FFCP PHASE1:Hg19::chr7:105516839..105516841,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:105516839..105516841,+
|short_description=p10@CDHR3
|description=CAGE_peak_10_at_CDHR3_5end
|association_with_transcript=-400bp_to_ENST00000487084_5end
|E...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222256 | |EntrezGene=222256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26308 | |HGNC=26308 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-400bp_to_ENST00000487084_5end | |||
|cluster_id=chr7:105516839..105516841,+ | |||
|coexpression_cluster_id=C256 | |||
|description=CAGE_peak_10_at_CDHR3_5end | |||
|id=chr7:105516839..105516841,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.64e-13;1!UBERON:0006601;2.17e-12;82!UBERON:0010122;2.35e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.62e-33!57;UBERON:0005068!5.62e-33!57;UBERON:0006241!5.62e-33!57;UBERON:0007135!5.62e-33!57;UBERON:0007023!3.36e-30!115;UBERON:0003075!3.47e-29!86;UBERON:0007284!3.47e-29!86;UBERON:0002346!1.87e-27!90;UBERON:0002780!5.44e-27!41;UBERON:0001890!5.44e-27!41;UBERON:0006240!5.44e-27!41;UBERON:0001017!7.15e-27!82;UBERON:0002616!7.18e-27!59;UBERON:0005743!7.48e-27!86;UBERON:0003080!3.29e-26!42;UBERON:0000073!3.41e-25!94;UBERON:0001016!3.41e-25!94;UBERON:0002020!1.16e-24!34;UBERON:0003528!1.16e-24!34;UBERON:0001869!1.49e-23!32;UBERON:0000955!3.51e-23!69;UBERON:0006238!3.51e-23!69;UBERON:0002791!1.05e-22!33;UBERON:0001893!6.62e-22!34;UBERON:0003056!2.65e-21!61;UBERON:0002619!6.96e-19!22;UBERON:0000956!7.63e-19!25;UBERON:0000203!7.63e-19!25;UBERON:0004121!1.28e-15!169;UBERON:0001950!4.67e-15!20;UBERON:0000924!5.15e-15!173;UBERON:0006601!5.15e-15!173;UBERON:0000033!1.22e-12!123;UBERON:0000153!1.10e-11!129;UBERON:0007811!1.10e-11!129;UBERON:0002420!3.34e-10!9;UBERON:0007245!3.34e-10!9;UBERON:0010009!3.34e-10!9;UBERON:0010011!3.34e-10!9;UBERON:0000454!3.34e-10!9;UBERON:0000025!5.49e-10!194;UBERON:0000064!9.87e-10!219;UBERON:0000477!1.15e-09!286;UBERON:0001737!1.44e-09!9;UBERON:0000349!4.41e-09!5;UBERON:0005383!3.20e-08!3;UBERON:0005382!3.20e-08!3;UBERON:0002771!4.54e-08!3;UBERON:0003076!6.08e-08!15;UBERON:0003057!6.08e-08!15;UBERON:0001871!6.33e-08!7;UBERON:0004111!2.15e-07!241;UBERON:0002308!2.96e-07!9;UBERON:0000125!2.96e-07!9;UBERON:0000200!4.47e-07!6;UBERON:0004732!5.91e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.48e-25;34!UBERON:0002020;3.48e-25;34!UBERON:0001869;4.40e-22;32!UBERON:0002791;5.87e-21;32!UBERON:0001893;7.95e-20;34!UBERON:0002619;5.42e-18;22!UBERON:0002780;1.43e-17;41!UBERON:0001890;1.43e-17;41!UBERON:0000073;4.68e-16;53!UBERON:0002616;4.68e-16;53!UBERON:0000956;6.96e-16;25!UBERON:0000203;6.96e-16;25!UBERON:0000955;7.73e-16;68!UBERON:0004732;1.35e-14;13!UBERON:0001017;7.44e-14;75!UBERON:0001950;7.52e-14;20!UBERON:0002784;6.44e-13;4!UBERON:0000941;8.64e-13;1!UBERON:0001785;8.64e-13;1!UBERON:0002464;8.64e-13;1!UBERON:0004904;8.64e-13;1!UBERON:0001021;8.64e-13;1!UBERON:0002420;1.45e-12;9!UBERON:0007245;1.45e-12;9!UBERON:0010009;1.45e-12;9!UBERON:0010011;1.45e-12;9!UBERON:0000454;1.45e-12;9!UBERON:0000125;1.70e-12;9!UBERON:0002308;1.70e-12;9!UBERON:0001016;2.02e-11;83!UBERON:0000349;1.73e-10;5!UBERON:0004733;2.23e-09;12!UBERON:0002028;2.23e-09;12!UBERON:0002298;7.47e-09;6!UBERON:0000200;1.22e-08;6!UBERON:0009663;8.35e-08;7!UBERON:0001894;9.24e-08;7!UBERON:0007023;1.24e-07;114!UBERON:0001871;1.38e-07;6!UBERON:0001897;2.15e-07;2!UBERON:0010225;2.15e-07;2!UBERON:0001873;2.35e-07;2!UBERON:0001954;2.66e-07;2!UBERON:0001875;2.66e-07;2!UBERON:0003022;2.66e-07;2!UBERON:0002421;2.66e-07;2!UBERON:0006514;2.66e-07;2!UBERON:0002600;2.66e-07;2!UBERON:0001876;3.09e-07;2!UBERON:0001905;3.48e-07;2!UBERON:0002757;3.48e-07;2!UBERON:0010134;3.48e-07;2!UBERON:0005408;3.48e-07;2!UBERON:0001899;3.48e-07;2!UBERON:0002148;3.93e-07;2!UBERON:0002702;3.93e-07;2!UBERON:0006331;3.93e-07;2!UBERON:0009662;3.93e-07;2!UBERON:0002771;4.98e-07;2!UBERON:0003714;4.98e-07;2!UBERON:0005162;4.98e-07;2!UBERON:0000122;4.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.42e-38,56;UBERON:0005068,1.42e-38,56;UBERON:0006241,1.42e-38,56;UBERON:0007135,1.42e-38,56;UBERON:0000073,4.66e-35,53;UBERON:0002616,4.66e-35,53;UBERON:0001016,1.15e-30,89;UBERON:0001017,6.10e-30,81;UBERON:0003075,6.51e-30,82;UBERON:0007284,6.51e-30,82;UBERON:0002346,1.86e-28,86;UBERON:0002780,8.32e-27,41;UBERON:0001890,8.32e-27,41;UBERON:0003080,8.32e-27,41;UBERON:0006240,8.32e-27,41;UBERON:0000955,1.10e-26,68;UBERON:0006238,1.10e-26,68;UBERON:0003528,4.22e-26,34;UBERON:0002020,4.22e-26,34;UBERON:0010371,2.86e-23,104;UBERON:0002791,5.51e-22,32;UBERON:0001869,5.51e-22,32;UBERON:0003056,1.65e-21,61;UBERON:0007023,2.74e-21,114;UBERON:0001893,1.10e-20,34;UBERON:0002619,5.50e-18,22;UBERON:0010314,5.56e-18,132;UBERON:0004121,1.68e-17,171;UBERON:0000924,1.68e-17,171;UBERON:0006601,1.68e-17,171;UBERON:0000956,7.06e-16,25;UBERON:0000203,7.06e-16,25;UBERON:0004732,1.43e-14,13;UBERON:0001950,7.52e-14,20;UBERON:0002784,6.44e-13,4;UBERON:0003076,8.99e-13,15;UBERON:0003057,8.99e-13,15;UBERON:0000941,9.73e-13,1;UBERON:0001785,9.73e-13,1;UBERON:0002464,9.73e-13,1;UBERON:0004904,9.73e-13,1;UBERON:0001021,9.73e-13,1;UBERON:0003902,9.73e-13,1;UBERON:0005425,9.73e-13,1;UBERON:0002420,1.34e-12,9;UBERON:0007245,1.34e-12,9;UBERON:0010009,1.34e-12,9;UBERON:0010011,1.34e-12,9;UBERON:0000454,1.34e-12,9;UBERON:0000125,1.70e-12,9;UBERON:0002308,1.70e-12,9;UBERON:0011216,2.86e-11,223;UBERON:0000349,1.69e-10,5;UBERON:0000025,4.08e-10,192;UBERON:0004733,2.26e-09,12;UBERON:0002028,2.26e-09,12;UBERON:0007277,2.26e-09,12;UBERON:0002298,7.93e-09,6;UBERON:0000200,1.31e-08,6;UBERON:0009663,8.08e-08,7;UBERON:0001894,9.24e-08,7;UBERON:0006222,9.24e-08,7;UBERON:0004111,1.05e-07,240;UBERON:0001871,1.43e-07,6;UBERON:0001897,2.15e-07,2;UBERON:0010225,2.15e-07,2;UBERON:0001873,2.28e-07,2;UBERON:0010122,2.28e-07,2;UBERON:0001875,2.58e-07,2;UBERON:0006514,2.58e-07,2;UBERON:0001954,2.74e-07,2;UBERON:0003022,2.74e-07,2;UBERON:0002421,2.74e-07,2;UBERON:0002600,2.74e-07,2;UBERON:0001876,2.91e-07,2;UBERON:0001905,3.48e-07,2;UBERON:0002757,3.48e-07,2;UBERON:0010134,3.48e-07,2;UBERON:0005408,3.48e-07,2;UBERON:0001899,3.48e-07,2;UBERON:0002702,3.93e-07,2;UBERON:0002148,4.17e-07,2;UBERON:0006331,4.17e-07,2;UBERON:0009662,4.17e-07,2;UBERON:0003714,5.28e-07,2;UBERON:0005162,5.28e-07,2;UBERON:0000122,5.28e-07,2;UBERON:0002771,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,1.43246690842614,0.890894042497916,0,5.96488588659779,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85741385813839,0.120596438625408,1.52581736317083,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,7.20504346451747,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,7.15706720828373,0.272406812223151,0,0.137539436597234,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,2.58565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.34228891392159,0.1251909307065,8.027728739661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,0.673498977531838,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8339315265117,0.159633859057151,0.41023272848151,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46754669029693,0,0.0634158101939068,0,0,0,0,0,3.74991285114801,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30032861210352,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,9.12086383404657,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,1.43246690842614,0.890894042497916,0,5.96488588659779,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85741385813839,0.120596438625408,1.52581736317083,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,7.20504346451747,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,7.15706720828373,0.272406812223151,0,0.137539436597234,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,2.58565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.34228891392159,0.1251909307065,8.027728739661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,0.673498977531838,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8339315265117,0.159633859057151,0.41023272848151,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46754669029693,0,0.0634158101939068,0,0,0,0,0,3.74991285114801,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30032861210352,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,9.12086383404657,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p10@CDHR3 | |||
}} | }} |
Latest revision as of 22:02, 24 September 2015
Short description: | p10@CDHR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CDHR3_5end |
Coexpression cluster: | C256_occipital_caudate_amygdala_medial_thalamus_hippocampus_medulla |
Association with transcript: | -400bp_to_ENST00000487084_5end |
EntrezGene: | CDHR3 |
HGNC: | 26308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data