FFCP PHASE1:Hg19::chr9:139912749..139912794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_uc004ckn.1_5end | |association_with_transcript=8bp_to_uc004ckn.1_5end | ||
|cluster_id=chr9:139912749..139912794,- | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_8_at_ABCA2_5end | |description=CAGE_peak_8_at_ABCA2_5end | ||
|id=chr9:139912749..139912794,- | |id=chr9:139912749..139912794,- | ||
|ontology_enrichment_celltype=CL:0000039!3.00e-09!7;CL:0000586!3.00e-09!7 | |ontology_enrichment_celltype=CL:0000039!3.00e-09!7;CL:0000586!3.00e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.86e-17;7!CL:0000586;3.86e-17;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.39e-17,7;CL:0000586,4.39e-17,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.47e-12;10!UBERON:0005564;3.47e-12;10!UBERON:0006241;2.37e-10;3!UBERON:0003057;2.37e-10;3!UBERON:0006222;2.20e-08;1!UBERON:0005425;2.20e-08;1!UBERON:0006601;2.93e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.68e-22!57;UBERON:0005068!5.68e-22!57;UBERON:0006241!5.68e-22!57;UBERON:0007135!5.68e-22!57;UBERON:0005743!1.46e-19!86;UBERON:0002616!7.52e-19!59;UBERON:0000955!1.68e-18!69;UBERON:0006238!1.68e-18!69;UBERON:0001017!2.76e-18!82;UBERON:0000073!5.43e-18!94;UBERON:0001016!5.43e-18!94;UBERON:0002346!1.66e-16!90;UBERON:0002780!5.64e-16!41;UBERON:0001890!5.64e-16!41;UBERON:0006240!5.64e-16!41;UBERON:0001893!7.60e-16!34;UBERON:0002020!9.85e-16!34;UBERON:0003528!9.85e-16!34;UBERON:0003075!1.47e-15!86;UBERON:0007284!1.47e-15!86;UBERON:0003080!2.33e-15!42;UBERON:0002791!4.54e-15!33;UBERON:0001869!6.86e-14!32;UBERON:0007023!8.52e-14!115;UBERON:0002619!1.15e-11!22;UBERON:0000153!4.35e-11!129;UBERON:0007811!4.35e-11!129;UBERON:0003056!7.64e-11!61;UBERON:0000033!1.33e-10!123;UBERON:0001950!8.13e-10!20;UBERON:0000956!1.22e-09!25;UBERON:0000203!1.22e-09!25;UBERON:0000924!1.53e-08!173;UBERON:0006601!1.53e-08!173;UBERON:0002308!3.56e-08!9;UBERON:0000125!3.56e-08!9;UBERON:0003076!6.33e-08!15;UBERON:0003057!6.33e-08!15;UBERON:0004121!7.19e-08!169;UBERON:0004732!9.56e-08!13;UBERON:0002298!2.44e-07!8;UBERON:0004733!8.90e-07!12;UBERON:0002028!8.90e-07!12;UBERON:0007277!8.90e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!5.68e-22!57;UBERON:0005068!5.68e-22!57;UBERON:0006241!5.68e-22!57;UBERON:0007135!5.68e-22!57;UBERON:0005743!1.46e-19!86;UBERON:0002616!7.52e-19!59;UBERON:0000955!1.68e-18!69;UBERON:0006238!1.68e-18!69;UBERON:0001017!2.76e-18!82;UBERON:0000073!5.43e-18!94;UBERON:0001016!5.43e-18!94;UBERON:0002346!1.66e-16!90;UBERON:0002780!5.64e-16!41;UBERON:0001890!5.64e-16!41;UBERON:0006240!5.64e-16!41;UBERON:0001893!7.60e-16!34;UBERON:0002020!9.85e-16!34;UBERON:0003528!9.85e-16!34;UBERON:0003075!1.47e-15!86;UBERON:0007284!1.47e-15!86;UBERON:0003080!2.33e-15!42;UBERON:0002791!4.54e-15!33;UBERON:0001869!6.86e-14!32;UBERON:0007023!8.52e-14!115;UBERON:0002619!1.15e-11!22;UBERON:0000153!4.35e-11!129;UBERON:0007811!4.35e-11!129;UBERON:0003056!7.64e-11!61;UBERON:0000033!1.33e-10!123;UBERON:0001950!8.13e-10!20;UBERON:0000956!1.22e-09!25;UBERON:0000203!1.22e-09!25;UBERON:0000924!1.53e-08!173;UBERON:0006601!1.53e-08!173;UBERON:0002308!3.56e-08!9;UBERON:0000125!3.56e-08!9;UBERON:0003076!6.33e-08!15;UBERON:0003057!6.33e-08!15;UBERON:0004121!7.19e-08!169;UBERON:0004732!9.56e-08!13;UBERON:0002298!2.44e-07!8;UBERON:0004733!8.90e-07!12;UBERON:0002028!8.90e-07!12;UBERON:0007277!8.90e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.21e-16;41!UBERON:0001890;8.21e-16;41!UBERON:0001875;2.08e-15;2!UBERON:0005162;2.08e-15;2!UBERON:0000122;2.08e-15;2!UBERON:0006514;2.08e-15;2!UBERON:0000473;3.41e-15;8!UBERON:0000073;1.86e-13;53!UBERON:0002616;1.86e-13;53!UBERON:0001893;5.86e-12;34!UBERON:0002791;1.09e-11;32!UBERON:0001017;1.32e-11;75!UBERON:0003135;4.33e-11;11!UBERON:0001896;2.37e-10;3!UBERON:0002240;2.37e-10;3!UBERON:0005174;2.37e-10;3!UBERON:0005290;2.37e-10;3!UBERON:0001137;2.37e-10;3!UBERON:0009663;5.79e-10;7!UBERON:0001869;2.95e-09;32!UBERON:0000955;4.68e-09;68!UBERON:0002038;7.27e-09;1!UBERON:0009661;7.27e-09;1!UBERON:0002950;7.27e-09;1!UBERON:0001891;7.27e-09;1!UBERON:0002336;9.80e-09;1!UBERON:0011215;9.80e-09;1!UBERON:0001018;9.80e-09;1!UBERON:0002473;9.80e-09;1!UBERON:0005340;9.80e-09;1!UBERON:0003544;9.80e-09;1!UBERON:0005970;9.80e-09;1!UBERON:0002316;9.80e-09;1!UBERON:0001020;9.80e-09;1!UBERON:0002437;9.80e-09;1!UBERON:0001016;2.01e-08;83!UBERON:0003112;2.20e-08;1!UBERON:0000941;2.20e-08;1!UBERON:0001785;2.20e-08;1!UBERON:0002464;2.20e-08;1!UBERON:0004904;2.20e-08;1!UBERON:0011158;2.20e-08;1!UBERON:0001021;2.20e-08;1!UBERON:0003128;2.20e-08;1!UBERON:0001703;2.20e-08;1!UBERON:0002241;2.20e-08;1!UBERON:0003528;5.16e-08;34!UBERON:0002020;5.16e-08;34!UBERON:0002420;7.49e-08;9!UBERON:0000125;7.49e-08;9!UBERON:0007245;7.49e-08;9!UBERON:0002308;7.49e-08;9!UBERON:0010009;7.49e-08;9!UBERON:0010011;7.49e-08;9!UBERON:0000454;7.49e-08;9!UBERON:0002619;1.38e-07;22!UBERON:0007023;9.17e-07;114!UBERON:0002021;9.97e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.58e-25,56;UBERON:0005068,2.58e-25,56;UBERON:0006241,2.58e-25,56;UBERON:0007135,2.58e-25,56;UBERON:0001016,8.96e-22,89;UBERON:0001017,1.06e-21,81;UBERON:0000955,3.03e-20,68;UBERON:0006238,3.03e-20,68;UBERON:0000073,5.38e-20,53;UBERON:0002616,5.38e-20,53;UBERON:0003075,6.34e-19,82;UBERON:0007284,6.34e-19,82;UBERON:0002780,7.95e-19,41;UBERON:0001890,7.95e-19,41;UBERON:0003080,7.95e-19,41;UBERON:0006240,7.95e-19,41;UBERON:0002346,6.50e-18,86;UBERON:0007023,6.46e-17,114;UBERON:0001875,1.25e-15,2;UBERON:0006514,1.25e-15,2;UBERON:0005162,2.24e-15,2;UBERON:0000122,2.24e-15,2;UBERON:0001893,3.17e-15,34;UBERON:0000473,3.42e-15,8;UBERON:0003056,1.66e-14,61;UBERON:0010371,2.56e-14,104;UBERON:0010314,6.67e-14,132;UBERON:0002791,8.51e-13,32;UBERON:0003528,5.30e-12,34;UBERON:0002020,5.30e-12,34;UBERON:0003135,4.34e-11,11;UBERON:0002240,2.38e-10,3;UBERON:0005174,2.38e-10,3;UBERON:0001137,2.38e-10,3;UBERON:0001896,2.74e-10,3;UBERON:0005290,2.74e-10,3;UBERON:0010096,2.74e-10,3;UBERON:0009663,4.90e-10,7;UBERON:0004121,6.95e-10,171;UBERON:0000924,6.95e-10,171;UBERON:0006601,6.95e-10,171;UBERON:0001869,8.58e-10,32;UBERON:0002038,8.15e-09,1;UBERON:0009661,8.15e-09,1;UBERON:0002950,8.15e-09,1;UBERON:0001891,8.15e-09,1;UBERON:0009616,8.15e-09,1;UBERON:0010286,8.15e-09,1;UBERON:0002336,1.02e-08,1;UBERON:0011215,1.02e-08,1;UBERON:0001018,1.02e-08,1;UBERON:0002473,1.02e-08,1;UBERON:0005340,1.02e-08,1;UBERON:0003544,1.02e-08,1;UBERON:0005970,1.02e-08,1;UBERON:0002316,1.02e-08,1;UBERON:0001020,1.02e-08,1;UBERON:0002437,1.02e-08,1;UBERON:0000941,2.29e-08,1;UBERON:0001785,2.29e-08,1;UBERON:0002464,2.29e-08,1;UBERON:0004904,2.29e-08,1;UBERON:0001021,2.29e-08,1;UBERON:0003902,2.29e-08,1;UBERON:0005425,2.29e-08,1;UBERON:0003112,2.64e-08,1;UBERON:0011158,2.64e-08,1;UBERON:0003128,2.64e-08,1;UBERON:0001703,2.64e-08,1;UBERON:0002241,2.64e-08,1;UBERON:0004761,2.64e-08,1;UBERON:0009617,2.64e-08,1;UBERON:0002420,6.59e-08,9;UBERON:0000125,6.59e-08,9;UBERON:0007245,6.59e-08,9;UBERON:0002308,6.59e-08,9;UBERON:0010009,6.59e-08,9;UBERON:0010011,6.59e-08,9;UBERON:0000454,6.59e-08,9;UBERON:0011216,9.50e-08,223;UBERON:0003076,1.13e-07,15;UBERON:0003057,1.13e-07,15;UBERON:0002619,1.58e-07,22;UBERON:0000025,2.08e-07,192;UBERON:0002021,9.98e-07,5 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0.270803863765016,0,0.390178042679635,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,1.14734648299525,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0.37223371266318,0,0,0,0,0,0,0.10075209822764,0,0,0,0,1.70763188581434,0.397589304964456,0.580969714347592,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0.213455115606889,0,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0.483437798366489,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0.313359791546046,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.222886768554957,0.284136146806413,0,0,0.307160702099232,0,0.562677665642051,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.834912883456661,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.723578631752448,0,0.442317039724898,0.886642856860642,0.219385397153973,0.21787692703798,0,0,0.113942055847001,1.1528195219403,0.628303510868405,0.760531603454056,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0.123563938946503,0,2.29163852134302,0,1.87411556580271,0,0.19566461893209,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0.451961481561065,0.137041924646751,0,0.379864775735272,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,1.80126086612937,2.87501295673185,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.79339561045614,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.976210119215705,1.251909307065,1.14681839138014,1.66393577305278,0.683060432355218,0,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0.414775308455192,0,0,0.163565394255844,0.655219697692825,0,0,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0.352675943690684,0,0.513833800771676,0,1.43670473151436,3.07674546361133,0,0.138314504928436,1.29180516505481,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.405225507710368,0.781078098613847,1.03343398250592,0.824405532520789,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0.475788130837822,0.789273282754189,0,0,0,0.314231179832004,0,0,0,0,0.214429632529969,0.316027223465453,0,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,1.37415926980462,1.48523200163543,0,0,0,0.0644578879735772,0,0,0,0,0,0,3.01013124618048,0,0.815897882290976,0.872701380680755,0,0,0,0,0.126166424835079,0,0,6.62927393322881,2.93939145792117,0.827054095813604,36.8540082759791,0.606229585745915,2.14371304124943,0.82916943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| ||
|short_description=p8@ABCA2 | |short_description=p8@ABCA2 | ||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p8@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ABCA2_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 8bp_to_uc004ckn.1_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.39e-17 | 7 |
germ cell | 4.39e-17 | 7 |