FFCP PHASE1:Hg19::chr5:118812237..118812251,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3295 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5213 | |||
|TSSclassifier=strong | |||
|UniProt=E7ET17 | |||
|association_with_transcript=0bp_to_ENST00000513628_5end | |||
|cluster_id=chr5:118812237..118812251,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_9_at_HSD17B4_5end | |||
|id=chr5:118812237..118812251,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-15;82!UBERON:0006222;3.18e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.58e-97!57;UBERON:0005068!4.58e-97!57;UBERON:0006241!4.58e-97!57;UBERON:0007135!4.58e-97!57;UBERON:0001017!5.19e-80!82;UBERON:0005743!9.51e-80!86;UBERON:0002616!1.42e-78!59;UBERON:0000955!1.02e-77!69;UBERON:0006238!1.02e-77!69;UBERON:0003075!1.15e-72!86;UBERON:0007284!1.15e-72!86;UBERON:0000073!1.60e-71!94;UBERON:0001016!1.60e-71!94;UBERON:0002346!4.38e-69!90;UBERON:0002780!8.00e-67!41;UBERON:0001890!8.00e-67!41;UBERON:0006240!8.00e-67!41;UBERON:0003080!4.09e-65!42;UBERON:0007023!1.08e-64!115;UBERON:0002020!3.00e-63!34;UBERON:0003528!3.00e-63!34;UBERON:0001893!5.16e-63!34;UBERON:0002791!1.34e-59!33;UBERON:0001869!1.25e-55!32;UBERON:0000033!7.90e-48!123;UBERON:0003056!1.91e-46!61;UBERON:0000153!3.11e-45!129;UBERON:0007811!3.11e-45!129;UBERON:0004121!2.06e-40!169;UBERON:0000924!2.76e-39!173;UBERON:0006601!2.76e-39!173;UBERON:0002308!2.02e-37!9;UBERON:0000125!2.02e-37!9;UBERON:0002619!6.40e-37!22;UBERON:0001950!3.46e-35!20;UBERON:0000956!2.98e-32!25;UBERON:0000203!2.98e-32!25;UBERON:0003076!6.03e-32!15;UBERON:0003057!6.03e-32!15;UBERON:0002420!3.05e-29!9;UBERON:0007245!3.05e-29!9;UBERON:0010009!3.05e-29!9;UBERON:0010011!3.05e-29!9;UBERON:0000454!3.05e-29!9;UBERON:0009663!3.50e-29!7;UBERON:0000025!1.90e-27!194;UBERON:0002298!4.53e-26!8;UBERON:0004111!1.13e-21!241;UBERON:0004733!1.53e-21!12;UBERON:0002028!1.53e-21!12;UBERON:0007277!1.53e-21!12;UBERON:0004732!8.81e-20!13;UBERON:0000477!5.44e-18!286;UBERON:0000369!3.50e-17!4;UBERON:0002435!3.50e-17!4;UBERON:0000204!3.50e-17!4;UBERON:0010082!3.50e-17!4;UBERON:0000200!4.05e-17!6;UBERON:0000483!5.49e-16!309;UBERON:0000119!9.56e-16!312;UBERON:0000475!6.41e-15!365;UBERON:0000988!4.60e-14!3;UBERON:0000064!5.36e-14!219;UBERON:0006331!5.71e-14!3;UBERON:0001896!1.18e-13!3;UBERON:0005290!1.18e-13!3;UBERON:0010096!1.18e-13!3;UBERON:0002771!2.05e-13!3;UBERON:0005383!2.42e-13!3;UBERON:0005382!2.42e-13!3;UBERON:0001872!3.14e-13!5;UBERON:0002240!3.83e-13!3;UBERON:0001871!5.95e-13!7;UBERON:0002680!1.38e-11!9;UBERON:0001895!1.38e-11!9;UBERON:0010092!1.38e-11!9;UBERON:0001897!4.37e-10!2;UBERON:0002148!5.68e-10!2;UBERON:0009662!5.68e-10!2;UBERON:0001875!9.14e-10!2;UBERON:0006514!9.14e-10!2;UBERON:0001873!1.53e-09!2;UBERON:0010122!1.53e-09!2;UBERON:0000062!2.59e-09!511;UBERON:0000349!2.75e-08!5;UBERON:0005174!4.61e-08!5;UBERON:0001137!4.61e-08!5;UBERON:0002021!6.96e-08!5;UBERON:0000481!2.58e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.32e-51;9!UBERON:0002308;1.32e-51;9!UBERON:0002298;5.63e-44;6!UBERON:0002420;2.87e-39;9!UBERON:0007245;2.87e-39;9!UBERON:0010009;2.87e-39;9!UBERON:0010011;2.87e-39;9!UBERON:0000454;2.87e-39;9!UBERON:0000073;5.04e-39;53!UBERON:0002616;5.04e-39;53!UBERON:0009663;1.54e-37;7!UBERON:0002780;4.06e-37;41!UBERON:0001890;4.06e-37;41!UBERON:0003528;6.09e-35;34!UBERON:0002020;6.09e-35;34!UBERON:0002791;1.12e-32;32!UBERON:0001893;6.69e-32;34!UBERON:0001869;2.50e-27;32!UBERON:0000955;7.99e-27;68!UBERON:0001017;6.29e-26;75!UBERON:0000988;3.08e-23;3!UBERON:0001896;1.48e-22;3!UBERON:0005290;1.48e-22;3!UBERON:0004733;8.28e-22;12!UBERON:0002028;8.28e-22;12!UBERON:0004732;4.24e-20;13!UBERON:0001016;3.76e-18;83!UBERON:0000369;3.12e-17;4!UBERON:0002435;3.12e-17;4!UBERON:0000204;3.12e-17;4!UBERON:0001897;1.60e-16;2!UBERON:0010225;1.60e-16;2!UBERON:0002148;4.31e-16;2!UBERON:0006331;4.31e-16;2!UBERON:0009662;4.31e-16;2!UBERON:0001875;9.50e-16;2!UBERON:0006514;9.50e-16;2!UBERON:0002619;7.20e-15;22!UBERON:0000349;8.88e-14;5!UBERON:0000956;4.59e-13;25!UBERON:0000203;4.59e-13;25!UBERON:0007023;6.52e-13;114!UBERON:0001950;4.40e-12;20!UBERON:0005383;5.98e-11;3!UBERON:0005382;5.98e-11;3!UBERON:0001870;8.26e-11;3!UBERON:0001894;1.37e-10;7!UBERON:0002336;3.18e-09;1!UBERON:0011215;3.18e-09;1!UBERON:0001018;3.18e-09;1!UBERON:0002473;3.18e-09;1!UBERON:0005340;3.18e-09;1!UBERON:0003544;3.18e-09;1!UBERON:0005970;3.18e-09;1!UBERON:0002316;3.18e-09;1!UBERON:0001020;3.18e-09;1!UBERON:0002437;3.18e-09;1!UBERON:0011216;5.47e-09;132!UBERON:0002038;6.65e-09;1!UBERON:0009661;6.65e-09;1!UBERON:0002950;6.65e-09;1!UBERON:0001891;6.65e-09;1!UBERON:0002784;1.05e-08;4!UBERON:0001882;1.47e-08;1!UBERON:0001874;1.47e-08;1!UBERON:0005403;1.47e-08;1!UBERON:0002680;4.23e-08;9!UBERON:0001895;4.23e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.28e-71,56;UBERON:0005068,4.28e-71,56;UBERON:0006241,4.28e-71,56;UBERON:0007135,4.28e-71,56;UBERON:0000073,9.46e-69,53;UBERON:0002616,9.46e-69,53;UBERON:0000955,3.97e-62,68;UBERON:0006238,3.97e-62,68;UBERON:0001017,5.70e-61,81;UBERON:0001016,1.28e-54,89;UBERON:0000125,1.08e-51,9;UBERON:0002308,1.08e-51,9;UBERON:0002780,8.61e-48,41;UBERON:0001890,8.61e-48,41;UBERON:0003080,8.61e-48,41;UBERON:0006240,8.61e-48,41;UBERON:0003075,1.29e-47,82;UBERON:0007284,1.29e-47,82;UBERON:0002346,3.03e-45,86;UBERON:0002298,2.13e-44,6;UBERON:0003528,2.16e-44,34;UBERON:0002020,2.16e-44,34;UBERON:0002420,3.33e-39,9;UBERON:0007245,3.33e-39,9;UBERON:0010009,3.33e-39,9;UBERON:0010011,3.33e-39,9;UBERON:0000454,3.33e-39,9;UBERON:0001893,1.67e-38,34;UBERON:0009663,1.87e-37,7;UBERON:0010371,8.19e-37,104;UBERON:0007023,1.30e-36,114;UBERON:0002791,4.81e-35,32;UBERON:0003056,2.27e-31,61;UBERON:0001869,9.82e-30,32;UBERON:0010314,3.20e-28,132;UBERON:0004121,5.75e-27,171;UBERON:0000924,5.75e-27,171;UBERON:0006601,5.75e-27,171;UBERON:0003076,8.70e-24,15;UBERON:0003057,8.70e-24,15;UBERON:0000988,1.82e-23,3;UBERON:0001896,9.51e-23,3;UBERON:0005290,9.51e-23,3;UBERON:0010096,9.51e-23,3;UBERON:0004733,5.14e-22,12;UBERON:0002028,5.14e-22,12;UBERON:0007277,5.14e-22,12;UBERON:0004732,2.74e-20,13;UBERON:0011216,1.08e-19,223;UBERON:0000025,3.55e-18,192;UBERON:0000369,4.01e-17,4;UBERON:0002435,4.01e-17,4;UBERON:0000204,4.01e-17,4;UBERON:0010082,4.01e-17,4;UBERON:0001897,1.73e-16,2;UBERON:0010225,1.73e-16,2;UBERON:0002148,2.73e-16,2;UBERON:0006331,2.73e-16,2;UBERON:0009662,2.73e-16,2;UBERON:0001875,6.29e-16,2;UBERON:0006514,6.29e-16,2;UBERON:0002619,9.14e-15,22;UBERON:0000349,9.29e-14,5;UBERON:0004111,1.01e-13,240;UBERON:0000956,5.66e-13,25;UBERON:0000203,5.66e-13,25;UBERON:0001950,5.49e-12,20;UBERON:0005383,6.95e-11,3;UBERON:0005382,6.95e-11,3;UBERON:0001870,9.82e-11,3;UBERON:0001894,1.39e-10,7;UBERON:0006222,1.39e-10,7;UBERON:0000483,7.42e-10,306;UBERON:0000119,1.02e-09,309;UBERON:0002336,3.31e-09,1;UBERON:0011215,3.31e-09,1;UBERON:0001018,3.31e-09,1;UBERON:0002473,3.31e-09,1;UBERON:0005340,3.31e-09,1;UBERON:0003544,3.31e-09,1;UBERON:0005970,3.31e-09,1;UBERON:0002316,3.31e-09,1;UBERON:0001020,3.31e-09,1;UBERON:0002437,3.31e-09,1;UBERON:0002038,9.02e-09,1;UBERON:0009661,9.02e-09,1;UBERON:0002950,9.02e-09,1;UBERON:0001891,9.02e-09,1;UBERON:0009616,9.02e-09,1;UBERON:0010286,9.02e-09,1;UBERON:0002784,1.09e-08,4;UBERON:0001882,1.65e-08,1;UBERON:0005403,1.65e-08,1;UBERON:0001874,2.06e-08,1;UBERON:0002680,3.57e-08,9;UBERON:0001895,3.57e-08,9;UBERON:0010092,3.57e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0,3.54296554325536,0.482385754501632,0,0.442317039724898,0.295547618953547,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1114691118213,0,4.2167600230561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.60120219894787,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31545790389679,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58565912723101,2.6446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,2.1282458220105,2.29363678276028,1.99672292766334,1.55241007353459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,0,0.957803154342908,1.23069818544453,0,0.414943514785307,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0.781078098613847,1.2401207790071,0.824405532520789,0,0,0,0,0,0,0,0,0,0,0,0,2.44691038716594,0.328863867814245,0,0,0,1.09980912941201,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14093547383912,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,2.00675416412032,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,3.10298987585686,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@HSD17B4 | |||
}} |
Latest revision as of 22:06, 19 September 2015
Short description: | p9@HSD17B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HSD17B4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000513628_5end |
EntrezGene: | HSD17B4 |
HGNC: | 5213 |
UniProt: | E7ET17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data