FFCP PHASE1:Hg19::chr6:99282461..99282472,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:99282461..99282472,+
|short_description=p7@POU3F2
|description=CAGE_peak_7_at_POU3F2_5end
|association_with_transcript=-107bp_to_ENST00000328345,NM_005604,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5454 | |EntrezGene=5454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9215 | |HGNC=9215 | ||
|TSSclassifier=strong | |||
|UniProt=P20265,B3KTH8 | |UniProt=P20265,B3KTH8 | ||
|association_with_transcript=-107bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | |||
|cluster_id=chr6:99282461..99282472,+ | |||
|coexpression_cluster_id=C2872 | |||
|description=CAGE_peak_7_at_POU3F2_5end | |||
|id=chr6:99282461..99282472,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.75e-13!25;CL:0000128!4.51e-13!7;CL:0000126!4.51e-13!7;CL:0000127!4.51e-13!7;CL:0002453!4.51e-13!7;CL:0000133!3.32e-10!59;CL:0002605!3.92e-09!3;CL:0000047!2.81e-08!8;CL:0000333!3.55e-08!41;CL:0000221!9.29e-08!71;CL:0000095!1.85e-07!17;CL:0000123!1.85e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.49e-20;3!CL:0002319;3.06e-18;25!CL:0000128;3.08e-15;7!CL:0000126;3.08e-15;7!CL:0000127;3.08e-15;7!CL:0000540;1.02e-10;6!CL:0000404;1.02e-10;6!CL:0000095;2.09e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.54e-20,3;CL:0002319,2.88e-18,25;CL:0000128,2.18e-15,7;CL:0000126,2.18e-15,7;CL:0000127,2.18e-15,7;CL:0002453,2.18e-15,7;CL:0000047,1.98e-13,8;CL:0000133,4.23e-11,59;CL:0000540,1.11e-10,6;CL:0000031,1.11e-10,6;CL:0000404,1.11e-10,6;CL:0000221,8.43e-09,72;CL:0000095,1.81e-08,17;CL:0000123,1.81e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000031;1.02e-10;6!UBERON:0006241;1.18e-09;3!UBERON:0003057;1.18e-09;3!UBERON:0005425;1.14e-07;1!CL:0000133;2.56e-07;59 | |||
|ontology_enrichment_disease=DOID:171!1.42e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.14e-07;1!DOID:1357;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.11e-07,1;DOID:1357,1.11e-07,1 | |||
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| ||
|short_description=p7@POU3F2 | |||
}} | }} |
Latest revision as of 05:56, 20 September 2015
Short description: | p7@POU3F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_POU3F2_5end |
Coexpression cluster: | C2872_neuroepithelioma_neuroblastoma_Astrocyte_Neurons_carcinoid_astrocytoma_Neural |
Association with transcript: | -107bp_to_ENST00000328345, NM_005604, uc003ppe.2_5end |
EntrezGene: | POU3F2 |
HGNC: | 9215 |
UniProt: | P20265B3KTH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.54e-20 | 3 |
neural cell | 2.88e-18 | 25 |
oligodendrocyte | 2.18e-15 | 7 |
macroglial cell | 2.18e-15 | 7 |
astrocyte | 2.18e-15 | 7 |
oligodendrocyte precursor cell | 2.18e-15 | 7 |
neuronal stem cell | 1.98e-13 | 8 |
neurectodermal cell | 4.23e-11 | 59 |
neuron | 1.11e-10 | 6 |
neuroblast | 1.11e-10 | 6 |
electrically signaling cell | 1.11e-10 | 6 |
ectodermal cell | 8.43e-09 | 72 |
neuron associated cell | 1.81e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.81e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.11e-07 | 1 |
maxillary sinus cancer | 1.11e-07 | 1 |