FFCP PHASE1:Hg19::chr11:64490634..64490674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9379 | |EntrezGene=9379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8009 | |HGNC=8009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2S2,F8W812 | |UniProt=Q9P2S2,F8W812 | ||
|association_with_transcript=0bp_to_ENST00000265459,ENST00000345863,ENST00000377559,NM_015080,NM_138732,uc001oar.2,uc001oas.2_5end | |association_with_transcript=0bp_to_ENST00000265459,ENST00000345863,ENST00000377559,NM_015080,NM_138732,uc001oar.2,uc001oas.2_5end | ||
|cluster_id=chr11:64490634..64490674,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_2_at_NRXN2_5end | |description=CAGE_peak_2_at_NRXN2_5end | ||
|id=chr11:64490634..64490674,- | |id=chr11:64490634..64490674,- | ||
|ontology_enrichment_celltype=CL:0000047!1.21e-10!8;CL:0000540!2.74e-08!6;CL:0000031!2.74e-08!6;CL:0000404!2.74e-08!6 | |ontology_enrichment_celltype=CL:0000047!1.21e-10!8;CL:0000540!2.74e-08!6;CL:0000031!2.74e-08!6;CL:0000404!2.74e-08!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.06e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.74e-19;82!UBERON:0006215;4.65e-09;3!UBERON:0006241;1.04e-08;3!UBERON:0003057;1.04e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.75e-65!82;UBERON:0000073!8.14e-64!94;UBERON:0001016!8.14e-64!94;UBERON:0005743!4.34e-63!86;UBERON:0001049!4.62e-61!57;UBERON:0005068!4.62e-61!57;UBERON:0006241!4.62e-61!57;UBERON:0007135!4.62e-61!57;UBERON:0002616!2.43e-50!59;UBERON:0000955!1.80e-48!69;UBERON:0006238!1.80e-48!69;UBERON:0002780!1.96e-48!41;UBERON:0001890!1.96e-48!41;UBERON:0006240!1.96e-48!41;UBERON:0003080!5.58e-47!42;UBERON:0001893!5.86e-45!34;UBERON:0002020!6.99e-45!34;UBERON:0003528!6.99e-45!34;UBERON:0002791!2.03e-43!33;UBERON:0001869!6.18e-42!32;UBERON:0003075!1.72e-41!86;UBERON:0007284!1.72e-41!86;UBERON:0002346!7.70e-39!90;UBERON:0007023!1.88e-36!115;UBERON:0000956!3.18e-32!25;UBERON:0000203!3.18e-32!25;UBERON:0002619!5.35e-32!22;UBERON:0004121!2.89e-31!169;UBERON:0003056!3.69e-30!61;UBERON:0000924!5.02e-30!173;UBERON:0006601!5.02e-30!173;UBERON:0001950!3.51e-29!20;UBERON:0000153!1.85e-24!129;UBERON:0007811!1.85e-24!129;UBERON:0000033!2.45e-24!123;UBERON:0003076!1.17e-14!15;UBERON:0003057!1.17e-14!15;UBERON:0002308!5.89e-14!9;UBERON:0000125!5.89e-14!9;UBERON:0002420!7.88e-14!9;UBERON:0007245!7.88e-14!9;UBERON:0010009!7.88e-14!9;UBERON:0010011!7.88e-14!9;UBERON:0000454!7.88e-14!9;UBERON:0004732!5.12e-12!13;UBERON:0000025!2.30e-11!194;UBERON:0009663!5.36e-11!7;UBERON:0004733!1.52e-10!12;UBERON:0002028!1.52e-10!12;UBERON:0007277!1.52e-10!12;UBERON:0000200!4.35e-10!6;UBERON:0002298!4.99e-10!8;UBERON:0001871!5.06e-10!7;UBERON:0002021!3.19e-09!5;UBERON:0001872!5.35e-09!5;UBERON:0000349!9.79e-09!5;UBERON:0000064!2.64e-08!219;UBERON:0004111!3.98e-07!241;UBERON:0000369!5.68e-07!4;UBERON:0002435!5.68e-07!4;UBERON:0000204!5.68e-07!4;UBERON:0010082!5.68e-07!4;UBERON:0002680!9.45e-07!9;UBERON:0001895!9.45e-07!9;UBERON:0010092!9.45e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!7.75e-65!82;UBERON:0000073!8.14e-64!94;UBERON:0001016!8.14e-64!94;UBERON:0005743!4.34e-63!86;UBERON:0001049!4.62e-61!57;UBERON:0005068!4.62e-61!57;UBERON:0006241!4.62e-61!57;UBERON:0007135!4.62e-61!57;UBERON:0002616!2.43e-50!59;UBERON:0000955!1.80e-48!69;UBERON:0006238!1.80e-48!69;UBERON:0002780!1.96e-48!41;UBERON:0001890!1.96e-48!41;UBERON:0006240!1.96e-48!41;UBERON:0003080!5.58e-47!42;UBERON:0001893!5.86e-45!34;UBERON:0002020!6.99e-45!34;UBERON:0003528!6.99e-45!34;UBERON:0002791!2.03e-43!33;UBERON:0001869!6.18e-42!32;UBERON:0003075!1.72e-41!86;UBERON:0007284!1.72e-41!86;UBERON:0002346!7.70e-39!90;UBERON:0007023!1.88e-36!115;UBERON:0000956!3.18e-32!25;UBERON:0000203!3.18e-32!25;UBERON:0002619!5.35e-32!22;UBERON:0004121!2.89e-31!169;UBERON:0003056!3.69e-30!61;UBERON:0000924!5.02e-30!173;UBERON:0006601!5.02e-30!173;UBERON:0001950!3.51e-29!20;UBERON:0000153!1.85e-24!129;UBERON:0007811!1.85e-24!129;UBERON:0000033!2.45e-24!123;UBERON:0003076!1.17e-14!15;UBERON:0003057!1.17e-14!15;UBERON:0002308!5.89e-14!9;UBERON:0000125!5.89e-14!9;UBERON:0002420!7.88e-14!9;UBERON:0007245!7.88e-14!9;UBERON:0010009!7.88e-14!9;UBERON:0010011!7.88e-14!9;UBERON:0000454!7.88e-14!9;UBERON:0004732!5.12e-12!13;UBERON:0000025!2.30e-11!194;UBERON:0009663!5.36e-11!7;UBERON:0004733!1.52e-10!12;UBERON:0002028!1.52e-10!12;UBERON:0007277!1.52e-10!12;UBERON:0000200!4.35e-10!6;UBERON:0002298!4.99e-10!8;UBERON:0001871!5.06e-10!7;UBERON:0002021!3.19e-09!5;UBERON:0001872!5.35e-09!5;UBERON:0000349!9.79e-09!5;UBERON:0000064!2.64e-08!219;UBERON:0004111!3.98e-07!241;UBERON:0000369!5.68e-07!4;UBERON:0002435!5.68e-07!4;UBERON:0000204!5.68e-07!4;UBERON:0010082!5.68e-07!4;UBERON:0002680!9.45e-07!9;UBERON:0001895!9.45e-07!9;UBERON:0010092!9.45e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.61e-54;34!UBERON:0003528;9.31e-54;34!UBERON:0002020;9.31e-54;34!UBERON:0001869;5.94e-53;32!UBERON:0002791;8.41e-53;32!UBERON:0002619;9.40e-51;22!UBERON:0002780;7.09e-48;41!UBERON:0001890;7.09e-48;41!UBERON:0000073;1.66e-46;53!UBERON:0002616;1.66e-46;53!UBERON:0001950;3.29e-46;20!UBERON:0000956;4.05e-44;25!UBERON:0000203;4.05e-44;25!UBERON:0001017;1.55e-33;75!UBERON:0000955;1.08e-31;68!UBERON:0001016;7.59e-31;83!UBERON:0000125;2.15e-21;9!UBERON:0002308;2.15e-21;9!UBERON:0002420;3.34e-21;9!UBERON:0007245;3.34e-21;9!UBERON:0010009;3.34e-21;9!UBERON:0010011;3.34e-21;9!UBERON:0000454;3.34e-21;9!UBERON:0004732;4.83e-19;13!UBERON:0004733;1.18e-16;12!UBERON:0002028;1.18e-16;12!UBERON:0009663;1.19e-16;7!UBERON:0002298;1.58e-15;6!UBERON:0000200;3.12e-15;6!UBERON:0002021;8.17e-14;5!UBERON:0001872;1.86e-13;5!UBERON:0001871;2.71e-13;6!UBERON:0000349;4.71e-13;5!UBERON:0011216;9.67e-13;132!UBERON:0007023;1.91e-12;114!UBERON:0002680;1.53e-10;9!UBERON:0001895;1.53e-10;9!UBERON:0000369;3.23e-10;4!UBERON:0002435;3.23e-10;4!UBERON:0000204;3.23e-10;4!UBERON:0000988;6.80e-09;3!UBERON:0002240;1.04e-08;3!UBERON:0005174;1.04e-08;3!UBERON:0001137;1.04e-08;3!UBERON:0001870;2.45e-08;3!UBERON:0001896;2.51e-08;3!UBERON:0005290;2.51e-08;3!UBERON:0005383;7.34e-08;3!UBERON:0005382;7.34e-08;3!UBERON:0010314;3.06e-07;132!UBERON:0005162;8.91e-07;2!UBERON:0000122;8.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.19e-90,56;UBERON:0005068,1.19e-90,56;UBERON:0006241,1.19e-90,56;UBERON:0007135,1.19e-90,56;UBERON:0001016,4.54e-88,89;UBERON:0001017,1.66e-85,81;UBERON:0000073,2.30e-83,53;UBERON:0002616,2.30e-83,53;UBERON:0000955,1.77e-71,68;UBERON:0006238,1.77e-71,68;UBERON:0002780,3.77e-67,41;UBERON:0001890,3.77e-67,41;UBERON:0003080,3.77e-67,41;UBERON:0006240,3.77e-67,41;UBERON:0001893,2.29e-64,34;UBERON:0003528,3.00e-64,34;UBERON:0002020,3.00e-64,34;UBERON:0003075,9.64e-64,82;UBERON:0007284,9.64e-64,82;UBERON:0002346,3.60e-60,86;UBERON:0001869,1.47e-59,32;UBERON:0002791,2.14e-59,32;UBERON:0002619,9.30e-51,22;UBERON:0010371,1.36e-49,104;UBERON:0003056,1.06e-47,61;UBERON:0001950,3.21e-46,20;UBERON:0000956,4.01e-44,25;UBERON:0000203,4.01e-44,25;UBERON:0004121,7.59e-44,171;UBERON:0000924,7.59e-44,171;UBERON:0006601,7.59e-44,171;UBERON:0007023,3.23e-40,114;UBERON:0010314,2.18e-36,132;UBERON:0011216,5.55e-34,223;UBERON:0003076,2.50e-23,15;UBERON:0003057,2.50e-23,15;UBERON:0000125,2.07e-21,9;UBERON:0002308,2.07e-21,9;UBERON:0002420,3.30e-21,9;UBERON:0007245,3.30e-21,9;UBERON:0010009,3.30e-21,9;UBERON:0010011,3.30e-21,9;UBERON:0000454,3.30e-21,9;UBERON:0004732,4.65e-19,13;UBERON:0000025,1.76e-18,192;UBERON:0004733,1.13e-16,12;UBERON:0002028,1.13e-16,12;UBERON:0007277,1.13e-16,12;UBERON:0009663,1.15e-16,7;UBERON:0002298,1.43e-15,6;UBERON:0000200,3.28e-15,6;UBERON:0002021,7.96e-14,5;UBERON:0001872,1.82e-13,5;UBERON:0001871,2.83e-13,6;UBERON:0000349,4.77e-13,5;UBERON:0004111,2.54e-12,240;UBERON:0002680,1.57e-10,9;UBERON:0001895,1.57e-10,9;UBERON:0010092,1.57e-10,9;UBERON:0000369,3.11e-10,4;UBERON:0002435,3.11e-10,4;UBERON:0000204,3.11e-10,4;UBERON:0010082,3.11e-10,4;UBERON:0000483,6.71e-09,306;UBERON:0000988,6.80e-09,3;UBERON:0002240,1.00e-08,3;UBERON:0005174,1.00e-08,3;UBERON:0001137,1.00e-08,3;UBERON:0000119,1.07e-08,309;UBERON:0001896,2.27e-08,3;UBERON:0005290,2.27e-08,3;UBERON:0010096,2.27e-08,3;UBERON:0001870,2.45e-08,3;UBERON:0005383,7.25e-08,3;UBERON:0005382,7.25e-08,3;UBERON:0005162,8.91e-07,2;UBERON:0000122,8.91e-07,2 | |||
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|short_description=p2@NRXN2 | |short_description=p2@NRXN2 | ||
}} | }} |
Latest revision as of 04:04, 19 September 2015
Short description: | p2@NRXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRXN2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000265459, ENST00000345863, ENST00000377559, NM_015080, NM_138732, uc001oar.2, uc001oas.2_5end |
EntrezGene: | NRXN2 |
HGNC: | 8009 |
UniProt: | Q9P2S2F8W812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.06e-07 | 8 |