0,84.010589959364,153.382107948564,0,0,516.09208549213,2099.53562804753,74.2721232781541,44.7447773049653,0.215927591218621,0,705.187584846891,0.790068058663633,0,0,0,0,0,0,2.15113679410139,0,0,555.060422800308,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0.233939463462106,9.35068643258431,0.594600453887843,0.11294608203896,0.329821550236287,10.7183618932338,13.1967810364585,5.90110813360685,0,1205.1491497422,0.235676547101626,76.9529191090585,56.1417696618193,93.8295715235148,0,0.939839179798536,0.966868319603658,0,0,0,0,2.19100916473955,0.917458566809082,29.0979353797446,0,84.9213712484525,34.4717045368898,25.9223151852546,6.32391530883477,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,22.8093881636901,4.01946195234268,2534.77097642549,519.130206230852,10.661699095049,53.326432647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| ||
|short_description=p1@PCP4 | |short_description=p1@PCP4 | ||
}} | }} |
Latest revision as of 11:47, 18 September 2015
Short description: | p1@PCP4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCP4_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000462224, NM_006198, uc002yyp.2_5end |
EntrezGene: | PCP4 |
HGNC: | 8742 |
UniProt: | F6SSA2P48539Q6ICS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data