FFCP PHASE1:Hg19::chr5:114515949..114516006,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:114515949..114516006,-
|short_description=p2@TRIM36
|description=CAGE_peak_2_at_TRIM36_5end
|association_with_transcript=-93bp_to_ENST00000282369_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55521 | |EntrezGene=55521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16280 | |HGNC=16280 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ86 | |UniProt=Q9NQ86 | ||
|association_with_transcript=-93bp_to_ENST00000282369_5end | |||
|cluster_id=chr5:114515949..114516006,- | |||
|coexpression_cluster_id=C596 | |||
|description=CAGE_peak_2_at_TRIM36_5end | |||
|id=chr5:114515949..114516006,- | |||
|ontology_enrichment_celltype=CL:0000047!1.29e-07!8;CL:0002319!1.92e-07!25;CL:0000133!7.39e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.26e-09;25!CL:0000128;9.45e-08;7!CL:0000126;9.45e-08;7!CL:0000127;9.45e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.27e-09,25;CL:0000047,1.62e-09,8;CL:0000128,8.16e-08,7;CL:0000126,8.16e-08,7;CL:0000127,8.16e-08,7;CL:0002453,8.16e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.71e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@TRIM36 | |||
}} | }} |
Latest revision as of 19:28, 19 September 2015
Short description: | p2@TRIM36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM36_5end |
Coexpression cluster: | C596_testis_medulla_pituitary_caudate_amygdala_hippocampus_putamen |
Association with transcript: | -93bp_to_ENST00000282369_5end |
EntrezGene: | TRIM36 |
HGNC: | 16280 |
UniProt: | Q9NQ86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.27e-09 | 25 |
neuronal stem cell | 1.62e-09 | 8 |
oligodendrocyte | 8.16e-08 | 7 |
macroglial cell | 8.16e-08 | 7 |
astrocyte | 8.16e-08 | 7 |
oligodendrocyte precursor cell | 8.16e-08 | 7 |