FFCP PHASE1:Hg19::chr17:8063613..8063632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6844 | |EntrezGene=6844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |HGNC=12643 | ||
|TSSclassifier=strong | |||
|UniProt=Q69Z01 | |UniProt=Q69Z01 | ||
|association_with_transcript=314bp_to_AL050223_5end | |association_with_transcript=314bp_to_AL050223_5end | ||
|cluster_id=chr17:8063613..8063632,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_19_at_VAMP2_5end | |description=CAGE_peak_19_at_VAMP2_5end | ||
|id=chr17:8063613..8063632,- | |id=chr17:8063613..8063632,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.69e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.27e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.36e-09;1!UBERON:0003099;1.36e-09;1!UBERON:0003852;1.36e-09;1!UBERON:0006601;1.30e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.93e-24!57;UBERON:0005068!4.93e-24!57;UBERON:0006241!4.93e-24!57;UBERON:0007135!4.93e-24!57;UBERON:0007023!8.72e-23!115;UBERON:0003080!1.64e-22!42;UBERON:0002780!1.07e-21!41;UBERON:0001890!1.07e-21!41;UBERON:0006240!1.07e-21!41;UBERON:0002616!3.57e-21!59;UBERON:0000955!4.39e-21!69;UBERON:0006238!4.39e-21!69;UBERON:0001017!2.09e-20!82;UBERON:0005743!4.54e-19!86;UBERON:0002020!1.93e-18!34;UBERON:0003528!1.93e-18!34;UBERON:0000073!2.01e-18!94;UBERON:0001016!2.01e-18!94;UBERON:0001893!4.61e-18!34;UBERON:0002791!2.44e-17!33;UBERON:0002346!3.45e-17!90;UBERON:0001869!4.90e-17!32;UBERON:0003075!9.64e-16!86;UBERON:0007284!9.64e-16!86;UBERON:0003056!6.48e-15!61;UBERON:0002619!2.41e-13!22;UBERON:0000956!3.24e-12!25;UBERON:0000203!3.24e-12!25;UBERON:0001950!7.47e-12!20;UBERON:0000033!1.65e-10!123;UBERON:0000924!9.54e-10!173;UBERON:0006601!9.54e-10!173;UBERON:0000153!3.82e-09!129;UBERON:0007811!3.82e-09!129;UBERON:0004121!9.10e-09!169;UBERON:0002308!5.60e-08!9;UBERON:0000125!5.60e-08!9 | |ontology_enrichment_uberon=UBERON:0001049!4.93e-24!57;UBERON:0005068!4.93e-24!57;UBERON:0006241!4.93e-24!57;UBERON:0007135!4.93e-24!57;UBERON:0007023!8.72e-23!115;UBERON:0003080!1.64e-22!42;UBERON:0002780!1.07e-21!41;UBERON:0001890!1.07e-21!41;UBERON:0006240!1.07e-21!41;UBERON:0002616!3.57e-21!59;UBERON:0000955!4.39e-21!69;UBERON:0006238!4.39e-21!69;UBERON:0001017!2.09e-20!82;UBERON:0005743!4.54e-19!86;UBERON:0002020!1.93e-18!34;UBERON:0003528!1.93e-18!34;UBERON:0000073!2.01e-18!94;UBERON:0001016!2.01e-18!94;UBERON:0001893!4.61e-18!34;UBERON:0002791!2.44e-17!33;UBERON:0002346!3.45e-17!90;UBERON:0001869!4.90e-17!32;UBERON:0003075!9.64e-16!86;UBERON:0007284!9.64e-16!86;UBERON:0003056!6.48e-15!61;UBERON:0002619!2.41e-13!22;UBERON:0000956!3.24e-12!25;UBERON:0000203!3.24e-12!25;UBERON:0001950!7.47e-12!20;UBERON:0000033!1.65e-10!123;UBERON:0000924!9.54e-10!173;UBERON:0006601!9.54e-10!173;UBERON:0000153!3.82e-09!129;UBERON:0007811!3.82e-09!129;UBERON:0004121!9.10e-09!169;UBERON:0002308!5.60e-08!9;UBERON:0000125!5.60e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.64e-17;22!UBERON:0000956;3.19e-15;25!UBERON:0000203;3.19e-15;25!UBERON:0001950;3.64e-14;20!UBERON:0002791;7.74e-14;32!UBERON:0002780;5.08e-13;41!UBERON:0001890;5.08e-13;41!UBERON:0003528;1.72e-12;34!UBERON:0002020;1.72e-12;34!UBERON:0000955;5.40e-12;68!UBERON:0001869;9.39e-12;32!UBERON:0001893;1.87e-11;34!UBERON:0000073;1.88e-10;53!UBERON:0002616;1.88e-10;53!UBERON:0002426;5.53e-10;1!UBERON:0003831;5.53e-10;1!UBERON:0003898;5.53e-10;1!UBERON:0004830;5.53e-10;1!UBERON:0003830;5.53e-10;1!UBERON:0005175;5.53e-10;1!UBERON:0001774;5.53e-10;1!UBERON:0001103;5.53e-10;1!UBERON:0002038;1.36e-09;1!UBERON:0003112;1.36e-09;1!UBERON:0000941;1.36e-09;1!UBERON:0005705;1.36e-09;1!UBERON:0001785;1.36e-09;1!UBERON:0002464;1.36e-09;1!UBERON:0004904;1.36e-09;1!UBERON:0008193;1.36e-09;1!UBERON:0011158;1.36e-09;1!UBERON:0001021;1.36e-09;1!UBERON:0009661;1.36e-09;1!UBERON:0010912;1.36e-09;1!UBERON:0002514;1.36e-09;1!UBERON:0003457;1.36e-09;1!UBERON:0002950;1.36e-09;1!UBERON:0008907;1.36e-09;1!UBERON:0008001;1.36e-09;1!UBERON:0007213;1.36e-09;1!UBERON:0009891;1.36e-09;1!UBERON:0007914;1.36e-09;1!UBERON:0007375;1.36e-09;1!UBERON:0003323;1.36e-09;1!UBERON:0010258;1.36e-09;1!UBERON:0005253;1.36e-09;1!UBERON:0007842;1.36e-09;1!UBERON:0003128;1.36e-09;1!UBERON:0001891;1.36e-09;1!UBERON:0002397;1.36e-09;1!UBERON:0003113;1.36e-09;1!UBERON:0003277;1.36e-09;1!UBERON:0001703;1.36e-09;1!UBERON:0002241;1.36e-09;1!UBERON:0001709;1.36e-09;1!UBERON:0002244;1.36e-09;1!UBERON:0005620;1.36e-09;1!UBERON:0010364;1.36e-09;1!UBERON:0004288;1.36e-09;1!UBERON:0003296;2.22e-09;4!UBERON:0010133;2.22e-09;4!UBERON:0001017;1.40e-08;75!UBERON:0002021;1.13e-07;5!UBERON:0001016;1.15e-07;83!UBERON:0011159;1.60e-07;5!UBERON:0000200;9.73e-07;6 | |||
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| ||
|short_description=p19@VAMP2 | |short_description=p19@VAMP2 | ||
}} | }} |
Latest revision as of 13:26, 18 September 2015
Short description: | p19@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_VAMP2_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 314bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.27e-12 | 3 |