FFCP PHASE1:Hg19::chr7:108096799..108096810,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |||
|TSSclassifier=strong | |||
|UniProt=F8W775,Q92823,F8W774,C9JYY6,F5GYD3 | |||
|association_with_transcript=15bp_to_ENST00000379022,ENST00000379028,ENST00000379032,ENST00000413765,ENST00000537765,uc003vfb.2,uc003vfc.2,uc003vfd.2,uc003vfe.2,uc011kmk.1_5end | |||
|cluster_id=chr7:108096799..108096810,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_NRCAM_5end | |||
|id=chr7:108096799..108096810,- | |||
|ontology_enrichment_celltype=CL:0002139!1.39e-07!24;CL:0000071!1.79e-07!18;CL:0002546!1.79e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.08e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.64e-41!57;UBERON:0005068!4.64e-41!57;UBERON:0006241!4.64e-41!57;UBERON:0007135!4.64e-41!57;UBERON:0001017!2.09e-38!82;UBERON:0000073!6.81e-37!94;UBERON:0001016!6.81e-37!94;UBERON:0005743!2.92e-36!86;UBERON:0002616!1.97e-34!59;UBERON:0003075!2.28e-34!86;UBERON:0007284!2.28e-34!86;UBERON:0000955!3.66e-33!69;UBERON:0006238!3.66e-33!69;UBERON:0002346!6.00e-33!90;UBERON:0002780!3.52e-32!41;UBERON:0001890!3.52e-32!41;UBERON:0006240!3.52e-32!41;UBERON:0003080!6.47e-31!42;UBERON:0000025!7.16e-30!194;UBERON:0001893!2.61e-27!34;UBERON:0002020!3.11e-27!34;UBERON:0003528!3.11e-27!34;UBERON:0002791!2.12e-26!33;UBERON:0001869!6.30e-26!32;UBERON:0003056!3.82e-25!61;UBERON:0000483!5.01e-24!309;UBERON:0004111!7.15e-24!241;UBERON:0000033!1.57e-23!123;UBERON:0000119!3.10e-23!312;UBERON:0000153!8.29e-23!129;UBERON:0007811!8.29e-23!129;UBERON:0004121!4.17e-22!169;UBERON:0000924!1.15e-21!173;UBERON:0006601!1.15e-21!173;UBERON:0000477!3.09e-21!286;UBERON:0000956!1.65e-20!25;UBERON:0000203!1.65e-20!25;UBERON:0007023!5.91e-20!115;UBERON:0000475!8.61e-20!365;UBERON:0002619!3.75e-18!22;UBERON:0001950!1.60e-16!20;UBERON:0000468!7.67e-15!659;UBERON:0000922!2.47e-13!612;UBERON:0000481!3.81e-13!347;UBERON:0000467!5.10e-13!625;UBERON:0000480!7.20e-13!626;UBERON:0002050!8.50e-13!605;UBERON:0005423!8.50e-13!605;UBERON:0000923!1.91e-12!604;UBERON:0005291!1.91e-12!604;UBERON:0006598!1.91e-12!604;UBERON:0002532!1.91e-12!604;UBERON:0003076!4.83e-11!15;UBERON:0003057!4.83e-11!15;UBERON:0000064!1.37e-10!219;UBERON:0004732!3.01e-09!13;UBERON:0004733!8.60e-09!12;UBERON:0002028!8.60e-09!12;UBERON:0007277!8.60e-09!12;UBERON:0002420!3.15e-08!9;UBERON:0007245!3.15e-08!9;UBERON:0010009!3.15e-08!9;UBERON:0010011!3.15e-08!9;UBERON:0000454!3.15e-08!9;UBERON:0002308!3.84e-08!9;UBERON:0000125!3.84e-08!9;UBERON:0004872!6.24e-08!84;UBERON:0001986!1.79e-07!18;UBERON:0004638!1.79e-07!18;UBERON:0004852!1.79e-07!18;UBERON:0001637!5.96e-07!42;UBERON:0003509!5.96e-07!42;UBERON:0004572!5.96e-07!42;UBERON:0001981!6.65e-07!60;UBERON:0007500!6.65e-07!60;UBERON:0004537!6.65e-07!60;UBERON:0006965!6.65e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.36e-40;34!UBERON:0003528;9.65e-40;34!UBERON:0002020;9.65e-40;34!UBERON:0001869;1.29e-39;32!UBERON:0002791;3.34e-39;32!UBERON:0002780;9.83e-39;41!UBERON:0001890;9.83e-39;41!UBERON:0000073;2.88e-37;53!UBERON:0002616;2.88e-37;53!UBERON:0000956;1.63e-34;25!UBERON:0000203;1.63e-34;25!UBERON:0002619;1.80e-30;22!UBERON:0001950;1.14e-27;20!UBERON:0000955;1.34e-25;68!UBERON:0001017;9.64e-25;75!UBERON:0001016;3.06e-22;83!UBERON:0002420;4.43e-13;9!UBERON:0007245;4.43e-13;9!UBERON:0010009;4.43e-13;9!UBERON:0010011;4.43e-13;9!UBERON:0000454;4.43e-13;9!UBERON:0000125;6.29e-13;9!UBERON:0002308;6.29e-13;9!UBERON:0004732;6.08e-12;13!UBERON:0004733;3.84e-11;12!UBERON:0002028;3.84e-11;12!UBERON:0000200;2.11e-10;6!UBERON:0009663;2.95e-10;7!UBERON:0007023;1.51e-09;114!UBERON:0002298;1.62e-09;6!UBERON:0001894;1.75e-09;7!UBERON:0000349;1.05e-08;5!UBERON:0001872;1.30e-08;5!UBERON:0002021;2.77e-08;5!UBERON:0001871;3.06e-08;6!UBERON:0011216;1.27e-07;132!UBERON:0002680;1.37e-07;9!UBERON:0001895;1.37e-07;9!UBERON:0000369;4.72e-07;4!UBERON:0002435;4.72e-07;4!UBERON:0000204;4.72e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.00e-68,56;UBERON:0005068,1.00e-68,56;UBERON:0006241,1.00e-68,56;UBERON:0007135,1.00e-68,56;UBERON:0000073,1.59e-64,53;UBERON:0002616,1.59e-64,53;UBERON:0001017,2.00e-63,81;UBERON:0001016,3.68e-62,89;UBERON:0000955,3.06e-56,68;UBERON:0006238,3.06e-56,68;UBERON:0002780,1.10e-54,41;UBERON:0001890,1.10e-54,41;UBERON:0003080,1.10e-54,41;UBERON:0006240,1.10e-54,41;UBERON:0003075,5.50e-50,82;UBERON:0007284,5.50e-50,82;UBERON:0002346,1.05e-46,86;UBERON:0001893,2.69e-46,34;UBERON:0003528,3.65e-46,34;UBERON:0002020,3.65e-46,34;UBERON:0001869,6.46e-44,32;UBERON:0002791,2.30e-43,32;UBERON:0010371,7.56e-41,104;UBERON:0003056,3.32e-39,61;UBERON:0000025,9.86e-35,192;UBERON:0000956,1.37e-34,25;UBERON:0000203,1.37e-34,25;UBERON:0004121,1.23e-30,171;UBERON:0000924,1.23e-30,171;UBERON:0006601,1.23e-30,171;UBERON:0002619,1.55e-30,22;UBERON:0010314,3.31e-30,132;UBERON:0004111,5.13e-29,240;UBERON:0001950,9.94e-28,20;UBERON:0007023,1.49e-26,114;UBERON:0011216,9.62e-26,223;UBERON:0000483,1.35e-21,306;UBERON:0000119,4.19e-21,309;UBERON:0003076,8.84e-15,15;UBERON:0003057,8.84e-15,15;UBERON:0002420,5.75e-13,9;UBERON:0007245,5.75e-13,9;UBERON:0010009,5.75e-13,9;UBERON:0010011,5.75e-13,9;UBERON:0000454,5.75e-13,9;UBERON:0000125,8.07e-13,9;UBERON:0002308,8.07e-13,9;UBERON:0002050,3.89e-12,564;UBERON:0000923,5.81e-12,560;UBERON:0010316,5.81e-12,560;UBERON:0005291,5.81e-12,560;UBERON:0006598,5.81e-12,560;UBERON:0010317,5.81e-12,560;UBERON:0002532,5.81e-12,560;UBERON:0004732,7.78e-12,13;UBERON:0004733,4.83e-11,12;UBERON:0002028,4.83e-11,12;UBERON:0007277,4.83e-11,12;UBERON:0005423,9.10e-11,581;UBERON:0000922,2.00e-10,592;UBERON:0000200,2.16e-10,6;UBERON:0009663,3.90e-10,7;UBERON:0001894,1.35e-09,7;UBERON:0006222,1.35e-09,7;UBERON:0002298,1.54e-09,6;UBERON:0000349,1.00e-08,5;UBERON:0001872,1.22e-08,5;UBERON:0001871,2.65e-08,6;UBERON:0002021,2.98e-08,5;UBERON:0002680,1.78e-07,9;UBERON:0001895,1.78e-07,9;UBERON:0010092,1.78e-07,9;UBERON:0000369,5.18e-07,4;UBERON:0002435,5.18e-07,4;UBERON:0000204,5.18e-07,4;UBERON:0010082,5.18e-07,4 | |||
|phase1_expression=1.63510541343501,1.2846031433459,2.39622486963151,2.00146596706261,0.446961094427288,0,0,3.15859936713415,1.56711376919903,0,0,0,0,0,0.331397375727916,0.672325146451775,2.41077811209591,1.46062018077475,0.487932798790507,0.61560529038394,0.204000691244253,1.25381888591235,6.5834277040143,6.43309797842556,7.53255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.511450247374121,0,0,0,0,0,1.89069634328136,0.443458794925128,0.87834785693126,1.57174890597255,0.364295288292542,0.741568885568859,0,0,0,0,0,0,1.78886166630035,0.860234595106124,0.694281003215189,2.26123176769604,2.51699661725944,1.37559020970034,1.04497483268405,0.775250277507987,0,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,1.10298924103761,0.81014194788176,0.625098097988558,1.34717623575702,1.80178368773316,1.53316637465883,0,1.83201743930407,0,0,0,0,0,0.132409180813219,1.14734648299525,0,0,0,0,1.24484414159907,3.3677668017422,1.47115712802113,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,1.03325781175765,0,0,0,0,0.505008341862199,0.625592599359821,0,0,0,0,0.907457465280168,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0.643240938192885,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0.171567810298526,0,0,0,0.648119116109707,0,0,0,6.02838105870399,0.117408694235822,1.44366447761074,0.462985512576611,0,3.95102198979638,0.858486162094873,0,0,0,0,0.16798212819886,0.567100388969546,0.53735113621709,0,0,0.492663237895943,0.176096868026452,0.414656231081544,2.16179930125442,1.51490920111656,0,0,0,1.71072446022705,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0.205476322550383,0.537182889719687,0,0,0,0,11.6883527142333,5.20559415430487,1.54657762555539,2.68026024534958,1.91381625495949,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.561320188866147,0.896974044789907,0,0.160853921143607,0,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0.462092022626489,0,0,0.844413031143006,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0.767518373630648,0.275673144969061,0.214840489736547,0.725083469571143,0.511359764496605,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,1.23213432070436,0.532306030317022,0,3.15051172476664,1.00187420719394,0.744316738719335,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,1.46228093778771,1.05650146756755,0,0,4.52032466480971,0,1.99031692572366,1.31535265576129,0.578775534266688,0,0,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,10.9356241254293,10.690875647199,1.66963057534359,1.31843099381408,0,0,0,4.28285671352269,1.43176155503017,0,0.933118762985422,0,0,0,0,0,0,8.72399471485697,11.224939877584,3.99227596002388,2.3438498497671,0,0,0.1137934482855,0,0,0,0.291604613383254,2.43074992906609,6.20018970069687,7.35638275614988,3.05163472634166,6.3030178160798,4.13766666534966,12.0661968434685,0,0,0,1.02547850262301,0,0.269272933229316,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,1.89898258075224,1.14262965711403,0.565412285735763,0,0,0,0.611030144933625,0,0,0,6.470508766145,0,4.91955336023212,0,0,0,3.55125962564451,0,2.75465485467441,0.695052375913368,0,0.414752765588989,0,0,0.313932918407225,0,1.99226682220855,0,0.173559738335131,0,0,2.09672001890436,0,0,0,0,0.193978032976839,0.0882561266915003,2.03382666702479,0,0,14.118307498161,0.391102765469606,2.48492342779755,0.213452994739353,0,0,0.114536596165916,0.514784993585894,0,0,0,0,0,0,0,2.40168115483916,3.42263447229983,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0.202210631562555,3.54338933453096,0,10.3379859675209,7.76359414835981,0.160753148465019,0,0,0.2249738915515,0.77380195455795,15.7948847310864,0,0.709251365692784,0.83927341015997,0,2.68931008999267,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,6.85199668716218,8.19842130804678,2.39521573038061,1.40963004463334,0.427149650270779,3.61569901729232,0.414239055347196,0,0,0,0,1.63205341010842,0.7520696820681,0.919036730290385,1.31149052283922,2.98402782875445,14.1770908794718,11.2264163709806,9.38931980298749,3.44045517414043,4.99180731915835,8.50720720296953,0,0.249960815924213,0.303298235083296,1.7127920012698,0,0,1.30428925749743,0,0,0,0,0,0,0.915360273587694,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0,0,0.813741466409323,0,0.322231671127465,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38107189034688,0,0,10.2311242752281,0.389720617678777,0.398594520940089,0.654261577023377,0,1.72041036127604,0.211312123358627,0,0,2.2387947355906,0,0,0,0.622077260032973,2.94157053998399,0.862598491173454,0,1.09209638192014,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0.80057074828547,0.705351887381368,0,11.4970312922663,4.25089728976755,9.09912996625762,6.56372365570416,4.28521883576921,13.3473497255941,8.39673357285626,1.42769420259154,0,0.471878893390961,0,0,0,0,0,0.300841313397029,0,2.34454203369928,0,0,0,14.3855055237181,12.4972495778216,9.30090584255328,12.7465778489753,3.82882366312754,0,0,0,0,4.28561468702629,1.68141861109412,3.03482802118316,4.55324382702595,0.975726071789027,0.345701962667338,0,11.1470362082004,11.2471442792472,0,0,1.17739639275771,6.12750800672407,0.280272163313789,1.82631744101899,0.431855182437243,0.47775168788705,0.78624198594322,1.58013611732727,1.85986280589,0,0,1.24329698497822,0.51215543128185,0,0,1.06498800657509,0.937347452350735,2.54032230114557,0.4582137370881,0.62041277132864,0,0.111855431797792,0,0,0,0.102662806856247,1.1598144313382,0.971421986118279,1.40363678077263,0,0,1.01651473835064,0.879524133963433,2.56636834063345,0.154348316215889,0,0.940634592723046,0,0,5.49663707921847,7.72320640850424,5.0718687310008,0,1.03382309777839,1.74036297528658,0.599646935549574,0,0.352894871715692,0.0802413666891683,0.730336388246517,0,2.15009374727177,0,11.966502273601,2.61810414204226,1.5870805215462,0.371995018166751,0,0,0.504665699340316,0.437062287854782,0,0,0,0,0,0,0,2.48750831837634,4.86135080550908,0,0.476128862927481,0.258355639344024,0.31037357147929,0,0.572824424503484,0.404234377916439,0,0,0.0673520530145875,0.286888821570705,0.665320713092027,0.244209805832924,0,0,0,0,0.244482888365733,1.62758471326295,0,0,0.320568492303233 | |||
|short_description=p3@NRCAM | |||
}} |
Latest revision as of 02:52, 25 September 2015
Short description: | p3@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NRCAM_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 15bp_to_ENST00000379022, ENST00000379028, ENST00000379032, ENST00000413765, ENST00000537765, uc003vfb.2, uc003vfc.2, uc003vfd.2, uc003vfe.2, uc011kmk.1_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | F8W775Q92823F8W774C9JYY6F5GYD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data