FFCP PHASE1:Hg19::chr3:12045853..12045869,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11495 | |||
|TSSclassifier=strong | |||
|UniProt=F5H7H8,Q86VA8 | |||
|association_with_transcript=0bp_to_ENST00000540660,NM_003178,NM_133625,uc003bwl.1,uc003bwm.2_5end | |||
|cluster_id=chr3:12045853..12045869,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYN2_5end | |||
|id=chr3:12045853..12045869,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.02e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.91e-16;82!UBERON:0009117;2.46e-07;10!UBERON:0005564;2.46e-07;10!UBERON:0002532;4.77e-07;206!UBERON:0010316;4.77e-07;206!UBERON:0006215;8.77e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.39e-44;32!UBERON:0002619;6.46e-43;22!UBERON:0003528;2.47e-42;34!UBERON:0002020;2.47e-42;34!UBERON:0001893;2.62e-42;34!UBERON:0002791;2.62e-41;32!UBERON:0002780;7.73e-41;41!UBERON:0001890;7.73e-41;41!UBERON:0001950;3.32e-39;20!UBERON:0000073;8.60e-38;53!UBERON:0002616;8.60e-38;53!UBERON:0000956;4.81e-37;25!UBERON:0000203;4.81e-37;25!UBERON:0001017;8.09e-28;75!UBERON:0000955;1.35e-26;68!UBERON:0001016;3.09e-25;83!UBERON:0001871;4.95e-14;6!UBERON:0000922;8.47e-14;49!UBERON:0002420;9.95e-14;9!UBERON:0007245;9.95e-14;9!UBERON:0010009;9.95e-14;9!UBERON:0010011;9.95e-14;9!UBERON:0000454;9.95e-14;9!UBERON:0000125;3.12e-13;9!UBERON:0002308;3.12e-13;9!UBERON:0004732;3.38e-13;13!UBERON:0007023;5.19e-13;114!UBERON:0000200;8.17e-13;6!UBERON:0004733;6.32e-12;12!UBERON:0002028;6.32e-12;12!UBERON:0002298;1.67e-11;6!UBERON:0000349;5.05e-11;5!UBERON:0011216;6.69e-11;132!UBERON:0001872;1.75e-10;5!UBERON:0002021;2.29e-10;5!UBERON:0009663;5.51e-10;7!UBERON:0001894;9.98e-09;7!UBERON:0000369;1.06e-08;4!UBERON:0002435;1.06e-08;4!UBERON:0000204;1.06e-08;4!UBERON:0002680;1.33e-07;9!UBERON:0001895;1.33e-07;9!UBERON:0001870;3.04e-07;3!UBERON:0000473;3.75e-07;8!UBERON:0005383;7.44e-07;3!UBERON:0005382;7.44e-07;3!UBERON:0000988;9.29e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,15.6519995219767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,1.1409436430889,0,0.117434498643765,0.323745888736263,0.280901613404497,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,2.31750041646231,1.72288698817931,0.929551542956147,1.55491582523056,2.01856680700503,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0.508189248444927,2.60279707715243,0.773288812777695,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.847294206991012,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,3.84991942105343,0.245040215981032,0,0,0,0.478278818186467,0.399158742865633,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.73254089635947,0.36408156524854,0,0.284136146806413,0,0,0,154.092885403776,132.932598507935,0,0,0.63337622438398,0.796991953004279,0,0,0,0.123084805461069,0,0,0,0,0.394573622547734,0,0,120.197260515807,88.4079975482443,27.9459317201672,0,0,0.724999575434793,0,0,0,13.4449915564171,2.33283690706603,2.08349993919951,22.143534645346,71.5136881048669,50.3519729846375,58.607007763549,57.6317856959418,68.4482439120394,0,0,1.38510465306835,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,2.4441205797345,2.96521128680622,2.96553453471607,2.92381458615275,6.67271216508703,0,20.8495356695552,0,0,0.485560759068186,0,2.41981432097328,10.1004011338062,3.28570214068137,1.9542044523884,1.03688191397247,1.99396161812156,0,1.2557316736289,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,0.290967049465258,0,2.93774963014692,0,0,111.300379290435,0.391102765469606,0,0.426905989478705,0.19980960958213,0.432271251462318,0,0,0,0,0,0,0,0,0,26.4184927032307,5.47621515567972,0,0,0.262887354279314,1.11712960508902,0.458320848023367,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,116.898764401968,63.0621770296595,3.3758161177654,4.26372253451425,5.40072439437941,0,0,144.097948392834,0,0.945668487590378,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,32.4500220467492,20.2315880666316,0,0,0.320362237703084,0.471612915298998,2.07119527673598,0,0,0,0,0,0,0,0,2.35581144375351,139.112704254817,151.556621008238,70.8580667798789,12.6150023051816,15.6409962666962,19.436174120653,103.069733027492,0,0,0,0,88.0469622916937,115.93682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,74.1065217773277,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,14.0683808434017,63.5088139126456,0,12.1222698393135,0,0,0,0,0,0,0,0,0,89.4713105593681,51.0107674772106,40.5470002005164,81.0209638750982,30.5006752428279,97.9266694893325,157.92318142795,2.85538840518309,0,0,0,0,0,0,5.17182177502314,0.526472298444801,0,0,0,0,0,104.953406496985,89.8239813405925,66.3464616768801,109.011777723326,7.11067251723685,0.548257766857182,0,0,0,1.60710550763486,0,4.24875922965642,2.27662191351298,1.86274977341542,0,0,86.3215608805763,99.8430702684049,0.236387681767936,0,0.627944742804112,81.228759986573,0,4.56579360254748,0,0,4.43154573895269,0.158013611732727,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,1.86123831398592,0,0,0,0.121917924982269,0.647428837187895,0,1.1598144313382,0,28.0727356154527,0,1.07028081699812,0.79062257427272,5.16720428703517,0,2.00652811080656,2.18559560503957,0.470317296361523,0.245148321753905,0,15.9009858363106,2.37637120261669,15.2156061930024,0,0.375935671919414,0.0644578879735772,0,0,0,0,2.19100916473955,0.458729283404541,0.716697915757256,0,161.479789203422,14.8359234715728,1.5870805215462,0,0,0,1.89249637252618,2.29457701123761,0.126698501011437,3.56960904096936,1.3360870263278,2.29737248837112,4.011320628678,2.424918342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| |||
|short_description=p1@SYN2 | |||
}} |
Latest revision as of 22:22, 19 September 2015
Short description: | p1@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000540660, NM_003178, NM_133625, uc003bwl.1, uc003bwm.2_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | F5H7H8Q86VA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data