FFCP PHASE1:Hg19::chr18:74691669..74691680,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:74691669..74691680,-
|short_description=p22@MBP
|description=CAGE_peak_22_at_MBP_5end
|association_with_transcript=271bp_to_BC130034_5end
|EntrezGene=415...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=271bp_to_BC130034_5end | |||
|cluster_id=chr18:74691669..74691680,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_22_at_MBP_5end | |||
|id=chr18:74691669..74691680,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.53e-20;82!UBERON:0006241;3.92e-15;3!UBERON:0003057;3.92e-15;3!UBERON:0002532;1.33e-07;206!UBERON:0010316;1.33e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.50e-94!57;UBERON:0005068!5.50e-94!57;UBERON:0006241!5.50e-94!57;UBERON:0007135!5.50e-94!57;UBERON:0002616!1.47e-76!59;UBERON:0001017!6.43e-72!82;UBERON:0005743!2.72e-71!86;UBERON:0000955!1.03e-70!69;UBERON:0006238!1.03e-70!69;UBERON:0002780!1.72e-69!41;UBERON:0001890!1.72e-69!41;UBERON:0006240!1.72e-69!41;UBERON:0002020!1.95e-68!34;UBERON:0003528!1.95e-68!34;UBERON:0001893!4.00e-68!34;UBERON:0003080!1.12e-67!42;UBERON:0000073!5.59e-67!94;UBERON:0001016!5.59e-67!94;UBERON:0002791!3.12e-65!33;UBERON:0003075!3.15e-65!86;UBERON:0007284!3.15e-65!86;UBERON:0002346!7.02e-62!90;UBERON:0001869!1.12e-61!32;UBERON:0007023!7.61e-60!115;UBERON:0002619!1.53e-47!22;UBERON:0003056!2.42e-47!61;UBERON:0000033!6.88e-42!123;UBERON:0001950!9.52e-42!20;UBERON:0000956!1.81e-41!25;UBERON:0000203!1.81e-41!25;UBERON:0000153!1.80e-39!129;UBERON:0007811!1.80e-39!129;UBERON:0004121!3.50e-36!169;UBERON:0000924!4.27e-35!173;UBERON:0006601!4.27e-35!173;UBERON:0002308!9.69e-30!9;UBERON:0000125!9.69e-30!9;UBERON:0002420!6.26e-29!9;UBERON:0007245!6.26e-29!9;UBERON:0010009!6.26e-29!9;UBERON:0010011!6.26e-29!9;UBERON:0000454!6.26e-29!9;UBERON:0003076!5.41e-26!15;UBERON:0003057!5.41e-26!15;UBERON:0009663!3.50e-23!7;UBERON:0000025!8.90e-22!194;UBERON:0002298!5.00e-21!8;UBERON:0004732!4.44e-20!13;UBERON:0000200!1.31e-19!6;UBERON:0004733!4.05e-17!12;UBERON:0002028!4.05e-17!12;UBERON:0007277!4.05e-17!12;UBERON:0004111!1.67e-16!241;UBERON:0000349!3.48e-16!5;UBERON:0001871!1.40e-14!7;UBERON:0000369!2.69e-13!4;UBERON:0002435!2.69e-13!4;UBERON:0000204!2.69e-13!4;UBERON:0010082!2.69e-13!4;UBERON:0000477!3.64e-13!286;UBERON:0000064!1.55e-12!219;UBERON:0000483!3.98e-12!309;UBERON:0000119!6.59e-12!312;UBERON:0002240!1.08e-11!3;UBERON:0006331!1.16e-11!3;UBERON:0000475!1.64e-11!365;UBERON:0002021!2.35e-11!5;UBERON:0000988!2.56e-11!3;UBERON:0001896!3.04e-11!3;UBERON:0005290!3.04e-11!3;UBERON:0010096!3.04e-11!3;UBERON:0002771!5.06e-11!3;UBERON:0001872!6.23e-11!5;UBERON:0005383!1.79e-10!3;UBERON:0005382!1.79e-10!3;UBERON:0002680!3.11e-09!9;UBERON:0001895!3.11e-09!9;UBERON:0010092!3.11e-09!9;UBERON:0005162!2.07e-08!2;UBERON:0000122!2.07e-08!2;UBERON:0002148!2.84e-08!2;UBERON:0009662!2.84e-08!2;UBERON:0001875!2.94e-08!2;UBERON:0006514!2.94e-08!2;UBERON:0001897!3.50e-08!2;UBERON:0001954!1.36e-07!2;UBERON:0003022!1.36e-07!2;UBERON:0002421!1.36e-07!2;UBERON:0002600!1.36e-07!2;UBERON:0001873!1.61e-07!2;UBERON:0010122!1.61e-07!2;UBERON:0001876!1.90e-07!2;UBERON:0001870!2.63e-07!2;UBERON:0005174!3.78e-07!5;UBERON:0001137!3.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.84e-63;34!UBERON:0003528;1.78e-60;34!UBERON:0002020;1.78e-60;34!UBERON:0002791;5.21e-58;32!UBERON:0001869;1.17e-57;32!UBERON:0002780;2.19e-53;41!UBERON:0001890;2.19e-53;41!UBERON:0002619;2.60e-51;22!UBERON:0000073;4.14e-51;53!UBERON:0002616;4.14e-51;53!UBERON:0000956;6.19e-45;25!UBERON:0000203;6.19e-45;25!UBERON:0001950;7.15e-44;20!UBERON:0001017;1.15e-34;75!UBERON:0000955;1.05e-32;68!UBERON:0000125;9.86e-32;9!UBERON:0002308;9.86e-32;9!UBERON:0002298;1.51e-27;6!UBERON:0001016;1.59e-27;83!UBERON:0002420;6.38e-24;9!UBERON:0007245;6.38e-24;9!UBERON:0010009;6.38e-24;9!UBERON:0010011;6.38e-24;9!UBERON:0000454;6.38e-24;9!UBERON:0009663;4.75e-23;7!UBERON:0004732;1.06e-21;13!UBERON:0000200;2.04e-18;6!UBERON:0007023;3.10e-18;114!UBERON:0004733;5.75e-18;12!UBERON:0002028;5.75e-18;12!UBERON:0002240;3.92e-15;3!UBERON:0005174;3.92e-15;3!UBERON:0001137;3.92e-15;3!UBERON:0002021;7.91e-15;5!UBERON:0000988;9.71e-15;3!UBERON:0001896;1.40e-14;3!UBERON:0005290;1.40e-14;3!UBERON:0001872;3.10e-14;5!UBERON:0000349;5.06e-14;5!UBERON:0011216;2.48e-12;132!UBERON:0005162;9.54e-11;2!UBERON:0000122;9.54e-11;2!UBERON:0002148;1.27e-10;2!UBERON:0006331;1.27e-10;2!UBERON:0009662;1.27e-10;2!UBERON:0001875;1.49e-10;2!UBERON:0006514;1.49e-10;2!UBERON:0001871;1.84e-10;6!UBERON:0001897;1.84e-10;2!UBERON:0010225;1.84e-10;2!UBERON:0000369;2.27e-10;4!UBERON:0002435;2.27e-10;4!UBERON:0000204;2.27e-10;4!UBERON:0002771;3.00e-10;2!UBERON:0001954;1.22e-09;2!UBERON:0003022;1.22e-09;2!UBERON:0002421;1.22e-09;2!UBERON:0002600;1.22e-09;2!UBERON:0010314;7.06e-09;132!UBERON:0002680;2.43e-08;9!UBERON:0001895;2.43e-08;9!UBERON:0005383;7.72e-07;3!UBERON:0005382;7.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.79e-107,56;UBERON:0005068,6.79e-107,56;UBERON:0006241,6.79e-107,56;UBERON:0007135,6.79e-107,56;UBERON:0000073,1.38e-94,53;UBERON:0002616,1.38e-94,53;UBERON:0001017,1.03e-83,81;UBERON:0000955,1.55e-80,68;UBERON:0006238,1.55e-80,68;UBERON:0001016,5.47e-79,89;UBERON:0002780,4.64e-77,41;UBERON:0001890,4.64e-77,41;UBERON:0003080,4.64e-77,41;UBERON:0006240,4.64e-77,41;UBERON:0003075,2.67e-75,82;UBERON:0007284,2.67e-75,82;UBERON:0003528,6.40e-74,34;UBERON:0002020,6.40e-74,34;UBERON:0001893,1.52e-73,34;UBERON:0002346,1.79e-71,86;UBERON:0002791,9.12e-66,32;UBERON:0001869,2.55e-65,32;UBERON:0007023,6.08e-59,114;UBERON:0010371,7.37e-58,104;UBERON:0003056,2.87e-54,61;UBERON:0002619,2.32e-51,22;UBERON:0010314,1.21e-46,132;UBERON:0000956,5.60e-45,25;UBERON:0000203,5.60e-45,25;UBERON:0001950,6.72e-44,20;UBERON:0004121,6.43e-38,171;UBERON:0000924,6.43e-38,171;UBERON:0006601,6.43e-38,171;UBERON:0000125,1.09e-31,9;UBERON:0002308,1.09e-31,9;UBERON:0003076,3.13e-29,15;UBERON:0003057,3.13e-29,15;UBERON:0011216,8.19e-29,223;UBERON:0002298,1.82e-27,6;UBERON:0000025,5.46e-26,192;UBERON:0002420,6.60e-24,9;UBERON:0007245,6.60e-24,9;UBERON:0010009,6.60e-24,9;UBERON:0010011,6.60e-24,9;UBERON:0000454,6.60e-24,9;UBERON:0009663,4.84e-23,7;UBERON:0004732,1.19e-21,13;UBERON:0004111,3.28e-19,240;UBERON:0000200,2.04e-18,6;UBERON:0004733,6.38e-18,12;UBERON:0002028,6.38e-18,12;UBERON:0007277,6.38e-18,12;UBERON:0002240,3.57e-15,3;UBERON:0005174,3.57e-15,3;UBERON:0001137,3.57e-15,3;UBERON:0002021,7.50e-15,5;UBERON:0000988,1.14e-14,3;UBERON:0001896,1.44e-14,3;UBERON:0005290,1.44e-14,3;UBERON:0010096,1.44e-14,3;UBERON:0000483,1.90e-14,306;UBERON:0001872,2.79e-14,5;UBERON:0000119,3.15e-14,309;UBERON:0000349,4.89e-14,5;UBERON:0005162,9.11e-11,2;UBERON:0000122,9.11e-11,2;UBERON:0002148,1.39e-10,2;UBERON:0006331,1.39e-10,2;UBERON:0009662,1.39e-10,2;UBERON:0001875,1.46e-10,2;UBERON:0006514,1.46e-10,2;UBERON:0001897,1.84e-10,2;UBERON:0010225,1.84e-10,2;UBERON:0001871,1.88e-10,6;UBERON:0000369,2.30e-10,4;UBERON:0002435,2.30e-10,4;UBERON:0000204,2.30e-10,4;UBERON:0010082,2.30e-10,4;UBERON:0002771,2.93e-10,2;UBERON:0001954,1.14e-09,2;UBERON:0003022,1.14e-09,2;UBERON:0002421,1.14e-09,2;UBERON:0002600,1.14e-09,2;UBERON:0002680,2.60e-08,9;UBERON:0001895,2.60e-08,9;UBERON:0010092,2.60e-08,9;UBERON:0005383,7.83e-07,3;UBERON:0005382,7.83e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,3.09472716103128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6626602070474,5.75162208603478,0,0,0,0,0,0,0,0,0,0,5.31444831488303,0.844175070377856,0,0.442317039724898,2.65992857058193,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,9.9753676811402,0,8.43352004611221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,1.89932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80546375322726,14.7857809203352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,4.35850899557042,0,0,0,0,0,1.03274246318642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30837285803164,10.0496777324444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,10.4942587815688,3.004582336956,4.58727356552057,10.3164017929273,6.3959295029625,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,5.6678630530234,8.14132681191471,8.61488729811171,0,2.76629009856872,5.81312324274664,25.6984956466478,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,3.90539049306924,4.75379631952723,2.40980078736846,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,4.01021424563307,2.89400203676536,0,0,0,2.67096502857203,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3791652511038,10.9907168121022,8.453114551668,0,0,0,0,0,0,0,0,0,14.0472791488422,0,2.58367662725476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12086383404657,8.5849386565373,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,3.09472716103128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6626602070474,5.75162208603478,0,0,0,0,0,0,0,0,0,0,5.31444831488303,0.844175070377856,0,0.442317039724898,2.65992857058193,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,9.9753676811402,0,8.43352004611221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,1.89932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80546375322726,14.7857809203352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,4.35850899557042,0,0,0,0,0,1.03274246318642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30837285803164,10.0496777324444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,10.4942587815688,3.004582336956,4.58727356552057,10.3164017929273,6.3959295029625,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,5.6678630530234,8.14132681191471,8.61488729811171,0,2.76629009856872,5.81312324274664,25.6984956466478,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,3.90539049306924,4.75379631952723,2.40980078736846,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,4.01021424563307,2.89400203676536,0,0,0,2.67096502857203,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3791652511038,10.9907168121022,8.453114551668,0,0,0,0,0,0,0,0,0,14.0472791488422,0,2.58367662725476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12086383404657,8.5849386565373,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p22@MBP | |||
}} | }} |
Latest revision as of 16:44, 24 September 2015
Short description: | p22@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_MBP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 271bp_to_BC130034_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data