FFCP PHASE1:Hg19::chr22:29884834..29884866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4744 | |EntrezGene=4744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7737 | |HGNC=7737 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-398bp_to_uc003afp.2_5end | |association_with_transcript=-398bp_to_uc003afp.2_5end | ||
|cluster_id=chr22:29884834..29884866,+ | |||
|coexpression_cluster_id=C261 | |coexpression_cluster_id=C261 | ||
|description=CAGE_peak_2_at_NEFH_5end | |description=CAGE_peak_2_at_NEFH_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.75e-21;2!CL:0000242;5.75e-21;2!CL:0000312;5.95e-09;5!CL:0000240;1.34e-07;6!CL:0000311;1.34e-07;6!CL:0000079;1.34e-07;6!CL:0000237;1.34e-07;6 | |ontology_enrichment_celltype_v019=CL:0000123;5.75e-21;2!CL:0000242;5.75e-21;2!CL:0000312;5.95e-09;5!CL:0000240;1.34e-07;6!CL:0000311;1.34e-07;6!CL:0000079;1.34e-07;6!CL:0000237;1.34e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.20e-21,2;CL:0000312,5.72e-09,5;CL:0000240,1.29e-07,6;CL:0000311,1.29e-07,6;CL:0000079,1.29e-07,6;CL:0000237,1.29e-07,6;CL:0000036,1.29e-07,6;CL:0000357,1.29e-07,6;CL:0000114,1.29e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.12e-14;3!UBERON:0003057;2.12e-14;3!UBERON:0006601;2.65e-14;82!UBERON:0006222;1.69e-11;1!CL:0000357;1.34e-07;6!CL:0000114;1.34e-07;6 | |ontology_enrichment_development_v019=UBERON:0006241;2.12e-14;3!UBERON:0003057;2.12e-14;3!UBERON:0006601;2.65e-14;82!UBERON:0006222;1.69e-11;1!CL:0000357;1.34e-07;6!CL:0000114;1.34e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.66e-41!57;UBERON:0005068!2.66e-41!57;UBERON:0006241!2.66e-41!57;UBERON:0007135!2.66e-41!57;UBERON:0002346!1.20e-32!90;UBERON:0002616!2.45e-32!59;UBERON:0001017!1.56e-31!82;UBERON:0003075!2.51e-31!86;UBERON:0007284!2.51e-31!86;UBERON:0000073!2.96e-30!94;UBERON:0001016!2.96e-30!94;UBERON:0005743!1.69e-29!86;UBERON:0000955!2.06e-29!69;UBERON:0006238!2.06e-29!69;UBERON:0002780!9.86e-28!41;UBERON:0001890!9.86e-28!41;UBERON:0006240!9.86e-28!41;UBERON:0003080!6.89e-27!42;UBERON:0007023!1.91e-25!115;UBERON:0002020!1.69e-24!34;UBERON:0003528!1.69e-24!34;UBERON:0001893!7.39e-22!34;UBERON:0001869!1.88e-21!32;UBERON:0000924!2.38e-21!173;UBERON:0006601!2.38e-21!173;UBERON:0002619!2.39e-21!22;UBERON:0002791!2.17e-20!33;UBERON:0004121!3.66e-20!169;UBERON:0001950!2.18e-18!20;UBERON:0000956!2.67e-18!25;UBERON:0000203!2.67e-18!25;UBERON:0000033!1.48e-17!123;UBERON:0003056!1.96e-17!61;UBERON:0000153!3.33e-17!129;UBERON:0007811!3.33e-17!129;UBERON:0003076!1.07e-15!15;UBERON:0003057!1.07e-15!15;UBERON:0000200!4.72e-13!6;UBERON:0002298!1.20e-12!8;UBERON:0004733!1.36e-10!12;UBERON:0002028!1.36e-10!12;UBERON:0007277!1.36e-10!12;UBERON:0004732!1.22e-09!13;UBERON:0000483!2.12e-09!309;UBERON:0000119!3.68e-09!312;UBERON:0000025!4.46e-09!194;UBERON:0000922!2.18e-08!612;UBERON:0004111!6.81e-08!241;UBERON:0000475!7.91e-08!365;UBERON:0000923!8.25e-08!604;UBERON:0005291!8.25e-08!604;UBERON:0006598!8.25e-08!604;UBERON:0002532!8.25e-08!604;UBERON:0002050!9.29e-08!605;UBERON:0005423!9.29e-08!605;UBERON:0000988!1.18e-07!3;UBERON:0002308!1.23e-07!9;UBERON:0000125!1.23e-07!9;UBERON:0002771!1.91e-07!3;UBERON:0001894!2.07e-07!7;UBERON:0006222!2.07e-07!7;UBERON:0002240!2.16e-07!3;UBERON:0001896!2.40e-07!3;UBERON:0005290!2.40e-07!3;UBERON:0010096!2.40e-07!3;UBERON:0001872!3.05e-07!5;UBERON:0006331!5.29e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.66e-41!57;UBERON:0005068!2.66e-41!57;UBERON:0006241!2.66e-41!57;UBERON:0007135!2.66e-41!57;UBERON:0002346!1.20e-32!90;UBERON:0002616!2.45e-32!59;UBERON:0001017!1.56e-31!82;UBERON:0003075!2.51e-31!86;UBERON:0007284!2.51e-31!86;UBERON:0000073!2.96e-30!94;UBERON:0001016!2.96e-30!94;UBERON:0005743!1.69e-29!86;UBERON:0000955!2.06e-29!69;UBERON:0006238!2.06e-29!69;UBERON:0002780!9.86e-28!41;UBERON:0001890!9.86e-28!41;UBERON:0006240!9.86e-28!41;UBERON:0003080!6.89e-27!42;UBERON:0007023!1.91e-25!115;UBERON:0002020!1.69e-24!34;UBERON:0003528!1.69e-24!34;UBERON:0001893!7.39e-22!34;UBERON:0001869!1.88e-21!32;UBERON:0000924!2.38e-21!173;UBERON:0006601!2.38e-21!173;UBERON:0002619!2.39e-21!22;UBERON:0002791!2.17e-20!33;UBERON:0004121!3.66e-20!169;UBERON:0001950!2.18e-18!20;UBERON:0000956!2.67e-18!25;UBERON:0000203!2.67e-18!25;UBERON:0000033!1.48e-17!123;UBERON:0003056!1.96e-17!61;UBERON:0000153!3.33e-17!129;UBERON:0007811!3.33e-17!129;UBERON:0003076!1.07e-15!15;UBERON:0003057!1.07e-15!15;UBERON:0000200!4.72e-13!6;UBERON:0002298!1.20e-12!8;UBERON:0004733!1.36e-10!12;UBERON:0002028!1.36e-10!12;UBERON:0007277!1.36e-10!12;UBERON:0004732!1.22e-09!13;UBERON:0000483!2.12e-09!309;UBERON:0000119!3.68e-09!312;UBERON:0000025!4.46e-09!194;UBERON:0000922!2.18e-08!612;UBERON:0004111!6.81e-08!241;UBERON:0000475!7.91e-08!365;UBERON:0000923!8.25e-08!604;UBERON:0005291!8.25e-08!604;UBERON:0006598!8.25e-08!604;UBERON:0002532!8.25e-08!604;UBERON:0002050!9.29e-08!605;UBERON:0005423!9.29e-08!605;UBERON:0000988!1.18e-07!3;UBERON:0002308!1.23e-07!9;UBERON:0000125!1.23e-07!9;UBERON:0002771!1.91e-07!3;UBERON:0001894!2.07e-07!7;UBERON:0006222!2.07e-07!7;UBERON:0002240!2.16e-07!3;UBERON:0001896!2.40e-07!3;UBERON:0005290!2.40e-07!3;UBERON:0010096!2.40e-07!3;UBERON:0001872!3.05e-07!5;UBERON:0006331!5.29e-07!3 | ||
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|short_description=p2@NEFH | |short_description=p2@NEFH | ||
}} | }} |
Latest revision as of 15:47, 19 September 2015
Short description: | p2@NEFH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEFH_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | -398bp_to_uc003afp.2_5end |
EntrezGene: | NEFH |
HGNC: | 7737 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.20e-21 | 2 |
keratinocyte | 5.72e-09 | 5 |
stratified squamous epithelial cell | 1.29e-07 | 6 |
keratin accumulating cell | 1.29e-07 | 6 |
stratified epithelial cell | 1.29e-07 | 6 |
keratinizing barrier epithelial cell | 1.29e-07 | 6 |
epithelial fate stem cell | 1.29e-07 | 6 |
stratified epithelial stem cell | 1.29e-07 | 6 |
surface ectodermal cell | 1.29e-07 | 6 |