FFCP PHASE1:Hg19::chr6:111894900..111894919,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:111894900..111894919,- to FFCP PHASE1:Hg19::chr6:111894900..111894919,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10758 | |EntrezGene=10758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1343 | |HGNC=1343 | ||
|TSSclassifier=strong | |||
|UniProt=O43734 | |UniProt=O43734 | ||
|association_with_transcript=-2bp_to_NM_001164282,uc003pvd.2_5end | |||
|cluster_id=chr6:111894900..111894919,- | |||
|coexpression_cluster_id=C1942 | |||
|description=CAGE_peak_13_at_TRAF3IP2_5end | |||
|id=chr6:111894900..111894919,- | |||
|ontology_enrichment_celltype=CL:0002605!2.19e-08!3;CL:0000148!5.78e-07!10;CL:0000541!5.78e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002605;9.12e-26;3!CL:0000047;2.05e-18;2!CL:0000128;2.19e-11;7!CL:0000126;2.19e-11;7!CL:0000127;2.19e-11;7!CL:0002319;6.12e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.81e-26,3;CL:0000128,1.94e-11,7;CL:0000126,1.94e-11,7;CL:0000127,1.94e-11,7;CL:0002453,1.94e-11,7;CL:0002319,5.76e-11,25;CL:0000047,2.27e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.45e-25;3!UBERON:0003057;1.45e-25;3!UBERON:0005425;1.42e-09;1!UBERON:0006601;1.78e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.24e-64!57;UBERON:0005068!6.24e-64!57;UBERON:0006241!6.24e-64!57;UBERON:0007135!6.24e-64!57;UBERON:0001017!1.87e-57!82;UBERON:0000073!1.87e-56!94;UBERON:0001016!1.87e-56!94;UBERON:0005743!2.29e-56!86;UBERON:0002616!1.06e-51!59;UBERON:0002020!2.07e-48!34;UBERON:0003528!2.07e-48!34;UBERON:0001893!3.04e-48!34;UBERON:0002780!5.41e-48!41;UBERON:0001890!5.41e-48!41;UBERON:0006240!5.41e-48!41;UBERON:0003080!1.22e-46!42;UBERON:0003075!1.84e-46!86;UBERON:0007284!1.84e-46!86;UBERON:0002791!2.92e-46!33;UBERON:0000955!2.63e-44!69;UBERON:0006238!2.63e-44!69;UBERON:0001869!4.89e-44!32;UBERON:0002346!8.53e-44!90;UBERON:0007023!3.83e-34!115;UBERON:0003056!3.50e-33!61;UBERON:0000956!3.46e-30!25;UBERON:0000203!3.46e-30!25;UBERON:0004121!1.00e-28!169;UBERON:0000924!1.04e-27!173;UBERON:0006601!1.04e-27!173;UBERON:0000033!8.28e-25!123;UBERON:0000153!2.33e-24!129;UBERON:0007811!2.33e-24!129;UBERON:0002619!4.49e-24!22;UBERON:0002308!1.85e-20!9;UBERON:0000125!1.85e-20!9;UBERON:0001950!4.27e-20!20;UBERON:0003076!1.13e-17!15;UBERON:0003057!1.13e-17!15;UBERON:0009663!5.13e-16!7;UBERON:0002420!1.16e-15!9;UBERON:0007245!1.16e-15!9;UBERON:0010009!1.16e-15!9;UBERON:0010011!1.16e-15!9;UBERON:0000454!1.16e-15!9;UBERON:0002298!4.10e-14!8;UBERON:0004732!1.18e-13!13;UBERON:0000025!1.79e-12!194;UBERON:0004733!9.37e-12!12;UBERON:0002028!9.37e-12!12;UBERON:0007277!9.37e-12!12;UBERON:0000369!5.50e-10!4;UBERON:0002435!5.50e-10!4;UBERON:0000204!5.50e-10!4;UBERON:0010082!5.50e-10!4;UBERON:0000483!7.21e-10!309;UBERON:0000119!1.23e-09!312;UBERON:0000064!2.81e-09!219;UBERON:0004111!6.39e-09!241;UBERON:0002240!2.30e-08!3;UBERON:0000988!3.35e-08!3;UBERON:0006331!3.85e-08!3;UBERON:0000349!4.61e-08!5;UBERON:0005383!7.18e-08!3;UBERON:0005382!7.18e-08!3;UBERON:0001896!8.61e-08!3;UBERON:0005290!8.61e-08!3;UBERON:0010096!8.61e-08!3;UBERON:0000477!1.15e-07!286;UBERON:0000475!1.16e-07!365;UBERON:0001872!2.23e-07!5;UBERON:0002021!4.67e-07!5;UBERON:0001871!9.37e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.45e-25;3!UBERON:0005174;1.45e-25;3!UBERON:0001137;1.45e-25;3!UBERON:0000125;7.13e-23;9!UBERON:0002308;7.13e-23;9!UBERON:0003528;6.08e-21;34!UBERON:0002020;6.08e-21;34!UBERON:0001954;7.41e-18;2!UBERON:0003022;7.41e-18;2!UBERON:0002421;7.41e-18;2!UBERON:0002600;7.41e-18;2!UBERON:0002148;9.15e-18;2!UBERON:0005162;9.15e-18;2!UBERON:0000122;9.15e-18;2!UBERON:0006331;9.15e-18;2!UBERON:0009662;9.15e-18;2!UBERON:0001893;4.71e-16;34!UBERON:0004732;8.15e-16;13!UBERON:0000349;1.19e-15;5!UBERON:0002791;3.65e-15;32!UBERON:0001869;3.65e-15;32!UBERON:0001017;6.81e-15;75!UBERON:0001016;5.70e-14;83!UBERON:0000073;3.45e-13;53!UBERON:0002616;3.45e-13;53!UBERON:0002780;3.69e-13;41!UBERON:0001890;3.69e-13;41!UBERON:0002298;4.30e-13;6!UBERON:0000988;3.66e-12;3!UBERON:0004733;2.70e-11;12!UBERON:0002028;2.70e-11;12!UBERON:0009663;3.72e-11;7!UBERON:0002336;6.30e-10;1!UBERON:0011215;6.30e-10;1!UBERON:0001018;6.30e-10;1!UBERON:0002473;6.30e-10;1!UBERON:0005340;6.30e-10;1!UBERON:0003544;6.30e-10;1!UBERON:0005970;6.30e-10;1!UBERON:0002316;6.30e-10;1!UBERON:0001020;6.30e-10;1!UBERON:0002437;6.30e-10;1!UBERON:0001882;1.42e-09;1!UBERON:0000941;1.42e-09;1!UBERON:0001785;1.42e-09;1!UBERON:0002464;1.42e-09;1!UBERON:0004904;1.42e-09;1!UBERON:0001021;1.42e-09;1!UBERON:0005403;1.42e-09;1!UBERON:0000369;3.58e-09;4!UBERON:0002435;3.58e-09;4!UBERON:0000204;3.58e-09;4!UBERON:0000955;4.37e-09;68!UBERON:0002680;6.67e-09;9!UBERON:0001895;6.67e-09;9!UBERON:0002420;8.63e-09;9!UBERON:0007245;8.63e-09;9!UBERON:0010009;8.63e-09;9!UBERON:0010011;8.63e-09;9!UBERON:0000454;8.63e-09;9!UBERON:0000956;6.01e-08;25!UBERON:0000203;6.01e-08;25!UBERON:0007023;3.28e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.50e-41,81;UBERON:0001016,1.52e-40,89;UBERON:0001049,1.10e-34,56;UBERON:0005068,1.10e-34,56;UBERON:0006241,1.10e-34,56;UBERON:0007135,1.10e-34,56;UBERON:0003076,1.38e-26,15;UBERON:0003057,1.38e-26,15;UBERON:0003075,4.24e-26,82;UBERON:0007284,4.24e-26,82;UBERON:0002240,8.07e-26,3;UBERON:0005174,8.07e-26,3;UBERON:0001137,8.07e-26,3;UBERON:0002346,9.14e-25,86;UBERON:0000073,7.28e-24,53;UBERON:0002616,7.28e-24,53;UBERON:0000125,7.84e-23,9;UBERON:0002308,7.84e-23,9;UBERON:0010371,1.36e-22,104;UBERON:0003528,2.85e-22,34;UBERON:0002020,2.85e-22,34;UBERON:0004121,6.56e-22,171;UBERON:0000924,6.56e-22,171;UBERON:0006601,6.56e-22,171;UBERON:0000955,7.20e-21,68;UBERON:0006238,7.20e-21,68;UBERON:0001893,4.85e-18,34;UBERON:0001954,4.85e-18,2;UBERON:0003022,4.85e-18,2;UBERON:0002421,4.85e-18,2;UBERON:0002600,4.85e-18,2;UBERON:0002148,8.08e-18,2;UBERON:0006331,8.08e-18,2;UBERON:0009662,8.08e-18,2;UBERON:0005162,8.80e-18,2;UBERON:0000122,8.80e-18,2;UBERON:0004732,6.35e-16,13;UBERON:0000349,1.29e-15,5;UBERON:0010314,3.53e-15,132;UBERON:0002791,3.78e-15,32;UBERON:0001869,3.78e-15,32;UBERON:0002780,8.07e-15,41;UBERON:0001890,8.07e-15,41;UBERON:0003080,8.07e-15,41;UBERON:0006240,8.07e-15,41;UBERON:0011216,2.21e-14,223;UBERON:0007023,9.79e-14,114;UBERON:0002298,2.96e-13,6;UBERON:0000988,3.37e-12,3;UBERON:0003056,6.78e-12,61;UBERON:0004733,2.20e-11,12;UBERON:0002028,2.20e-11,12;UBERON:0007277,2.20e-11,12;UBERON:0009663,4.22e-11,7;UBERON:0002336,6.31e-10,1;UBERON:0011215,6.31e-10,1;UBERON:0001018,6.31e-10,1;UBERON:0002473,6.31e-10,1;UBERON:0005340,6.31e-10,1;UBERON:0003544,6.31e-10,1;UBERON:0005970,6.31e-10,1;UBERON:0002316,6.31e-10,1;UBERON:0001020,6.31e-10,1;UBERON:0002437,6.31e-10,1;UBERON:0000941,1.36e-09,1;UBERON:0001785,1.36e-09,1;UBERON:0002464,1.36e-09,1;UBERON:0004904,1.36e-09,1;UBERON:0001021,1.36e-09,1;UBERON:0003902,1.36e-09,1;UBERON:0005425,1.36e-09,1;UBERON:0001882,2.46e-09,1;UBERON:0005403,2.46e-09,1;UBERON:0000369,3.58e-09,4;UBERON:0002435,3.58e-09,4;UBERON:0000204,3.58e-09,4;UBERON:0010082,3.58e-09,4;UBERON:0002680,6.68e-09,9;UBERON:0001895,6.68e-09,9;UBERON:0010092,6.68e-09,9;UBERON:0002420,9.49e-09,9;UBERON:0007245,9.49e-09,9;UBERON:0010009,9.49e-09,9;UBERON:0010011,9.49e-09,9;UBERON:0000454,9.49e-09,9;UBERON:0000025,2.92e-08,192;UBERON:0000956,5.29e-08,25;UBERON:0000203,5.29e-08,25 | |||
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| ||
|short_description=p13@TRAF3IP2 | |||
}} | }} |
Latest revision as of 21:02, 19 September 2015
Short description: | p13@TRAF3IP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TRAF3IP2_5end |
Coexpression cluster: | C1942_Neural_spinal_Astrocyte_Neurons_caudate_locus_medial |
Association with transcript: | -2bp_to_NM_001164282, uc003pvd.2_5end |
EntrezGene: | TRAF3IP2 |
HGNC: | 1343 |
UniProt: | O43734 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.81e-26 | 3 |
oligodendrocyte | 1.94e-11 | 7 |
macroglial cell | 1.94e-11 | 7 |
astrocyte | 1.94e-11 | 7 |
oligodendrocyte precursor cell | 1.94e-11 | 7 |
neural cell | 5.76e-11 | 25 |
neuronal stem cell | 2.27e-10 | 8 |