FFCP PHASE1:Hg19::chr11:63527205..63527210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10313 | |EntrezGene=10313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10469 | |HGNC=10469 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVW7 | |UniProt=Q9BVW7 | ||
|association_with_transcript=388bp_to_BC000865_5end | |association_with_transcript=388bp_to_BC000865_5end | ||
|cluster_id=chr11:63527205..63527210,+ | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_5_at_RTN3_5end | |description=CAGE_peak_5_at_RTN3_5end | ||
|id=chr11:63527205..63527210,+ | |id=chr11:63527205..63527210,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.38e-12;3!UBERON:0003057;2.38e-12;3!UBERON:0006601;1.32e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-31!57;UBERON:0005068!1.28e-31!57;UBERON:0006241!1.28e-31!57;UBERON:0007135!1.28e-31!57;UBERON:0002020!3.05e-26!34;UBERON:0003528!3.05e-26!34;UBERON:0002780!2.95e-25!41;UBERON:0001890!2.95e-25!41;UBERON:0006240!2.95e-25!41;UBERON:0001017!1.03e-24!82;UBERON:0002616!1.32e-24!59;UBERON:0003080!2.08e-24!42;UBERON:0001893!1.56e-23!34;UBERON:0002346!1.65e-23!90;UBERON:0001869!2.88e-23!32;UBERON:0005743!7.46e-23!86;UBERON:0000955!1.03e-22!69;UBERON:0006238!1.03e-22!69;UBERON:0002791!1.11e-22!33;UBERON:0000073!2.67e-22!94;UBERON:0001016!2.67e-22!94;UBERON:0003075!6.38e-22!86;UBERON:0007284!6.38e-22!86;UBERON:0002619!3.81e-21!22;UBERON:0001950!2.02e-18!20;UBERON:0000956!6.87e-18!25;UBERON:0000203!6.87e-18!25;UBERON:0007023!4.20e-16!115;UBERON:0003056!1.13e-13!61;UBERON:0000924!2.05e-13!173;UBERON:0006601!2.05e-13!173;UBERON:0004121!2.88e-12!169;UBERON:0000153!2.39e-11!129;UBERON:0007811!2.39e-11!129;UBERON:0000033!1.82e-10!123;UBERON:0002420!4.98e-10!9;UBERON:0007245!4.98e-10!9;UBERON:0010009!4.98e-10!9;UBERON:0010011!4.98e-10!9;UBERON:0000454!4.98e-10!9;UBERON:0002308!5.62e-10!9;UBERON:0000125!5.62e-10!9;UBERON:0001871!4.80e-09!7;UBERON:0000200!1.33e-08!6;UBERON:0003076!2.54e-08!15;UBERON:0003057!2.54e-08!15;UBERON:0000349!9.19e-08!5;UBERON:0009663!2.58e-07!7;UBERON:0001872!6.52e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.28e-31!57;UBERON:0005068!1.28e-31!57;UBERON:0006241!1.28e-31!57;UBERON:0007135!1.28e-31!57;UBERON:0002020!3.05e-26!34;UBERON:0003528!3.05e-26!34;UBERON:0002780!2.95e-25!41;UBERON:0001890!2.95e-25!41;UBERON:0006240!2.95e-25!41;UBERON:0001017!1.03e-24!82;UBERON:0002616!1.32e-24!59;UBERON:0003080!2.08e-24!42;UBERON:0001893!1.56e-23!34;UBERON:0002346!1.65e-23!90;UBERON:0001869!2.88e-23!32;UBERON:0005743!7.46e-23!86;UBERON:0000955!1.03e-22!69;UBERON:0006238!1.03e-22!69;UBERON:0002791!1.11e-22!33;UBERON:0000073!2.67e-22!94;UBERON:0001016!2.67e-22!94;UBERON:0003075!6.38e-22!86;UBERON:0007284!6.38e-22!86;UBERON:0002619!3.81e-21!22;UBERON:0001950!2.02e-18!20;UBERON:0000956!6.87e-18!25;UBERON:0000203!6.87e-18!25;UBERON:0007023!4.20e-16!115;UBERON:0003056!1.13e-13!61;UBERON:0000924!2.05e-13!173;UBERON:0006601!2.05e-13!173;UBERON:0004121!2.88e-12!169;UBERON:0000153!2.39e-11!129;UBERON:0007811!2.39e-11!129;UBERON:0000033!1.82e-10!123;UBERON:0002420!4.98e-10!9;UBERON:0007245!4.98e-10!9;UBERON:0010009!4.98e-10!9;UBERON:0010011!4.98e-10!9;UBERON:0000454!4.98e-10!9;UBERON:0002308!5.62e-10!9;UBERON:0000125!5.62e-10!9;UBERON:0001871!4.80e-09!7;UBERON:0000200!1.33e-08!6;UBERON:0003076!2.54e-08!15;UBERON:0003057!2.54e-08!15;UBERON:0000349!9.19e-08!5;UBERON:0009663!2.58e-07!7;UBERON:0001872!6.52e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.95e-36;34!UBERON:0002020;2.95e-36;34!UBERON:0002791;2.52e-30;32!UBERON:0002780;4.78e-30;41!UBERON:0001890;4.78e-30;41!UBERON:0002619;6.75e-30;22!UBERON:0000073;1.88e-29;53!UBERON:0002616;1.88e-29;53!UBERON:0000349;1.01e-28;5!UBERON:0001893;1.84e-27;34!UBERON:0001869;5.75e-27;32!UBERON:0000956;2.62e-26;25!UBERON:0000203;2.62e-26;25!UBERON:0002420;4.63e-24;9!UBERON:0007245;4.63e-24;9!UBERON:0010009;4.63e-24;9!UBERON:0010011;4.63e-24;9!UBERON:0000454;4.63e-24;9!UBERON:0000125;6.63e-24;9!UBERON:0002308;6.63e-24;9!UBERON:0001950;6.88e-20;20!UBERON:0001954;5.36e-19;2!UBERON:0003022;5.36e-19;2!UBERON:0002421;5.36e-19;2!UBERON:0002600;5.36e-19;2!UBERON:0001876;1.20e-18;2!UBERON:0001897;1.63e-18;2!UBERON:0010225;1.63e-18;2!UBERON:0002148;2.32e-18;2!UBERON:0006331;2.32e-18;2!UBERON:0009662;2.32e-18;2!UBERON:0001017;7.69e-16;75!UBERON:0001016;1.11e-13;83!UBERON:0002298;1.49e-13;6!UBERON:0000955;5.83e-13;68!UBERON:0000988;1.45e-12;3!UBERON:0002240;2.38e-12;3!UBERON:0005174;2.38e-12;3!UBERON:0001137;2.38e-12;3!UBERON:0001871;5.93e-12;6!UBERON:0004733;1.04e-11;12!UBERON:0002028;1.04e-11;12!UBERON:0009663;1.07e-11;7!UBERON:0004732;7.96e-11;13!UBERON:0002038;6.91e-10;1!UBERON:0003112;6.91e-10;1!UBERON:0011158;6.91e-10;1!UBERON:0009661;6.91e-10;1!UBERON:0002950;6.91e-10;1!UBERON:0003128;6.91e-10;1!UBERON:0001891;6.91e-10;1!UBERON:0001703;6.91e-10;1!UBERON:0002241;6.91e-10;1!UBERON:0002784;1.01e-09;4!UBERON:0002680;3.26e-09;9!UBERON:0001895;3.26e-09;9!UBERON:0001872;5.99e-08;5!UBERON:0011216;9.26e-08;132!UBERON:0000200;8.15e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.00e-58,56;UBERON:0005068,7.00e-58,56;UBERON:0006241,7.00e-58,56;UBERON:0007135,7.00e-58,56;UBERON:0000073,2.40e-49,53;UBERON:0002616,2.40e-49,53;UBERON:0003528,7.46e-47,34;UBERON:0002020,7.46e-47,34;UBERON:0001017,8.10e-39,81;UBERON:0003075,8.10e-39,82;UBERON:0007284,8.10e-39,82;UBERON:0002780,1.36e-38,41;UBERON:0001890,1.36e-38,41;UBERON:0003080,1.36e-38,41;UBERON:0006240,1.36e-38,41;UBERON:0000955,2.02e-37,68;UBERON:0006238,2.02e-37,68;UBERON:0002346,6.80e-37,86;UBERON:0002791,1.83e-36,32;UBERON:0001016,1.01e-34,89;UBERON:0001893,2.85e-34,34;UBERON:0001869,1.08e-30,32;UBERON:0002619,4.57e-30,22;UBERON:0010371,4.80e-30,104;UBERON:0000349,5.72e-29,5;UBERON:0000956,1.86e-26,25;UBERON:0000203,1.86e-26,25;UBERON:0010314,1.15e-25,132;UBERON:0003056,2.13e-25,61;UBERON:0007023,1.56e-24,114;UBERON:0002420,3.73e-24,9;UBERON:0007245,3.73e-24,9;UBERON:0010009,3.73e-24,9;UBERON:0010011,3.73e-24,9;UBERON:0000454,3.73e-24,9;UBERON:0000125,6.04e-24,9;UBERON:0002308,6.04e-24,9;UBERON:0003076,4.31e-20,15;UBERON:0003057,4.31e-20,15;UBERON:0001950,5.24e-20,20;UBERON:0001954,4.49e-19,2;UBERON:0003022,4.49e-19,2;UBERON:0002421,4.49e-19,2;UBERON:0002600,4.49e-19,2;UBERON:0001876,7.03e-19,2;UBERON:0002148,1.71e-18,2;UBERON:0006331,1.71e-18,2;UBERON:0009662,1.71e-18,2;UBERON:0001897,2.90e-18,2;UBERON:0010225,2.90e-18,2;UBERON:0004121,7.03e-17,171;UBERON:0000924,7.03e-17,171;UBERON:0006601,7.03e-17,171;UBERON:0011216,2.79e-15,223;UBERON:0000025,6.72e-15,192;UBERON:0002298,1.59e-13,6;UBERON:0000988,1.19e-12,3;UBERON:0002240,2.12e-12,3;UBERON:0005174,2.12e-12,3;UBERON:0001137,2.12e-12,3;UBERON:0001871,4.49e-12,6;UBERON:0009663,1.13e-11,7;UBERON:0004733,1.21e-11,12;UBERON:0002028,1.21e-11,12;UBERON:0007277,1.21e-11,12;UBERON:0004111,2.82e-11,240;UBERON:0004732,9.19e-11,13;UBERON:0003112,6.33e-10,1;UBERON:0011158,6.33e-10,1;UBERON:0003128,6.33e-10,1;UBERON:0001703,6.33e-10,1;UBERON:0002241,6.33e-10,1;UBERON:0004761,6.33e-10,1;UBERON:0009617,6.33e-10,1;UBERON:0002038,8.24e-10,1;UBERON:0009661,8.24e-10,1;UBERON:0002950,8.24e-10,1;UBERON:0001891,8.24e-10,1;UBERON:0009616,8.24e-10,1;UBERON:0010286,8.24e-10,1;UBERON:0002784,1.34e-09,4;UBERON:0002680,3.31e-09,9;UBERON:0001895,3.31e-09,9;UBERON:0010092,3.31e-09,9;UBERON:0000483,3.98e-08,306;UBERON:0000119,5.14e-08,309;UBERON:0001872,5.69e-08,5;UBERON:0000200,7.69e-07,6 | |||
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|short_description=p5@RTN3 | |short_description=p5@RTN3 | ||
}} | }} |
Latest revision as of 00:18, 19 September 2015
Short description: | p5@RTN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RTN3_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 388bp_to_BC000865_5end |
EntrezGene: | RTN3 |
HGNC: | 10469 |
UniProt: | Q9BVW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data