FFCP PHASE1:Hg19::chr17:76870126..76870201,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002jwe.2_5end | |association_with_transcript=0bp_to_uc002jwe.2_5end | ||
|cluster_id=chr17:76870126..76870201,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_10_at_TIMP2_5end | |description=CAGE_peak_10_at_TIMP2_5end | ||
|id=chr17:76870126..76870201,- | |id=chr17:76870126..76870201,- | ||
|ontology_enrichment_celltype=CL:0000148!3.79e-15!10;CL:0000541!3.79e-15!10;CL:0000147!1.70e-12!14;CL:0002567!1.55e-07!3 | |ontology_enrichment_celltype=CL:0000148!3.79e-15!10;CL:0000541!3.79e-15!10;CL:0000147!1.70e-12!14;CL:0002567!1.55e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.48e-17;10!CL:0002567;2.88e-12;3!CL:0000147;4.45e-12;14!CL:0000710;3.85e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.51e-17,10;CL:0000541,2.51e-17,10;CL:0002567,2.73e-12,3;CL:0000147,4.49e-12,14;CL:0000710,3.88e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.93e-18;82!UBERON:0006241;1.98e-12;3!UBERON:0003057;1.98e-12;3!UBERON:0010122;3.74e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.20e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;6.19e-48;34!UBERON:0003528;2.19e-46;34!UBERON:0002020;2.19e-46;34!UBERON:0002791;5.41e-44;32!UBERON:0001869;8.19e-44;32!UBERON:0002780;7.23e-42;41!UBERON:0001890;7.23e-42;41!UBERON:0000073;6.12e-41;53!UBERON:0002616;6.12e-41;53!UBERON:0002619;1.88e-34;22!UBERON:0000125;1.46e-31;9!UBERON:0002308;1.46e-31;9!UBERON:0000956;4.99e-30;25!UBERON:0000203;4.99e-30;25!UBERON:0001950;5.71e-29;20!UBERON:0001017;9.53e-28;75!UBERON:0000955;3.10e-26;68!UBERON:0009663;8.63e-25;7!UBERON:0002420;1.23e-24;9!UBERON:0007245;1.23e-24;9!UBERON:0010009;1.23e-24;9!UBERON:0010011;1.23e-24;9!UBERON:0000454;1.23e-24;9!UBERON:0002298;4.90e-22;6!UBERON:0001016;2.37e-21;83!UBERON:0004732;4.75e-17;13!UBERON:0007023;6.99e-15;114!UBERON:0000369;1.80e-14;4!UBERON:0002435;1.80e-14;4!UBERON:0000204;1.80e-14;4!UBERON:0000200;2.98e-14;6!UBERON:0004733;3.86e-14;12!UBERON:0002028;3.86e-14;12!UBERON:0002240;1.98e-12;3!UBERON:0005174;1.98e-12;3!UBERON:0001137;1.98e-12;3!UBERON:0000988;4.34e-12;3!UBERON:0001896;1.08e-11;3!UBERON:0005290;1.08e-11;3!UBERON:0000349;2.08e-11;5!UBERON:0001872;2.90e-11;5!UBERON:0005383;4.00e-11;3!UBERON:0005382;4.00e-11;3!UBERON:0011216;1.16e-09;132!UBERON:0005162;5.32e-09;2!UBERON:0000122;5.32e-09;2!UBERON:0001897;1.22e-08;2!UBERON:0010225;1.22e-08;2!UBERON:0001875;1.47e-08;2!UBERON:0006514;1.47e-08;2!UBERON:0002148;1.74e-08;2!UBERON:0006331;1.74e-08;2!UBERON:0009662;1.74e-08;2!UBERON:0001873;3.74e-08;2!UBERON:0001871;4.37e-08;6!UBERON:0001954;9.09e-08;2!UBERON:0003022;9.09e-08;2!UBERON:0002421;9.09e-08;2!UBERON:0002600;9.09e-08;2!UBERON:0002771;9.25e-08;2!UBERON:0010314;1.40e-07;132!UBERON:0002021;6.51e-07;5 | |||
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|short_description=p10@TIMP2 | |short_description=p10@TIMP2 | ||
}} | }} |
Latest revision as of 23:25, 17 September 2015
Short description: | p10@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TIMP2_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 0bp_to_uc002jwe.2_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.51e-17 | 10 |
melanoblast | 2.51e-17 | 10 |
light melanocyte | 2.73e-12 | 3 |
pigment cell | 4.49e-12 | 14 |
neurecto-epithelial cell | 3.88e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.20e-08 | 2 |