FFCP PHASE1:Hg19::chr17:72968809..72968834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283987 | |EntrezGene=283987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15736 | |HGNC=15736 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV36,E9PMS4,E9PIM7 | |UniProt=Q8IV36,E9PMS4,E9PIM7 | ||
|association_with_transcript=0bp_to_ENST00000318565,ENST00000425042,ENST00000525128,ENST00000530857,ENST00000534480_5end | |association_with_transcript=0bp_to_ENST00000318565,ENST00000425042,ENST00000525128,ENST00000530857,ENST00000534480_5end | ||
|cluster_id=chr17:72968809..72968834,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_1_at_C17orf28_5end | |description=CAGE_peak_1_at_C17orf28_5end | ||
|id=chr17:72968809..72968834,- | |id=chr17:72968809..72968834,- | ||
|ontology_enrichment_celltype=CL:0000115!4.75e-12!35;CL:0000066!7.35e-12!254;CL:0002139!1.13e-11!24;CL:0002078!7.76e-11!44;CL:0000071!6.73e-10!18;CL:0002546!6.73e-10!18;CL:0000213!5.77e-07!57;CL:0000215!5.77e-07!57 | |ontology_enrichment_celltype=CL:0000115!4.75e-12!35;CL:0000066!7.35e-12!254;CL:0002139!1.13e-11!24;CL:0002078!7.76e-11!44;CL:0000071!6.73e-10!18;CL:0002546!6.73e-10!18;CL:0000213!5.77e-07!57;CL:0000215!5.77e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.88e-14;24!CL:0000071;4.85e-12;18!CL:0000115;1.02e-11;36!CL:0002078;2.22e-08;45!CL:1000449;5.09e-08;15!CL:0002681;7.39e-07;12!CL:0002584;7.39e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.24e-14,24;CL:0000115,4.12e-14,36;CL:0002078,2.33e-12,45;CL:0000071,5.38e-12,18;CL:0002546,5.38e-12,18;CL:0000066,5.09e-09,253;CL:1000449,4.51e-08,15;CL:0002681,6.47e-07,12;CL:0002584,6.47e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;4.85e-12;18!UBERON:0006601;5.02e-10;82!UBERON:0002532;6.38e-07;206!UBERON:0010316;6.38e-07;206 | |||
|ontology_enrichment_disease=DOID:305!7.21e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-40!115;UBERON:0004111!1.02e-31!241;UBERON:0000025!1.86e-28!194;UBERON:0001049!1.58e-27!57;UBERON:0005068!1.58e-27!57;UBERON:0006241!1.58e-27!57;UBERON:0007135!1.58e-27!57;UBERON:0000477!6.61e-27!286;UBERON:0005743!1.82e-25!86;UBERON:0001017!5.95e-25!82;UBERON:0000073!6.66e-25!94;UBERON:0001016!6.66e-25!94;UBERON:0002616!2.47e-22!59;UBERON:0003080!3.46e-22!42;UBERON:0002780!9.52e-22!41;UBERON:0001890!9.52e-22!41;UBERON:0006240!9.52e-22!41;UBERON:0000955!1.73e-21!69;UBERON:0006238!1.73e-21!69;UBERON:0003075!1.22e-20!86;UBERON:0007284!1.22e-20!86;UBERON:0002346!2.12e-19!90;UBERON:0001893!1.50e-18!34;UBERON:0002020!1.63e-18!34;UBERON:0003528!1.63e-18!34;UBERON:0002791!6.04e-18!33;UBERON:0000483!1.30e-17!309;UBERON:0001869!3.83e-17!32;UBERON:0000119!9.88e-17!312;UBERON:0000064!1.77e-15!219;UBERON:0003056!3.89e-15!61;UBERON:0002619!1.59e-14!22;UBERON:0000481!2.33e-14!347;UBERON:0000153!9.37e-14!129;UBERON:0007811!9.37e-14!129;UBERON:0004121!9.57e-14!169;UBERON:0000033!9.92e-14!123;UBERON:0001950!2.62e-13!20;UBERON:0000924!3.15e-13!173;UBERON:0006601!3.15e-13!173;UBERON:0000956!4.08e-13!25;UBERON:0000203!4.08e-13!25;UBERON:0000480!8.71e-11!626;UBERON:0000468!9.95e-11!659;UBERON:0000467!1.16e-10!625;UBERON:0000475!1.98e-10!365;UBERON:0005177!2.03e-10!107;UBERON:0000922!4.71e-10!612;UBERON:0001986!6.73e-10!18;UBERON:0004638!6.73e-10!18;UBERON:0004852!6.73e-10!18;UBERON:0002050!7.84e-09!605;UBERON:0005423!7.84e-09!605;UBERON:0000923!1.22e-08!604;UBERON:0005291!1.22e-08!604;UBERON:0006598!1.22e-08!604;UBERON:0002532!1.22e-08!604;UBERON:0000487!1.56e-08!22;UBERON:0004921!2.23e-08!129;UBERON:0004185!2.23e-08!129;UBERON:0000489!2.79e-08!32;UBERON:0000466!2.86e-08!126;UBERON:0000464!8.76e-08!104;UBERON:0004119!9.05e-08!169;UBERON:0000925!9.05e-08!169;UBERON:0006595!9.05e-08!169;UBERON:0009569!1.14e-07!113;UBERON:0001007!2.51e-07!155;UBERON:0001555!2.51e-07!155;UBERON:0007026!2.51e-07!155;UBERON:0006914!4.14e-07!25;UBERON:0000080!5.93e-07!18;UBERON:0002120!5.93e-07!18;UBERON:0004875!5.93e-07!18;UBERON:0005721!5.93e-07!18;UBERON:0005754!5.93e-07!18;UBERON:0007297!5.93e-07!18;UBERON:0002308!6.01e-07!9;UBERON:0000125!6.01e-07!9;UBERON:0000077!7.91e-07!130;UBERON:0001008!8.71e-07!45;UBERON:0003887!8.78e-07!21;UBERON:0002420!9.33e-07!9;UBERON:0007245!9.33e-07!9;UBERON:0010009!9.33e-07!9;UBERON:0010011!9.33e-07!9;UBERON:0000454!9.33e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.55e-19;41!UBERON:0001890;5.55e-19;41!UBERON:0001893;8.86e-19;34!UBERON:0003528;1.01e-18;34!UBERON:0002020;1.01e-18;34!UBERON:0002791;1.68e-18;32!UBERON:0001869;2.08e-18;32!UBERON:0002619;9.32e-18;22!UBERON:0000073;1.91e-17;53!UBERON:0002616;1.91e-17;53!UBERON:0001950;3.13e-16;20!UBERON:0000956;1.95e-15;25!UBERON:0000203;1.95e-15;25!UBERON:0007023;5.01e-13;114!UBERON:0004638;4.85e-12;18!UBERON:0001986;4.85e-12;18!UBERON:0004852;4.85e-12;18!UBERON:0001017;3.22e-11;75!UBERON:0000487;7.82e-11;22!UBERON:0000955;1.80e-10;68!UBERON:0001016;8.83e-10;83!UBERON:0000490;8.04e-09;33!UBERON:0000489;8.26e-09;29!UBERON:0006914;1.26e-08;25!UBERON:0000125;2.65e-08;9!UBERON:0002308;2.65e-08;9!UBERON:0002420;4.79e-08;9!UBERON:0007245;4.79e-08;9!UBERON:0010009;4.79e-08;9!UBERON:0010011;4.79e-08;9!UBERON:0000454;4.79e-08;9!UBERON:0006555;5.09e-08;15!UBERON:0004819;5.09e-08;15!UBERON:0001285;5.09e-08;15!UBERON:0007684;5.09e-08;15!UBERON:0000353;3.80e-07;15!UBERON:0006554;4.26e-07;30!UBERON:0001008;4.26e-07;30!UBERON:0001225;7.39e-07;12!UBERON:0008987;7.39e-07;12 | |||
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| ||
|short_description=p1@C17orf28 | |short_description=p1@C17orf28 | ||
}} | }} |
Latest revision as of 09:28, 17 September 2015
Short description: | p1@C17orf28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C17orf28_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000318565, ENST00000425042, ENST00000525128, ENST00000530857, ENST00000534480_5end |
EntrezGene: | C17orf28 |
HGNC: | 15736 |
UniProt: | Q8IV36E9PMS4E9PIM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.24e-14 | 24 |
endothelial cell | 4.12e-14 | 36 |
meso-epithelial cell | 2.33e-12 | 45 |
blood vessel endothelial cell | 5.38e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.38e-12 | 18 |
epithelial cell | 5.09e-09 | 253 |
epithelial cell of nephron | 4.51e-08 | 15 |
kidney cortical cell | 6.47e-07 | 12 |
renal cortical epithelial cell | 6.47e-07 | 12 |