FFCP PHASE1:Hg19::chr1:81771806..81771876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23266 | |EntrezGene=23266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18582 | |HGNC=18582 | ||
|TSSclassifier=strong | |||
|UniProt=B1ALU1,B1ALU5,B1ALU4,B1ALU3,O95490,B1ALU2 | |UniProt=B1ALU1,B1ALU5,B1ALU4,B1ALU3,O95490,B1ALU2 | ||
|association_with_transcript=0bp_to_ENST00000370721,ENST00000370723,ENST00000370725,ENST00000370727,ENST00000370728,ENST00000370730,ENST00000473719,ENST00000492666,uc001dis.2_5end | |association_with_transcript=0bp_to_ENST00000370721,ENST00000370723,ENST00000370725,ENST00000370727,ENST00000370728,ENST00000370730,ENST00000473719,ENST00000492666,uc001dis.2_5end | ||
|cluster_id=chr1:81771806..81771876,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_LPHN2_5end | |description=CAGE_peak_1_at_LPHN2_5end | ||
|id=chr1:81771806..81771876,+ | |id=chr1:81771806..81771876,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.69e-14;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.50e-68!115;UBERON:0001049!1.33e-42!57;UBERON:0005068!1.33e-42!57;UBERON:0006241!1.33e-42!57;UBERON:0007135!1.33e-42!57;UBERON:0002780!4.08e-37!41;UBERON:0001890!4.08e-37!41;UBERON:0006240!4.08e-37!41;UBERON:0003080!6.92e-36!42;UBERON:0002616!5.10e-35!59;UBERON:0001017!1.23e-34!82;UBERON:0001869!6.89e-34!32;UBERON:0005743!1.51e-33!86;UBERON:0002020!3.95e-33!34;UBERON:0003528!3.95e-33!34;UBERON:0001893!4.00e-33!34;UBERON:0003075!4.23e-33!86;UBERON:0007284!4.23e-33!86;UBERON:0000073!5.25e-32!94;UBERON:0001016!5.25e-32!94;UBERON:0002791!6.49e-32!33;UBERON:0000955!9.01e-32!69;UBERON:0006238!9.01e-32!69;UBERON:0002346!1.08e-30!90;UBERON:0002619!5.73e-29!22;UBERON:0001950!7.99e-27!20;UBERON:0000956!3.16e-26!25;UBERON:0000203!3.16e-26!25;UBERON:0003056!5.90e-25!61;UBERON:0000153!6.85e-21!129;UBERON:0007811!6.85e-21!129;UBERON:0004121!1.58e-20!169;UBERON:0000033!4.57e-20!123;UBERON:0000924!1.70e-19!173;UBERON:0006601!1.70e-19!173;UBERON:0000025!2.95e-15!194;UBERON:0004111!6.04e-15!241;UBERON:0000477!1.34e-13!286;UBERON:0000481!3.63e-11!347;UBERON:0001871!4.42e-11!7;UBERON:0000200!5.31e-09!6;UBERON:0002420!7.83e-09!9;UBERON:0007245!7.83e-09!9;UBERON:0010009!7.83e-09!9;UBERON:0010011!7.83e-09!9;UBERON:0000454!7.83e-09!9;UBERON:0000468!9.44e-09!659;UBERON:0000483!1.80e-08!309;UBERON:0000064!2.27e-08!219;UBERON:0000062!2.31e-08!511;UBERON:0000922!2.32e-08!612;UBERON:0002308!2.39e-08!9;UBERON:0000125!2.39e-08!9;UBERON:0003076!3.47e-08!15;UBERON:0003057!3.47e-08!15;UBERON:0000119!3.62e-08!312;UBERON:0001872!1.04e-07!5;UBERON:0002021!1.52e-07!5;UBERON:0000349!3.30e-07!5;UBERON:0000467!3.90e-07!625;UBERON:0000480!4.63e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!9.50e-68!115;UBERON:0001049!1.33e-42!57;UBERON:0005068!1.33e-42!57;UBERON:0006241!1.33e-42!57;UBERON:0007135!1.33e-42!57;UBERON:0002780!4.08e-37!41;UBERON:0001890!4.08e-37!41;UBERON:0006240!4.08e-37!41;UBERON:0003080!6.92e-36!42;UBERON:0002616!5.10e-35!59;UBERON:0001017!1.23e-34!82;UBERON:0001869!6.89e-34!32;UBERON:0005743!1.51e-33!86;UBERON:0002020!3.95e-33!34;UBERON:0003528!3.95e-33!34;UBERON:0001893!4.00e-33!34;UBERON:0003075!4.23e-33!86;UBERON:0007284!4.23e-33!86;UBERON:0000073!5.25e-32!94;UBERON:0001016!5.25e-32!94;UBERON:0002791!6.49e-32!33;UBERON:0000955!9.01e-32!69;UBERON:0006238!9.01e-32!69;UBERON:0002346!1.08e-30!90;UBERON:0002619!5.73e-29!22;UBERON:0001950!7.99e-27!20;UBERON:0000956!3.16e-26!25;UBERON:0000203!3.16e-26!25;UBERON:0003056!5.90e-25!61;UBERON:0000153!6.85e-21!129;UBERON:0007811!6.85e-21!129;UBERON:0004121!1.58e-20!169;UBERON:0000033!4.57e-20!123;UBERON:0000924!1.70e-19!173;UBERON:0006601!1.70e-19!173;UBERON:0000025!2.95e-15!194;UBERON:0004111!6.04e-15!241;UBERON:0000477!1.34e-13!286;UBERON:0000481!3.63e-11!347;UBERON:0001871!4.42e-11!7;UBERON:0000200!5.31e-09!6;UBERON:0002420!7.83e-09!9;UBERON:0007245!7.83e-09!9;UBERON:0010009!7.83e-09!9;UBERON:0010011!7.83e-09!9;UBERON:0000454!7.83e-09!9;UBERON:0000468!9.44e-09!659;UBERON:0000483!1.80e-08!309;UBERON:0000064!2.27e-08!219;UBERON:0000062!2.31e-08!511;UBERON:0000922!2.32e-08!612;UBERON:0002308!2.39e-08!9;UBERON:0000125!2.39e-08!9;UBERON:0003076!3.47e-08!15;UBERON:0003057!3.47e-08!15;UBERON:0000119!3.62e-08!312;UBERON:0001872!1.04e-07!5;UBERON:0002021!1.52e-07!5;UBERON:0000349!3.30e-07!5;UBERON:0000467!3.90e-07!625;UBERON:0000480!4.63e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.19e-49;22!UBERON:0001869;4.75e-47;32!UBERON:0003528;3.35e-45;34!UBERON:0002020;3.35e-45;34!UBERON:0001950;3.78e-45;20!UBERON:0002791;6.04e-44;32!UBERON:0000956;2.48e-42;25!UBERON:0000203;2.48e-42;25!UBERON:0001893;7.30e-42;34!UBERON:0002780;3.13e-38;41!UBERON:0001890;3.13e-38;41!UBERON:0000073;8.08e-29;53!UBERON:0002616;8.08e-29;53!UBERON:0000955;8.90e-22;68!UBERON:0001017;2.65e-21;75!UBERON:0001016;2.39e-16;83!UBERON:0001871;8.17e-16;6!UBERON:0007023;6.71e-15;114!UBERON:0000200;2.29e-14;6!UBERON:0000922;3.63e-12;49!UBERON:0001872;3.75e-12;5!UBERON:0002021;7.09e-12;5!UBERON:0002420;1.15e-11;9!UBERON:0007245;1.15e-11;9!UBERON:0010009;1.15e-11;9!UBERON:0010011;1.15e-11;9!UBERON:0000454;1.15e-11;9!UBERON:0000349;2.71e-11;5!UBERON:0000125;5.42e-11;9!UBERON:0002308;5.42e-11;9!UBERON:0011216;7.69e-10;132!UBERON:0000369;1.31e-09;4!UBERON:0002435;1.31e-09;4!UBERON:0000204;1.31e-09;4!UBERON:0001870;4.80e-08;3!UBERON:0009663;5.35e-08;7!UBERON:0002298;1.15e-07;6!UBERON:0005383;1.33e-07;3!UBERON:0005382;1.33e-07;3!UBERON:0002108;5.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.00e-56,56;UBERON:0005068,1.00e-56,56;UBERON:0006241,1.00e-56,56;UBERON:0007135,1.00e-56,56;UBERON:0007023,1.45e-56,114;UBERON:0000073,1.63e-54,53;UBERON:0002616,1.63e-54,53;UBERON:0002780,1.39e-53,41;UBERON:0001890,1.39e-53,41;UBERON:0003080,1.39e-53,41;UBERON:0006240,1.39e-53,41;UBERON:0001869,1.92e-52,32;UBERON:0003528,1.04e-51,34;UBERON:0002020,1.04e-51,34;UBERON:0001893,6.98e-49,34;UBERON:0002619,7.02e-49,22;UBERON:0002791,1.53e-48,32;UBERON:0000955,1.95e-46,68;UBERON:0006238,1.95e-46,68;UBERON:0001017,2.32e-45,81;UBERON:0001950,3.65e-45,20;UBERON:0000956,2.43e-42,25;UBERON:0000203,2.43e-42,25;UBERON:0001016,2.80e-41,89;UBERON:0003075,1.19e-40,82;UBERON:0007284,1.19e-40,82;UBERON:0002346,3.83e-38,86;UBERON:0003056,8.58e-35,61;UBERON:0010371,7.42e-31,104;UBERON:0011216,5.20e-30,223;UBERON:0010314,1.58e-29,132;UBERON:0004121,4.50e-22,171;UBERON:0000924,4.50e-22,171;UBERON:0006601,4.50e-22,171;UBERON:0000025,2.01e-20,192;UBERON:0004111,2.13e-16,240;UBERON:0001871,7.76e-16,6;UBERON:0000200,2.30e-14,6;UBERON:0001872,3.76e-12,5;UBERON:0002021,7.26e-12,5;UBERON:0002420,1.11e-11,9;UBERON:0007245,1.11e-11,9;UBERON:0010009,1.11e-11,9;UBERON:0010011,1.11e-11,9;UBERON:0000454,1.11e-11,9;UBERON:0000483,1.99e-11,306;UBERON:0000349,2.75e-11,5;UBERON:0000119,3.67e-11,309;UBERON:0000125,6.24e-11,9;UBERON:0002308,6.24e-11,9;UBERON:0000369,1.33e-09,4;UBERON:0002435,1.33e-09,4;UBERON:0000204,1.33e-09,4;UBERON:0010082,1.33e-09,4;UBERON:0001870,4.70e-08,3;UBERON:0009663,5.31e-08,7;UBERON:0005383,1.30e-07,3;UBERON:0005382,1.30e-07,3;UBERON:0002298,1.52e-07,6;UBERON:0000922,3.53e-07,592;UBERON:0002050,4.20e-07,564;UBERON:0002108,5.36e-07,4;UBERON:0000923,7.87e-07,560;UBERON:0010316,7.87e-07,560;UBERON:0005291,7.87e-07,560;UBERON:0006598,7.87e-07,560;UBERON:0010317,7.87e-07,560;UBERON:0002532,7.87e-07,560;UBERON:0003076,8.28e-07,15;UBERON:0003057,8.28e-07,15;UBERON:0005423,9.98e-07,581 | |||
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| ||
|short_description=p1@LPHN2 | |short_description=p1@LPHN2 | ||
}} | }} |
Latest revision as of 09:46, 19 September 2015
Short description: | p1@LPHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPHN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000370721, ENST00000370723, ENST00000370725, ENST00000370727, ENST00000370728, ENST00000370730, ENST00000473719, ENST00000492666, uc001dis.2_5end |
EntrezGene: | LPHN2 |
HGNC: | 18582 |
UniProt: | B1ALU1B1ALU5B1ALU4B1ALU3O95490B1ALU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data