FFCP PHASE1:Hg19::chr22:29884834..29884866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4744 | |EntrezGene=4744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7737 | |HGNC=7737 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-398bp_to_uc003afp.2_5end | |association_with_transcript=-398bp_to_uc003afp.2_5end | ||
|cluster_id=chr22:29884834..29884866,+ | |||
|coexpression_cluster_id=C261 | |coexpression_cluster_id=C261 | ||
|description=CAGE_peak_2_at_NEFH_5end | |description=CAGE_peak_2_at_NEFH_5end | ||
|id=chr22:29884834..29884866,+ | |id=chr22:29884834..29884866,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.75e-21;2!CL:0000242;5.75e-21;2!CL:0000312;5.95e-09;5!CL:0000240;1.34e-07;6!CL:0000311;1.34e-07;6!CL:0000079;1.34e-07;6!CL:0000237;1.34e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.20e-21,2;CL:0000312,5.72e-09,5;CL:0000240,1.29e-07,6;CL:0000311,1.29e-07,6;CL:0000079,1.29e-07,6;CL:0000237,1.29e-07,6;CL:0000036,1.29e-07,6;CL:0000357,1.29e-07,6;CL:0000114,1.29e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.12e-14;3!UBERON:0003057;2.12e-14;3!UBERON:0006601;2.65e-14;82!UBERON:0006222;1.69e-11;1!CL:0000357;1.34e-07;6!CL:0000114;1.34e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;8.46e-59;6!UBERON:0000988;7.00e-31;3!UBERON:0001896;9.56e-30;3!UBERON:0005290;9.56e-30;3!UBERON:0004733;2.65e-29;12!UBERON:0002028;2.65e-29;12!UBERON:0004732;4.97e-27;13!UBERON:0000073;6.62e-22;53!UBERON:0002616;6.62e-22;53!UBERON:0002702;2.30e-21;2!UBERON:0002148;2.42e-21;2!UBERON:0006331;2.42e-21;2!UBERON:0009662;2.42e-21;2!UBERON:0001905;2.83e-21;2!UBERON:0002757;2.83e-21;2!UBERON:0010134;2.83e-21;2!UBERON:0005408;2.83e-21;2!UBERON:0001899;2.83e-21;2!UBERON:0001017;1.34e-17;75!UBERON:0001950;1.16e-16;20!UBERON:0000200;1.15e-15;6!UBERON:0002619;3.49e-15;22!UBERON:0000955;5.65e-15;68!UBERON:0001870;1.41e-14;3!UBERON:0002240;2.12e-14;3!UBERON:0005174;2.12e-14;3!UBERON:0001137;2.12e-14;3!UBERON:0003528;4.19e-14;34!UBERON:0002020;4.19e-14;34!UBERON:0001894;1.21e-13;7!UBERON:0000956;2.18e-13;25!UBERON:0000203;2.18e-13;25!UBERON:0002780;2.31e-11;41!UBERON:0001890;2.31e-11;41!UBERON:0003296;4.02e-11;4!UBERON:0010133;4.02e-11;4!UBERON:0002784;4.02e-11;4!UBERON:0002680;1.05e-10;9!UBERON:0001895;1.05e-10;9!UBERON:0001016;1.74e-10;83!UBERON:0002791;3.22e-10;32!UBERON:0001869;3.22e-10;32!UBERON:0001893;1.56e-09;34!UBERON:0002021;9.57e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.40e-58,6;UBERON:0001049,7.03e-48,56;UBERON:0005068,7.03e-48,56;UBERON:0006241,7.03e-48,56;UBERON:0007135,7.03e-48,56;UBERON:0003076,2.67e-41,15;UBERON:0003057,2.67e-41,15;UBERON:0000073,4.79e-39,53;UBERON:0002616,4.79e-39,53;UBERON:0001017,2.55e-36,81;UBERON:0000955,5.88e-34,68;UBERON:0006238,5.88e-34,68;UBERON:0001016,1.57e-32,89;UBERON:0003075,3.73e-32,82;UBERON:0007284,3.73e-32,82;UBERON:0010371,1.23e-31,104;UBERON:0000988,6.02e-31,3;UBERON:0002346,1.44e-30,86;UBERON:0001896,1.83e-29,3;UBERON:0005290,1.83e-29,3;UBERON:0010096,1.83e-29,3;UBERON:0004733,3.39e-29,12;UBERON:0002028,3.39e-29,12;UBERON:0007277,3.39e-29,12;UBERON:0004732,6.25e-27,13;UBERON:0002148,2.31e-21,2;UBERON:0006331,2.31e-21,2;UBERON:0009662,2.31e-21,2;UBERON:0002702,2.55e-21,2;UBERON:0001905,3.13e-21,2;UBERON:0002757,3.13e-21,2;UBERON:0010134,3.13e-21,2;UBERON:0005408,3.13e-21,2;UBERON:0001899,3.13e-21,2;UBERON:0004121,2.53e-20,171;UBERON:0000924,2.53e-20,171;UBERON:0006601,2.53e-20,171;UBERON:0010314,3.73e-19,132;UBERON:0002780,4.41e-18,41;UBERON:0001890,4.41e-18,41;UBERON:0003080,4.41e-18,41;UBERON:0006240,4.41e-18,41;UBERON:0003528,2.40e-17,34;UBERON:0002020,2.40e-17,34;UBERON:0007023,2.60e-17,114;UBERON:0001950,1.12e-16,20;UBERON:0000200,1.06e-15,6;UBERON:0002619,3.40e-15,22;UBERON:0001870,1.51e-14,3;UBERON:0002240,1.73e-14,3;UBERON:0005174,1.73e-14,3;UBERON:0001137,1.73e-14,3;UBERON:0001894,1.29e-13,7;UBERON:0006222,1.29e-13,7;UBERON:0000956,2.13e-13,25;UBERON:0000203,2.13e-13,25;UBERON:0000025,2.07e-12,192;UBERON:0003056,7.17e-12,61;UBERON:0011216,1.19e-11,223;UBERON:0003296,4.23e-11,4;UBERON:0010133,4.23e-11,4;UBERON:0002784,4.23e-11,4;UBERON:0002680,9.96e-11,9;UBERON:0001895,9.96e-11,9;UBERON:0010092,9.96e-11,9;UBERON:0002791,1.80e-10,32;UBERON:0001869,1.80e-10,32;UBERON:0001893,7.53e-10,34;UBERON:0004111,2.05e-09,240;UBERON:0000483,4.64e-09,306;UBERON:0000119,6.05e-09,309;UBERON:0002021,9.95e-09,5 | |||
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|short_description=p2@NEFH | |short_description=p2@NEFH | ||
}} | }} |
Latest revision as of 15:47, 19 September 2015
Short description: | p2@NEFH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEFH_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | -398bp_to_uc003afp.2_5end |
EntrezGene: | NEFH |
HGNC: | 7737 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.20e-21 | 2 |
keratinocyte | 5.72e-09 | 5 |
stratified squamous epithelial cell | 1.29e-07 | 6 |
keratin accumulating cell | 1.29e-07 | 6 |
stratified epithelial cell | 1.29e-07 | 6 |
keratinizing barrier epithelial cell | 1.29e-07 | 6 |
epithelial fate stem cell | 1.29e-07 | 6 |
stratified epithelial stem cell | 1.29e-07 | 6 |
surface ectodermal cell | 1.29e-07 | 6 |