FFCP PHASE1:Hg19::chr14:29236301..29236317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2290 | |EntrezGene=2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |HGNC=3811 | ||
|TSSclassifier=strong | |||
|UniProt=P55316 | |UniProt=P55316 | ||
|association_with_transcript=14bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | |association_with_transcript=14bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | ||
|cluster_id=chr14:29236301..29236317,+ | |||
|coexpression_cluster_id=C214 | |coexpression_cluster_id=C214 | ||
|description=CAGE_peak_5_at_FOXG1_5end | |description=CAGE_peak_5_at_FOXG1_5end | ||
|id=chr14:29236301..29236317,+ | |id=chr14:29236301..29236317,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.83e-14!25;CL:0000128!1.04e-13!7;CL:0000126!1.04e-13!7;CL:0000127!1.04e-13!7;CL:0002453!1.04e-13!7;CL:0000243!4.93e-10!15;CL:0000125!4.93e-10!15;CL:0000030!4.93e-10!15;CL:0000339!4.93e-10!15;CL:0000133!6.07e-09!59;CL:0000095!9.93e-09!17;CL:0000123!9.93e-09!17;CL:0000306!4.13e-08!4;CL:0002222!4.13e-08!4;CL:0002224!4.13e-08!4;CL:0002605!2.17e-07!3;CL:0000221!2.60e-07!71;CL:0000047!5.12e-07!8 | |ontology_enrichment_celltype=CL:0002319!5.83e-14!25;CL:0000128!1.04e-13!7;CL:0000126!1.04e-13!7;CL:0000127!1.04e-13!7;CL:0002453!1.04e-13!7;CL:0000243!4.93e-10!15;CL:0000125!4.93e-10!15;CL:0000030!4.93e-10!15;CL:0000339!4.93e-10!15;CL:0000133!6.07e-09!59;CL:0000095!9.93e-09!17;CL:0000123!9.93e-09!17;CL:0000306!4.13e-08!4;CL:0002222!4.13e-08!4;CL:0002224!4.13e-08!4;CL:0002605!2.17e-07!3;CL:0000221!2.60e-07!71;CL:0000047!5.12e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.26e-20;25!CL:0000128;4.62e-13;7!CL:0000126;4.62e-13;7!CL:0000127;4.62e-13;7!CL:0000243;3.06e-12;15!CL:0000125;3.06e-12;15!CL:0002605;5.91e-12;3!CL:0000095;8.30e-11;17!CL:0000064;1.67e-10;3!CL:0000067;1.67e-10;3!CL:0005012;1.67e-10;3!CL:0002304;1.67e-10;3!CL:0000047;6.11e-09;2!CL:0000306;3.24e-08;4!CL:0002222;3.24e-08;4!CL:0002224;3.24e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.61e-20,25;CL:0000128,4.63e-13,7;CL:0000126,4.63e-13,7;CL:0000127,4.63e-13,7;CL:0002453,4.63e-13,7;CL:0000133,7.74e-13,59;CL:0000243,3.37e-12,15;CL:0000125,3.37e-12,15;CL:0000030,3.37e-12,15;CL:0000339,3.37e-12,15;CL:0000047,4.78e-12,8;CL:0002605,6.03e-12,3;CL:0000095,9.02e-11,17;CL:0000123,9.02e-11,17;CL:0000064,1.43e-10,3;CL:0000067,1.43e-10,3;CL:0005012,1.43e-10,3;CL:0002304,1.43e-10,3;CL:0000221,7.08e-10,72;CL:0000306,3.41e-08,4;CL:0002222,3.41e-08,4;CL:0002224,3.41e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000339;3.06e-12;15!UBERON:0006238;4.47e-11;10!UBERON:0010122;2.27e-08;2!UBERON:0006601;2.62e-08;82!CL:0000133;1.70e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!9.83e-50!32;UBERON:0001893!1.58e-49!34;UBERON:0002780!3.53e-48!41;UBERON:0001890!3.53e-48!41;UBERON:0006240!3.53e-48!41;UBERON:0001017!4.04e-48!82;UBERON:0002791!7.54e-48!33;UBERON:0003056!5.90e-47!61;UBERON:0003080!8.61e-47!42;UBERON:0005743!3.34e-45!86;UBERON:0002020!4.39e-43!34;UBERON:0003528!4.39e-43!34;UBERON:0000955!1.00e-41!69;UBERON:0006238!1.00e-41!69;UBERON:0003075!3.56e-40!86;UBERON:0007284!3.56e-40!86;UBERON:0000073!1.58e-39!94;UBERON:0001016!1.58e-39!94;UBERON:0002346!1.94e-39!90;UBERON:0001049!3.32e-38!57;UBERON:0005068!3.32e-38!57;UBERON:0006241!3.32e-38!57;UBERON:0007135!3.32e-38!57;UBERON:0000956!3.17e-37!25;UBERON:0000203!3.17e-37!25;UBERON:0002616!1.58e-36!59;UBERON:0000153!1.06e-32!129;UBERON:0007811!1.06e-32!129;UBERON:0002619!1.50e-31!22;UBERON:0000033!8.38e-31!123;UBERON:0001950!4.63e-28!20;UBERON:0000924!3.31e-27!173;UBERON:0006601!3.31e-27!173;UBERON:0004121!3.63e-27!169;UBERON:0002420!5.34e-14!9;UBERON:0007245!5.34e-14!9;UBERON:0010009!5.34e-14!9;UBERON:0010011!5.34e-14!9;UBERON:0000454!5.34e-14!9;UBERON:0001871!3.57e-12!7;UBERON:0000064!5.43e-12!219;UBERON:0007023!6.31e-12!115;UBERON:0000025!2.61e-11!194;UBERON:0000349!9.81e-11!5;UBERON:0009663!2.04e-10!7;UBERON:0001872!2.07e-10!5;UBERON:0007625!3.31e-10!11;UBERON:0000483!8.58e-10!309;UBERON:0000119!1.51e-09!312;UBERON:0000369!4.23e-09!4;UBERON:0002435!4.23e-09!4;UBERON:0000204!4.23e-09!4;UBERON:0010082!4.23e-09!4;UBERON:0000475!7.58e-09!365;UBERON:0000200!2.76e-08!6;UBERON:0000488!3.29e-08!4;UBERON:0010077!4.13e-08!4;UBERON:0005389!4.13e-08!4;UBERON:0000484!4.13e-08!4;UBERON:0002546!4.13e-08!4;UBERON:0000965!4.13e-08!4;UBERON:0001803!4.13e-08!4;UBERON:0003073!4.13e-08!4;UBERON:0005426!4.13e-08!4;UBERON:0000477!6.89e-08!286;UBERON:0002308!6.94e-08!9;UBERON:0000125!6.94e-08!9;UBERON:0001801!1.12e-07!14;UBERON:0004111!3.31e-07!241;UBERON:0005383!3.33e-07!3;UBERON:0005382!3.33e-07!3;UBERON:0002021!5.68e-07!5 | |ontology_enrichment_uberon=UBERON:0001869!9.83e-50!32;UBERON:0001893!1.58e-49!34;UBERON:0002780!3.53e-48!41;UBERON:0001890!3.53e-48!41;UBERON:0006240!3.53e-48!41;UBERON:0001017!4.04e-48!82;UBERON:0002791!7.54e-48!33;UBERON:0003056!5.90e-47!61;UBERON:0003080!8.61e-47!42;UBERON:0005743!3.34e-45!86;UBERON:0002020!4.39e-43!34;UBERON:0003528!4.39e-43!34;UBERON:0000955!1.00e-41!69;UBERON:0006238!1.00e-41!69;UBERON:0003075!3.56e-40!86;UBERON:0007284!3.56e-40!86;UBERON:0000073!1.58e-39!94;UBERON:0001016!1.58e-39!94;UBERON:0002346!1.94e-39!90;UBERON:0001049!3.32e-38!57;UBERON:0005068!3.32e-38!57;UBERON:0006241!3.32e-38!57;UBERON:0007135!3.32e-38!57;UBERON:0000956!3.17e-37!25;UBERON:0000203!3.17e-37!25;UBERON:0002616!1.58e-36!59;UBERON:0000153!1.06e-32!129;UBERON:0007811!1.06e-32!129;UBERON:0002619!1.50e-31!22;UBERON:0000033!8.38e-31!123;UBERON:0001950!4.63e-28!20;UBERON:0000924!3.31e-27!173;UBERON:0006601!3.31e-27!173;UBERON:0004121!3.63e-27!169;UBERON:0002420!5.34e-14!9;UBERON:0007245!5.34e-14!9;UBERON:0010009!5.34e-14!9;UBERON:0010011!5.34e-14!9;UBERON:0000454!5.34e-14!9;UBERON:0001871!3.57e-12!7;UBERON:0000064!5.43e-12!219;UBERON:0007023!6.31e-12!115;UBERON:0000025!2.61e-11!194;UBERON:0000349!9.81e-11!5;UBERON:0009663!2.04e-10!7;UBERON:0001872!2.07e-10!5;UBERON:0007625!3.31e-10!11;UBERON:0000483!8.58e-10!309;UBERON:0000119!1.51e-09!312;UBERON:0000369!4.23e-09!4;UBERON:0002435!4.23e-09!4;UBERON:0000204!4.23e-09!4;UBERON:0010082!4.23e-09!4;UBERON:0000475!7.58e-09!365;UBERON:0000200!2.76e-08!6;UBERON:0000488!3.29e-08!4;UBERON:0010077!4.13e-08!4;UBERON:0005389!4.13e-08!4;UBERON:0000484!4.13e-08!4;UBERON:0002546!4.13e-08!4;UBERON:0000965!4.13e-08!4;UBERON:0001803!4.13e-08!4;UBERON:0003073!4.13e-08!4;UBERON:0005426!4.13e-08!4;UBERON:0000477!6.89e-08!286;UBERON:0002308!6.94e-08!9;UBERON:0000125!6.94e-08!9;UBERON:0001801!1.12e-07!14;UBERON:0004111!3.31e-07!241;UBERON:0005383!3.33e-07!3;UBERON:0005382!3.33e-07!3;UBERON:0002021!5.68e-07!5 | ||
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|short_description=p5@FOXG1 | |short_description=p5@FOXG1 | ||
}} | }} |
Latest revision as of 16:27, 19 September 2015
Short description: | p5@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXG1_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 14bp_to_ENST00000313071, NM_005249, uc001wqe.2_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.61e-20 | 25 |
oligodendrocyte | 4.63e-13 | 7 |
macroglial cell | 4.63e-13 | 7 |
astrocyte | 4.63e-13 | 7 |
oligodendrocyte precursor cell | 4.63e-13 | 7 |
neurectodermal cell | 7.74e-13 | 59 |
glial cell (sensu Vertebrata) | 3.37e-12 | 15 |
glial cell | 3.37e-12 | 15 |
glioblast | 3.37e-12 | 15 |
glioblast (sensu Vertebrata) | 3.37e-12 | 15 |
neuronal stem cell | 4.78e-12 | 8 |
astrocyte of the cerebral cortex | 6.03e-12 | 3 |
neuron associated cell | 9.02e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 9.02e-11 | 17 |
ciliated cell | 1.43e-10 | 3 |
ciliated epithelial cell | 1.43e-10 | 3 |
multi-ciliated epithelial cell | 1.43e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.43e-10 | 3 |
ectodermal cell | 7.08e-10 | 72 |
crystallin accumulating cell | 3.41e-08 | 4 |
vertebrate lens cell | 3.41e-08 | 4 |
lens epithelial cell | 3.41e-08 | 4 |