FFCP PHASE1:Hg19::chr7:78400598..78400654,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:78400598..78400654,- to FFCP PHASE1:Hg19::chr7:78400598..78400654,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9863 | |EntrezGene=9863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18957 | |HGNC=18957 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWK7 | |UniProt=F5GWK7 | ||
|association_with_transcript=0bp_to_ENST00000536571,uc011kgr.1,uc011kgs.1_5end | |||
|cluster_id=chr7:78400598..78400654,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_MAGI2_5end | |||
|id=chr7:78400598..78400654,- | |||
|ontology_enrichment_celltype=CL:0000047!2.30e-11!8;CL:0000540!5.08e-09!6;CL:0000031!5.08e-09!6;CL:0000404!5.08e-09!6;CL:0002322!3.71e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.23e-13;6!CL:0000404;2.23e-13;6!CL:0002322;4.88e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.48e-17,8;CL:0000540,2.29e-13,6;CL:0000031,2.29e-13,6;CL:0000404,2.29e-13,6;CL:0002322,5.30e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.74e-17;82!CL:0000031;2.23e-13;6!UBERON:0006241;8.38e-07;3!UBERON:0003057;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.12e-58!82;UBERON:0000073!1.34e-57!94;UBERON:0001016!1.34e-57!94;UBERON:0005743!5.07e-56!86;UBERON:0001049!1.14e-55!57;UBERON:0005068!1.14e-55!57;UBERON:0006241!1.14e-55!57;UBERON:0007135!1.14e-55!57;UBERON:0007023!4.98e-52!115;UBERON:0002780!1.60e-49!41;UBERON:0001890!1.60e-49!41;UBERON:0006240!1.60e-49!41;UBERON:0003080!5.13e-48!42;UBERON:0002616!2.57e-46!59;UBERON:0000955!1.63e-42!69;UBERON:0006238!1.63e-42!69;UBERON:0003075!1.64e-41!86;UBERON:0007284!1.64e-41!86;UBERON:0001893!1.26e-40!34;UBERON:0002020!1.30e-40!34;UBERON:0003528!1.30e-40!34;UBERON:0002346!1.80e-40!90;UBERON:0002791!3.04e-39!33;UBERON:0001869!2.11e-38!32;UBERON:0003056!2.26e-33!61;UBERON:0004121!8.29e-31!169;UBERON:0002619!1.20e-30!22;UBERON:0000924!1.21e-30!173;UBERON:0006601!1.21e-30!173;UBERON:0000956!2.05e-28!25;UBERON:0000203!2.05e-28!25;UBERON:0001950!7.38e-28!20;UBERON:0000153!3.31e-26!129;UBERON:0007811!3.31e-26!129;UBERON:0000033!3.84e-25!123;UBERON:0002420!4.70e-14!9;UBERON:0007245!4.70e-14!9;UBERON:0010009!4.70e-14!9;UBERON:0010011!4.70e-14!9;UBERON:0000454!4.70e-14!9;UBERON:0002308!1.28e-13!9;UBERON:0000125!1.28e-13!9;UBERON:0009663!3.36e-11!7;UBERON:0004111!1.57e-10!241;UBERON:0000025!2.63e-10!194;UBERON:0001894!3.90e-10!7;UBERON:0006222!3.90e-10!7;UBERON:0001871!4.55e-10!7;UBERON:0000200!4.70e-10!6;UBERON:0003076!2.05e-09!15;UBERON:0003057!2.05e-09!15;UBERON:0000349!1.08e-08!5;UBERON:0001872!1.51e-08!5;UBERON:0000477!1.61e-08!286;UBERON:0002021!2.09e-08!5;UBERON:0000475!6.29e-08!365;UBERON:0000369!1.35e-07!4;UBERON:0002435!1.35e-07!4;UBERON:0000204!1.35e-07!4;UBERON:0010082!1.35e-07!4;UBERON:0004732!1.74e-07!13;UBERON:0000468!1.81e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.67e-53;41!UBERON:0001890;1.67e-53;41!UBERON:0001893;8.80e-52;34!UBERON:0003528;2.72e-51;34!UBERON:0002020;2.72e-51;34!UBERON:0001869;4.62e-51;32!UBERON:0002791;9.57e-51;32!UBERON:0002619;5.11e-48;22!UBERON:0000073;1.62e-44;53!UBERON:0002616;1.62e-44;53!UBERON:0001950;1.39e-43;20!UBERON:0000956;1.15e-41;25!UBERON:0000203;1.15e-41;25!UBERON:0001017;3.36e-31;75!UBERON:0000955;1.19e-29;68!UBERON:0001016;4.95e-27;83!UBERON:0002420;2.55e-21;9!UBERON:0007245;2.55e-21;9!UBERON:0010009;2.55e-21;9!UBERON:0010011;2.55e-21;9!UBERON:0000454;2.55e-21;9!UBERON:0000125;1.17e-20;9!UBERON:0002308;1.17e-20;9!UBERON:0009663;8.43e-17;7!UBERON:0001894;4.08e-15;7!UBERON:0000200;5.36e-15;6!UBERON:0007023;4.75e-13;114!UBERON:0001871;5.28e-13;6!UBERON:0000349;8.09e-13;5!UBERON:0001872;1.32e-12;5!UBERON:0002021;2.02e-12;5!UBERON:0000369;4.27e-11;4!UBERON:0002435;4.27e-11;4!UBERON:0000204;4.27e-11;4!UBERON:0011216;1.16e-10;132!UBERON:0004732;2.48e-09;13!UBERON:0002784;2.80e-09;4!UBERON:0003296;3.41e-09;4!UBERON:0010133;3.41e-09;4!UBERON:0002298;6.55e-09;6!UBERON:0005383;7.65e-09;3!UBERON:0005382;7.65e-09;3!UBERON:0001870;2.57e-08;3!UBERON:0004733;7.04e-08;12!UBERON:0002028;7.04e-08;12!UBERON:0000988;3.56e-07;3!UBERON:0002240;8.38e-07;3!UBERON:0005174;8.38e-07;3!UBERON:0001137;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.59e-89,81;UBERON:0001049,6.84e-85,56;UBERON:0005068,6.84e-85,56;UBERON:0006241,6.84e-85,56;UBERON:0007135,6.84e-85,56;UBERON:0001016,3.05e-84,89;UBERON:0000073,2.72e-79,53;UBERON:0002616,2.72e-79,53;UBERON:0002780,3.90e-75,41;UBERON:0001890,3.90e-75,41;UBERON:0003080,3.90e-75,41;UBERON:0006240,3.90e-75,41;UBERON:0000955,3.52e-67,68;UBERON:0006238,3.52e-67,68;UBERON:0001893,5.25e-61,34;UBERON:0003528,5.48e-61,34;UBERON:0002020,5.48e-61,34;UBERON:0001869,1.80e-57,32;UBERON:0002791,5.46e-57,32;UBERON:0003075,2.68e-56,82;UBERON:0007284,2.68e-56,82;UBERON:0002346,2.16e-55,86;UBERON:0003056,1.03e-49,61;UBERON:0002619,4.81e-48,22;UBERON:0001950,1.32e-43,20;UBERON:0010371,1.65e-43,104;UBERON:0000956,1.09e-41,25;UBERON:0000203,1.09e-41,25;UBERON:0007023,2.07e-40,114;UBERON:0004121,1.56e-39,171;UBERON:0000924,1.56e-39,171;UBERON:0006601,1.56e-39,171;UBERON:0010314,1.92e-34,132;UBERON:0011216,2.87e-31,223;UBERON:0002420,2.44e-21,9;UBERON:0007245,2.44e-21,9;UBERON:0010009,2.44e-21,9;UBERON:0010011,2.44e-21,9;UBERON:0000454,2.44e-21,9;UBERON:0000125,1.20e-20,9;UBERON:0002308,1.20e-20,9;UBERON:0000025,3.51e-18,192;UBERON:0009663,8.15e-17,7;UBERON:0001894,3.96e-15,7;UBERON:0006222,3.96e-15,7;UBERON:0000200,5.31e-15,6;UBERON:0004111,2.26e-13,240;UBERON:0001871,5.23e-13,6;UBERON:0000349,7.55e-13,5;UBERON:0001872,1.27e-12,5;UBERON:0002021,2.14e-12,5;UBERON:0003076,2.34e-12,15;UBERON:0003057,2.34e-12,15;UBERON:0000369,4.07e-11,4;UBERON:0002435,4.07e-11,4;UBERON:0000204,4.07e-11,4;UBERON:0010082,4.07e-11,4;UBERON:0004732,1.97e-09,13;UBERON:0002784,2.77e-09,4;UBERON:0003296,3.23e-09,4;UBERON:0010133,3.23e-09,4;UBERON:0002298,5.06e-09,6;UBERON:0005383,7.66e-09,3;UBERON:0005382,7.66e-09,3;UBERON:0000483,8.84e-09,306;UBERON:0000119,1.43e-08,309;UBERON:0000922,2.41e-08,592;UBERON:0001870,2.42e-08,3;UBERON:0004733,5.87e-08,12;UBERON:0002028,5.87e-08,12;UBERON:0007277,5.87e-08,12;UBERON:0000988,2.95e-07,3;UBERON:0002240,7.38e-07,3;UBERON:0005174,7.38e-07,3;UBERON:0001137,7.38e-07,3 | |||
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|short_description=p6@MAGI2 | |||
}} | }} |
Latest revision as of 15:28, 19 September 2015
Short description: | p6@MAGI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAGI2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000536571, uc011kgr.1, uc011kgs.1_5end |
EntrezGene: | MAGI2 |
HGNC: | 18957 |
UniProt: | F5GWK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.48e-17 | 8 |
neuron | 2.29e-13 | 6 |
neuroblast | 2.29e-13 | 6 |
electrically signaling cell | 2.29e-13 | 6 |
embryonic stem cell | 5.30e-12 | 5 |