FFCP PHASE1:Hg19::chr6:152957944..152957985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NF91 | |UniProt=Q8NF91 | ||
|association_with_transcript=0bp_to_ENST00000423061,NM_033071,uc003qot.3_5end | |association_with_transcript=0bp_to_ENST00000423061,NM_033071,uc003qot.3_5end | ||
|cluster_id=chr6:152957944..152957985,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_SYNE1_5end | |description=CAGE_peak_7_at_SYNE1_5end | ||
|id=chr6:152957944..152957985,- | |id=chr6:152957944..152957985,- | ||
|ontology_enrichment_celltype=CL:0000625!2.04e-08!11;CL:0000791!8.89e-07!18;CL:0000789!8.89e-07!18;CL:0002420!8.89e-07!18;CL:0002419!8.89e-07!18;CL:0000790!8.89e-07!18 | |ontology_enrichment_celltype=CL:0000625!2.04e-08!11;CL:0000791!8.89e-07!18;CL:0000789!8.89e-07!18;CL:0002420!8.89e-07!18;CL:0002419!8.89e-07!18;CL:0000790!8.89e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.06e-10;11!CL:0000623;6.84e-08;3!CL:0000791;1.88e-07;18!CL:0000789;1.88e-07;18!CL:0002419;1.88e-07;18!CL:0000775;2.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.13e-10,11;CL:0000623,6.15e-08,3;CL:0000825,6.15e-08,3;CL:0000791,2.17e-07,18;CL:0000789,2.17e-07,18;CL:0002420,2.17e-07,18;CL:0002419,2.17e-07,18;CL:0000790,2.17e-07,18;CL:0000775,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.57e-11;82!UBERON:0006215;3.19e-08;3!CL:0000790;1.88e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.68e-53!115;UBERON:0001049!2.11e-34!57;UBERON:0005068!2.11e-34!57;UBERON:0006241!2.11e-34!57;UBERON:0007135!2.11e-34!57;UBERON:0001017!1.16e-28!82;UBERON:0000955!4.71e-28!69;UBERON:0006238!4.71e-28!69;UBERON:0002616!5.16e-28!59;UBERON:0005743!1.63e-27!86;UBERON:0002780!2.93e-27!41;UBERON:0001890!2.93e-27!41;UBERON:0006240!2.93e-27!41;UBERON:0003080!2.85e-26!42;UBERON:0000073!5.19e-26!94;UBERON:0001016!5.19e-26!94;UBERON:0002020!7.34e-25!34;UBERON:0003528!7.34e-25!34;UBERON:0001893!9.94e-25!34;UBERON:0002791!1.11e-23!33;UBERON:0001869!1.12e-23!32;UBERON:0003075!5.54e-22!86;UBERON:0007284!5.54e-22!86;UBERON:0002619!3.67e-21!22;UBERON:0002346!4.74e-21!90;UBERON:0001950!3.08e-19!20;UBERON:0000956!1.19e-17!25;UBERON:0000203!1.19e-17!25;UBERON:0003056!1.28e-15!61;UBERON:0000153!1.72e-15!129;UBERON:0007811!1.72e-15!129;UBERON:0000033!3.44e-13!123;UBERON:0004121!3.70e-10!169;UBERON:0000924!6.12e-10!173;UBERON:0006601!6.12e-10!173;UBERON:0003076!3.56e-09!15;UBERON:0003057!3.56e-09!15;UBERON:0002420!5.98e-09!9;UBERON:0007245!5.98e-09!9;UBERON:0010009!5.98e-09!9;UBERON:0010011!5.98e-09!9;UBERON:0000454!5.98e-09!9;UBERON:0002308!1.02e-08!9;UBERON:0000125!1.02e-08!9;UBERON:0004732!5.88e-08!13;UBERON:0000200!7.91e-08!6;UBERON:0004733!3.13e-07!12;UBERON:0002028!3.13e-07!12;UBERON:0007277!3.13e-07!12;UBERON:0000178!6.23e-07!15;UBERON:0000179!6.23e-07!15;UBERON:0000463!6.23e-07!15;UBERON:0009663!6.44e-07!7;UBERON:0001871!8.59e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!4.68e-53!115;UBERON:0001049!2.11e-34!57;UBERON:0005068!2.11e-34!57;UBERON:0006241!2.11e-34!57;UBERON:0007135!2.11e-34!57;UBERON:0001017!1.16e-28!82;UBERON:0000955!4.71e-28!69;UBERON:0006238!4.71e-28!69;UBERON:0002616!5.16e-28!59;UBERON:0005743!1.63e-27!86;UBERON:0002780!2.93e-27!41;UBERON:0001890!2.93e-27!41;UBERON:0006240!2.93e-27!41;UBERON:0003080!2.85e-26!42;UBERON:0000073!5.19e-26!94;UBERON:0001016!5.19e-26!94;UBERON:0002020!7.34e-25!34;UBERON:0003528!7.34e-25!34;UBERON:0001893!9.94e-25!34;UBERON:0002791!1.11e-23!33;UBERON:0001869!1.12e-23!32;UBERON:0003075!5.54e-22!86;UBERON:0007284!5.54e-22!86;UBERON:0002619!3.67e-21!22;UBERON:0002346!4.74e-21!90;UBERON:0001950!3.08e-19!20;UBERON:0000956!1.19e-17!25;UBERON:0000203!1.19e-17!25;UBERON:0003056!1.28e-15!61;UBERON:0000153!1.72e-15!129;UBERON:0007811!1.72e-15!129;UBERON:0000033!3.44e-13!123;UBERON:0004121!3.70e-10!169;UBERON:0000924!6.12e-10!173;UBERON:0006601!6.12e-10!173;UBERON:0003076!3.56e-09!15;UBERON:0003057!3.56e-09!15;UBERON:0002420!5.98e-09!9;UBERON:0007245!5.98e-09!9;UBERON:0010009!5.98e-09!9;UBERON:0010011!5.98e-09!9;UBERON:0000454!5.98e-09!9;UBERON:0002308!1.02e-08!9;UBERON:0000125!1.02e-08!9;UBERON:0004732!5.88e-08!13;UBERON:0000200!7.91e-08!6;UBERON:0004733!3.13e-07!12;UBERON:0002028!3.13e-07!12;UBERON:0007277!3.13e-07!12;UBERON:0000178!6.23e-07!15;UBERON:0000179!6.23e-07!15;UBERON:0000463!6.23e-07!15;UBERON:0009663!6.44e-07!7;UBERON:0001871!8.59e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.29e-37;32!UBERON:0003528;7.64e-36;34!UBERON:0002020;7.64e-36;34!UBERON:0002619;7.70e-35;22!UBERON:0002791;2.57e-34;32!UBERON:0001893;4.26e-33;34!UBERON:0000073;7.52e-32;53!UBERON:0002616;7.52e-32;53!UBERON:0002780;1.28e-31;41!UBERON:0001890;1.28e-31;41!UBERON:0001950;4.13e-31;20!UBERON:0000956;4.46e-30;25!UBERON:0000203;4.46e-30;25!UBERON:0000955;2.70e-22;68!UBERON:0001017;4.89e-21;75!UBERON:0001016;5.94e-17;83!UBERON:0007023;3.01e-16;114!UBERON:0004732;2.98e-15;13!UBERON:0000200;7.75e-14;6!UBERON:0004733;8.09e-14;12!UBERON:0002028;8.09e-14;12!UBERON:0000178;2.01e-13;15!UBERON:0000179;2.01e-13;15!UBERON:0000463;2.01e-13;15!UBERON:0002420;2.31e-13;9!UBERON:0007245;2.31e-13;9!UBERON:0010009;2.31e-13;9!UBERON:0010011;2.31e-13;9!UBERON:0000454;2.31e-13;9!UBERON:0000125;8.02e-13;9!UBERON:0002308;8.02e-13;9!UBERON:0002298;1.22e-12;6!UBERON:0000349;1.74e-11;5!UBERON:0002021;5.92e-11;5!UBERON:0009663;1.60e-09;7!UBERON:0002680;1.13e-08;9!UBERON:0001895;1.13e-08;9!UBERON:0000369;2.62e-08;4!UBERON:0002435;2.62e-08;4!UBERON:0000204;2.62e-08;4!UBERON:0001871;4.40e-08;6!UBERON:0001870;5.85e-08;3!UBERON:0001872;9.76e-08;5!UBERON:0001894;1.64e-07;7!UBERON:0001896;2.51e-07;3!UBERON:0005290;2.51e-07;3!UBERON:0000988;5.74e-07;3 | |||
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|short_description=p7@SYNE1 | |short_description=p7@SYNE1 | ||
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Latest revision as of 07:07, 16 September 2015
Short description: | p7@SYNE1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SYNE1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000423061, NM_033071, uc003qot.3_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | Q8NF91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.13e-10 | 11 |
natural killer cell | 6.15e-08 | 3 |
pro-NK cell | 6.15e-08 | 3 |
mature alpha-beta T cell | 2.17e-07 | 18 |
alpha-beta T cell | 2.17e-07 | 18 |
immature T cell | 2.17e-07 | 18 |
mature T cell | 2.17e-07 | 18 |
immature alpha-beta T cell | 2.17e-07 | 18 |
neutrophil | 2.63e-07 | 3 |