FFCP PHASE1:Hg19::chr5:140874355..140874403,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:140874355..140874403,+ | |||
|description=CAGE_peak_at_chr5:140874355..140874403,+ | |description=CAGE_peak_at_chr5:140874355..140874403,+ | ||
|id=chr5:140874355..140874403,+ | |id=chr5:140874355..140874403,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.82e-08!59;CL:0000148!1.88e-07!10;CL:0000541!1.88e-07!10;CL:0000221!6.77e-07!71 | |ontology_enrichment_celltype=CL:0000133!1.82e-08!59;CL:0000148!1.88e-07!10;CL:0000541!1.88e-07!10;CL:0000221!6.77e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.03e-13;10!CL:0000147;2.52e-09;14!CL:0000710;1.11e-07;20!CL:0000128;4.13e-07;7!CL:0000126;4.13e-07;7!CL:0000127;4.13e-07;7!CL:0002603;7.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.67e-14,10;CL:0000541,4.67e-14,10;CL:0000333,1.41e-10,41;CL:0000133,1.61e-10,59;CL:0000147,1.47e-09,14;CL:0000710,7.27e-08,20;CL:0000221,9.79e-08,72;CL:0000128,4.86e-07,7;CL:0000126,4.86e-07,7;CL:0000127,4.86e-07,7;CL:0002453,4.86e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.20e-12;82!UBERON:0006241;3.45e-07;3!UBERON:0006215;3.45e-07;3!UBERON:0003057;3.45e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;2.15e-08;22!DOID:2994;2.15e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.95e-08,22;DOID:2994,1.95e-08,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;2.45e-39;53!UBERON:0002616;2.45e-39;53!UBERON:0002791;2.73e-33;32!UBERON:0001893;2.86e-33;34!UBERON:0003528;1.10e-32;34!UBERON:0002020;1.10e-32;34!UBERON:0001869;1.30e-32;32!UBERON:0002780;4.05e-30;41!UBERON:0001890;4.05e-30;41!UBERON:0000956;6.63e-30;25!UBERON:0000203;6.63e-30;25!UBERON:0002619;4.06e-28;22!UBERON:0001950;1.18e-24;20!UBERON:0001017;2.20e-24;75!UBERON:0004733;5.13e-24;12!UBERON:0002028;5.13e-24;12!UBERON:0000955;3.35e-23;68!UBERON:0001016;4.85e-22;83!UBERON:0004732;6.29e-22;13!UBERON:0002680;6.66e-18;9!UBERON:0001895;6.66e-18;9!UBERON:0002298;2.55e-13;6!UBERON:0002037;2.18e-12;6!UBERON:0002420;2.10e-11;9!UBERON:0007245;2.10e-11;9!UBERON:0010009;2.10e-11;9!UBERON:0010011;2.10e-11;9!UBERON:0000454;2.10e-11;9!UBERON:0000125;3.81e-11;9!UBERON:0002308;3.81e-11;9!UBERON:0000349;4.10e-11;5!UBERON:0011216;1.82e-08;132!UBERON:0000200;4.28e-08;6!UBERON:0009663;8.38e-08;7!UBERON:0001896;8.44e-08;3!UBERON:0005290;8.44e-08;3!UBERON:0001871;1.10e-07;6!UBERON:0007023;1.48e-07;114!UBERON:0000988;3.45e-07;3!UBERON:0002240;3.45e-07;3!UBERON:0005174;3.45e-07;3!UBERON:0001137;3.45e-07;3!UBERON:0002021;3.58e-07;5!UBERON:0002050;6.57e-07;5!UBERON:0005423;6.57e-07;5 | |||
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|short_description=p@chr5:140874355..140874403,+ | |short_description=p@chr5:140874355..140874403,+ | ||
}} | }} |
Latest revision as of 10:41, 30 July 2015
Short description: | p@chr5:140874355..140874403, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:140874355..140874403, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.67e-14 | 10 |
melanoblast | 4.67e-14 | 10 |
migratory neural crest cell | 1.41e-10 | 41 |
neurectodermal cell | 1.61e-10 | 59 |
pigment cell | 1.47e-09 | 14 |
neurecto-epithelial cell | 7.27e-08 | 20 |
ectodermal cell | 9.79e-08 | 72 |
oligodendrocyte | 4.86e-07 | 7 |
macroglial cell | 4.86e-07 | 7 |
astrocyte | 4.86e-07 | 7 |
oligodendrocyte precursor cell | 4.86e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.95e-08 | 22 |
germ cell cancer | 1.95e-08 | 22 |