FFCP PHASE1:Hg19::chr19:1885483..1885507,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:1885483..1885507,-
|short_description=p1@FAM108A1
|description=CAGE_peak_1_at_FAM108A1_5end
|association_with_transcript=0bp_to_ENST00000292577_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81926 | |EntrezGene=81926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28756 | |HGNC=28756 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GS6 | |UniProt=Q96GS6 | ||
|association_with_transcript=0bp_to_ENST00000292577_5end | |||
|cluster_id=chr19:1885483..1885507,- | |||
|coexpression_cluster_id=C1060 | |||
|description=CAGE_peak_1_at_FAM108A1_5end | |||
|id=chr19:1885483..1885507,- | |||
|ontology_enrichment_celltype=CL:0000055!2.13e-14!180;CL:0000183!3.27e-11!59;CL:0000680!2.05e-09!57;CL:0000056!2.05e-09!57;CL:0000355!2.05e-09!57;CL:0000222!2.60e-09!119;CL:0000187!2.91e-09!54;CL:0000393!9.86e-09!60;CL:0000211!9.86e-09!60;CL:0000192!5.31e-08!42;CL:0000514!5.31e-08!42;CL:0000359!7.07e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.86e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.29e-09,121;CL:0000680,4.39e-09,58;CL:0000056,4.39e-09,58;CL:0000355,4.39e-09,58;CL:0000187,6.34e-09,55;CL:0000393,1.97e-08,61;CL:0000211,1.97e-08,61;CL:0000192,1.20e-07,43;CL:0000514,1.20e-07,43;CL:0000349,2.38e-07,19;CL:0000359,7.07e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.42e-16!365;UBERON:0000119!4.95e-15!312;UBERON:0000483!9.43e-15!309;UBERON:0004121!1.89e-11!169;UBERON:0000924!2.45e-11!173;UBERON:0006601!2.45e-11!173;UBERON:0003075!2.89e-11!86;UBERON:0007284!2.89e-11!86;UBERON:0004290!3.29e-11!70;UBERON:0000914!3.53e-11!83;UBERON:0002329!3.53e-11!83;UBERON:0003077!3.53e-11!83;UBERON:0003059!3.53e-11!83;UBERON:0007282!3.53e-11!83;UBERON:0009618!3.53e-11!83;UBERON:0007285!3.53e-11!83;UBERON:0002346!5.81e-11!90;UBERON:0000025!1.32e-10!194;UBERON:0000064!1.92e-10!219;UBERON:0001893!5.21e-10!34;UBERON:0000486!5.41e-10!82;UBERON:0003056!7.00e-10!61;UBERON:0000481!8.41e-10!347;UBERON:0001869!8.54e-10!32;UBERON:0000033!1.16e-09!123;UBERON:0004111!1.22e-09!241;UBERON:0002791!1.51e-09!33;UBERON:0000153!1.53e-09!129;UBERON:0007811!1.53e-09!129;UBERON:0002020!2.16e-09!34;UBERON:0003528!2.16e-09!34;UBERON:0002616!2.24e-09!59;UBERON:0000477!2.63e-09!286;UBERON:0005256!3.48e-09!143;UBERON:0001134!5.03e-09!61;UBERON:0002036!5.03e-09!61;UBERON:0003082!5.03e-09!61;UBERON:0000955!7.56e-09!69;UBERON:0006238!7.56e-09!69;UBERON:0002385!8.83e-09!63;UBERON:0001015!8.83e-09!63;UBERON:0000383!8.83e-09!63;UBERON:0001049!9.24e-09!57;UBERON:0005068!9.24e-09!57;UBERON:0006241!9.24e-09!57;UBERON:0007135!9.24e-09!57;UBERON:0000468!1.56e-08!659;UBERON:0002049!3.41e-08!79;UBERON:0007798!3.41e-08!79;UBERON:0007023!4.70e-08!115;UBERON:0003080!5.33e-08!42;UBERON:0001017!5.37e-08!82;UBERON:0005743!5.64e-08!86;UBERON:0002780!7.95e-08!41;UBERON:0001890!7.95e-08!41;UBERON:0006240!7.95e-08!41;UBERON:0004872!1.23e-07!84;UBERON:0000073!2.37e-07!94;UBERON:0001016!2.37e-07!94;UBERON:0005631!2.66e-07!14;UBERON:0000158!2.66e-07!14;UBERON:0000956!2.96e-07!25;UBERON:0000203!2.96e-07!25;UBERON:0002619!4.09e-07!22;UBERON:0001981!4.64e-07!60;UBERON:0007500!4.64e-07!60;UBERON:0004537!4.64e-07!60;UBERON:0006965!4.64e-07!60;UBERON:0001009!7.10e-07!113;UBERON:0000467!7.21e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.36e-09;34!UBERON:0001869;5.32e-09;32!UBERON:0002791;1.24e-08;32!UBERON:0003528;1.56e-08;34!UBERON:0002020;1.56e-08;34!UBERON:0000956;3.04e-07;25!UBERON:0000203;3.04e-07;25!UBERON:0002619;4.76e-07;22 | |||
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| ||
|short_description=p1@FAM108A1 | |||
}} | }} |
Latest revision as of 17:41, 16 September 2015
Short description: | p1@FAM108A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM108A1_5end |
Coexpression cluster: | C1060_Mesenchymal_Pericytes_Fibroblast_occipital_Renal_temporal_Nucleus |
Association with transcript: | 0bp_to_ENST00000292577_5end |
EntrezGene: | FAM108A1 |
HGNC: | 28756 |
UniProt: | Q96GS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.29e-09 | 121 |
muscle precursor cell | 4.39e-09 | 58 |
myoblast | 4.39e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.39e-09 | 58 |
muscle cell | 6.34e-09 | 55 |
electrically responsive cell | 1.97e-08 | 61 |
electrically active cell | 1.97e-08 | 61 |
smooth muscle cell | 1.20e-07 | 43 |
smooth muscle myoblast | 1.20e-07 | 43 |
extraembryonic cell | 2.38e-07 | 19 |
vascular associated smooth muscle cell | 7.07e-07 | 32 |