FFCP PHASE1:Hg19::chr17:42984454..42984463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=241bp_to_BC012228_5end | |association_with_transcript=241bp_to_BC012228_5end | ||
|cluster_id=chr17:42984454..42984463,- | |||
|coexpression_cluster_id=C1620 | |coexpression_cluster_id=C1620 | ||
|description=CAGE_peak_37_at_GFAP_5end | |description=CAGE_peak_37_at_GFAP_5end | ||
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|ontology_enrichment_celltype=CL:0002605!5.45e-13!3;CL:0000128!1.20e-09!7;CL:0000126!1.20e-09!7;CL:0000127!1.20e-09!7;CL:0002453!1.20e-09!7 | |ontology_enrichment_celltype=CL:0002605!5.45e-13!3;CL:0000128!1.20e-09!7;CL:0000126!1.20e-09!7;CL:0000127!1.20e-09!7;CL:0002453!1.20e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.28e-25;3!CL:0000128;3.11e-19;7!CL:0000126;3.11e-19;7!CL:0000127;3.11e-19;7!CL:0000243;4.96e-08;15!CL:0000125;4.96e-08;15!CL:0000095;3.37e-07;17 | |ontology_enrichment_celltype_v019=CL:0002605;1.28e-25;3!CL:0000128;3.11e-19;7!CL:0000126;3.11e-19;7!CL:0000127;3.11e-19;7!CL:0000243;4.96e-08;15!CL:0000125;4.96e-08;15!CL:0000095;3.37e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.09e-25,3;CL:0000128,3.77e-19,7;CL:0000126,3.77e-19,7;CL:0000127,3.77e-19,7;CL:0002453,3.77e-19,7;CL:0000243,5.35e-08,15;CL:0000125,5.35e-08,15;CL:0000030,5.35e-08,15;CL:0000339,5.35e-08,15;CL:0000095,3.61e-07,17;CL:0000123,3.61e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.44e-26;3!UBERON:0003057;3.44e-26;3!UBERON:0006222;5.53e-10;1!CL:0000339;4.96e-08;15 | |ontology_enrichment_development_v019=UBERON:0006241;3.44e-26;3!UBERON:0003057;3.44e-26;3!UBERON:0006222;5.53e-10;1!CL:0000339;4.96e-08;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.51e-122!57;UBERON:0005068!1.51e-122!57;UBERON:0006241!1.51e-122!57;UBERON:0007135!1.51e-122!57;UBERON:0002616!6.39e-101!59;UBERON:0001017!1.02e-98!82;UBERON:0005743!8.63e-94!86;UBERON:0000955!1.65e-88!69;UBERON:0006238!1.65e-88!69;UBERON:0002780!5.24e-87!41;UBERON:0001890!5.24e-87!41;UBERON:0006240!5.24e-87!41;UBERON:0003080!8.39e-85!42;UBERON:0000073!3.45e-84!94;UBERON:0001016!3.45e-84!94;UBERON:0003075!1.87e-82!86;UBERON:0007284!1.87e-82!86;UBERON:0002020!5.61e-80!34;UBERON:0003528!5.61e-80!34;UBERON:0001893!1.43e-79!34;UBERON:0002346!2.07e-78!90;UBERON:0002791!3.11e-76!33;UBERON:0001869!2.51e-72!32;UBERON:0003056!2.01e-56!61;UBERON:0000956!1.14e-54!25;UBERON:0000203!1.14e-54!25;UBERON:0000033!5.71e-49!123;UBERON:0007023!1.95e-48!115;UBERON:0000153!2.71e-46!129;UBERON:0007811!2.71e-46!129;UBERON:0002619!4.28e-44!22;UBERON:0004121!3.31e-43!169;UBERON:0000924!5.32e-42!173;UBERON:0006601!5.32e-42!173;UBERON:0001950!3.59e-37!20;UBERON:0003076!6.70e-37!15;UBERON:0003057!6.70e-37!15;UBERON:0000025!9.48e-30!194;UBERON:0002308!1.81e-26!9;UBERON:0000125!1.81e-26!9;UBERON:0002420!2.38e-26!9;UBERON:0007245!2.38e-26!9;UBERON:0010009!2.38e-26!9;UBERON:0010011!2.38e-26!9;UBERON:0000454!2.38e-26!9;UBERON:0004733!8.09e-26!12;UBERON:0002028!8.09e-26!12;UBERON:0007277!8.09e-26!12;UBERON:0002298!3.33e-24!8;UBERON:0004732!1.06e-23!13;UBERON:0004111!4.25e-22!241;UBERON:0000349!9.38e-20!5;UBERON:0009663!3.07e-19!7;UBERON:0000477!2.57e-18!286;UBERON:0001871!1.16e-16!7;UBERON:0000483!3.71e-16!309;UBERON:0000119!6.58e-16!312;UBERON:0002680!1.59e-15!9;UBERON:0001895!1.59e-15!9;UBERON:0010092!1.59e-15!9;UBERON:0000200!2.00e-15!6;UBERON:0000369!4.88e-15!4;UBERON:0002435!4.88e-15!4;UBERON:0000204!4.88e-15!4;UBERON:0010082!4.88e-15!4;UBERON:0000064!1.38e-14!219;UBERON:0000475!5.07e-14!365;UBERON:0002240!1.61e-13!3;UBERON:0001896!3.94e-13!3;UBERON:0005290!3.94e-13!3;UBERON:0010096!3.94e-13!3;UBERON:0006331!6.14e-13!3;UBERON:0002021!6.60e-13!5;UBERON:0000988!1.21e-12!3;UBERON:0002771!6.20e-12!3;UBERON:0005383!7.51e-12!3;UBERON:0005382!7.51e-12!3;UBERON:0001894!1.87e-09!7;UBERON:0006222!1.87e-09!7;UBERON:0001954!2.62e-09!2;UBERON:0003022!2.62e-09!2;UBERON:0002421!2.62e-09!2;UBERON:0002600!2.62e-09!2;UBERON:0002148!3.92e-09!2;UBERON:0009662!3.92e-09!2;UBERON:0001897!4.99e-09!2;UBERON:0001876!5.40e-09!2;UBERON:0001873!1.97e-08!2;UBERON:0010122!1.97e-08!2;UBERON:0005174!2.88e-08!5;UBERON:0001137!2.88e-08!5;UBERON:0000062!1.01e-07!511;UBERON:0000481!1.44e-07!347;UBERON:0001872!3.26e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.51e-122!57;UBERON:0005068!1.51e-122!57;UBERON:0006241!1.51e-122!57;UBERON:0007135!1.51e-122!57;UBERON:0002616!6.39e-101!59;UBERON:0001017!1.02e-98!82;UBERON:0005743!8.63e-94!86;UBERON:0000955!1.65e-88!69;UBERON:0006238!1.65e-88!69;UBERON:0002780!5.24e-87!41;UBERON:0001890!5.24e-87!41;UBERON:0006240!5.24e-87!41;UBERON:0003080!8.39e-85!42;UBERON:0000073!3.45e-84!94;UBERON:0001016!3.45e-84!94;UBERON:0003075!1.87e-82!86;UBERON:0007284!1.87e-82!86;UBERON:0002020!5.61e-80!34;UBERON:0003528!5.61e-80!34;UBERON:0001893!1.43e-79!34;UBERON:0002346!2.07e-78!90;UBERON:0002791!3.11e-76!33;UBERON:0001869!2.51e-72!32;UBERON:0003056!2.01e-56!61;UBERON:0000956!1.14e-54!25;UBERON:0000203!1.14e-54!25;UBERON:0000033!5.71e-49!123;UBERON:0007023!1.95e-48!115;UBERON:0000153!2.71e-46!129;UBERON:0007811!2.71e-46!129;UBERON:0002619!4.28e-44!22;UBERON:0004121!3.31e-43!169;UBERON:0000924!5.32e-42!173;UBERON:0006601!5.32e-42!173;UBERON:0001950!3.59e-37!20;UBERON:0003076!6.70e-37!15;UBERON:0003057!6.70e-37!15;UBERON:0000025!9.48e-30!194;UBERON:0002308!1.81e-26!9;UBERON:0000125!1.81e-26!9;UBERON:0002420!2.38e-26!9;UBERON:0007245!2.38e-26!9;UBERON:0010009!2.38e-26!9;UBERON:0010011!2.38e-26!9;UBERON:0000454!2.38e-26!9;UBERON:0004733!8.09e-26!12;UBERON:0002028!8.09e-26!12;UBERON:0007277!8.09e-26!12;UBERON:0002298!3.33e-24!8;UBERON:0004732!1.06e-23!13;UBERON:0004111!4.25e-22!241;UBERON:0000349!9.38e-20!5;UBERON:0009663!3.07e-19!7;UBERON:0000477!2.57e-18!286;UBERON:0001871!1.16e-16!7;UBERON:0000483!3.71e-16!309;UBERON:0000119!6.58e-16!312;UBERON:0002680!1.59e-15!9;UBERON:0001895!1.59e-15!9;UBERON:0010092!1.59e-15!9;UBERON:0000200!2.00e-15!6;UBERON:0000369!4.88e-15!4;UBERON:0002435!4.88e-15!4;UBERON:0000204!4.88e-15!4;UBERON:0010082!4.88e-15!4;UBERON:0000064!1.38e-14!219;UBERON:0000475!5.07e-14!365;UBERON:0002240!1.61e-13!3;UBERON:0001896!3.94e-13!3;UBERON:0005290!3.94e-13!3;UBERON:0010096!3.94e-13!3;UBERON:0006331!6.14e-13!3;UBERON:0002021!6.60e-13!5;UBERON:0000988!1.21e-12!3;UBERON:0002771!6.20e-12!3;UBERON:0005383!7.51e-12!3;UBERON:0005382!7.51e-12!3;UBERON:0001894!1.87e-09!7;UBERON:0006222!1.87e-09!7;UBERON:0001954!2.62e-09!2;UBERON:0003022!2.62e-09!2;UBERON:0002421!2.62e-09!2;UBERON:0002600!2.62e-09!2;UBERON:0002148!3.92e-09!2;UBERON:0009662!3.92e-09!2;UBERON:0001897!4.99e-09!2;UBERON:0001876!5.40e-09!2;UBERON:0001873!1.97e-08!2;UBERON:0010122!1.97e-08!2;UBERON:0005174!2.88e-08!5;UBERON:0001137!2.88e-08!5;UBERON:0000062!1.01e-07!511;UBERON:0000481!1.44e-07!347;UBERON:0001872!3.26e-07!5 | ||
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|short_description=p37@GFAP | |short_description=p37@GFAP | ||
}} | }} |
Latest revision as of 23:22, 24 September 2015
Short description: | p37@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_GFAP_5end |
Coexpression cluster: | C1620_spinal_occipital_optic_diencephalon_substantia_brain_corpus |
Association with transcript: | 241bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.09e-25 | 3 |
oligodendrocyte | 3.77e-19 | 7 |
macroglial cell | 3.77e-19 | 7 |
astrocyte | 3.77e-19 | 7 |
oligodendrocyte precursor cell | 3.77e-19 | 7 |
glial cell (sensu Vertebrata) | 5.35e-08 | 15 |
glial cell | 5.35e-08 | 15 |
glioblast | 5.35e-08 | 15 |
glioblast (sensu Vertebrata) | 5.35e-08 | 15 |
neuron associated cell | 3.61e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.61e-07 | 17 |