FFCP PHASE1:Hg19::chr6:3228999..3229024,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003mvi.1_5end | |||
|cluster_id=chr6:3228999..3229024,+ | |||
|description=CAGE_peak_1_at_uc003mvi.1_5end | |||
|id=chr6:3228999..3229024,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.20e-10!25;CL:0000133!1.93e-10!59;CL:0000047!1.08e-09!8;CL:0000221!8.39e-08!71;CL:0002605!1.71e-07!3;CL:0000128!3.11e-07!7;CL:0000126!3.11e-07!7;CL:0000127!3.11e-07!7;CL:0002453!3.11e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.41e-18;25!CL:0002605;2.04e-16;3!CL:0000123;6.66e-12;2!CL:0000242;6.66e-12;2!CL:0000047;9.73e-12;2!CL:0000540;8.29e-09;6!CL:0000404;8.29e-09;6!CL:0000128;2.61e-07;7!CL:0000126;2.61e-07;7!CL:0000127;2.61e-07;7!CL:0000095;8.15e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.50e-18,25;CL:0000047,8.18e-17,8;CL:0002605,2.34e-16,3;CL:0000242,4.94e-12,2;CL:0000133,3.54e-10,59;CL:0000540,8.63e-09,6;CL:0000031,8.63e-09,6;CL:0000404,8.63e-09,6;CL:0000221,5.54e-08,72;CL:0000128,2.76e-07,7;CL:0000126,2.76e-07,7;CL:0000127,2.76e-07,7;CL:0002453,2.76e-07,7;CL:0000095,7.85e-07,17;CL:0000123,7.85e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.43e-17;3!UBERON:0003057;4.43e-17;3!CL:0000031;8.29e-09;6!UBERON:0006601;8.61e-08;82!CL:0000133;3.61e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.60e-77!57;UBERON:0005068!1.60e-77!57;UBERON:0006241!1.60e-77!57;UBERON:0007135!1.60e-77!57;UBERON:0001017!1.65e-72!82;UBERON:0000073!1.04e-70!94;UBERON:0001016!1.04e-70!94;UBERON:0005743!2.11e-68!86;UBERON:0002616!4.44e-64!59;UBERON:0003075!2.88e-62!86;UBERON:0007284!2.88e-62!86;UBERON:0002346!8.90e-59!90;UBERON:0002780!6.45e-58!41;UBERON:0001890!6.45e-58!41;UBERON:0006240!6.45e-58!41;UBERON:0000955!2.25e-57!69;UBERON:0006238!2.25e-57!69;UBERON:0002020!1.22e-56!34;UBERON:0003528!1.22e-56!34;UBERON:0003080!2.72e-56!42;UBERON:0001893!4.28e-56!34;UBERON:0002791!2.06e-54!33;UBERON:0001869!1.08e-52!32;UBERON:0004121!4.41e-45!169;UBERON:0003056!2.13e-44!61;UBERON:0000924!1.33e-43!173;UBERON:0006601!1.33e-43!173;UBERON:0000956!2.84e-40!25;UBERON:0000203!2.84e-40!25;UBERON:0000033!1.00e-34!123;UBERON:0007023!1.23e-34!115;UBERON:0002619!1.95e-34!22;UBERON:0000153!6.64e-34!129;UBERON:0007811!6.64e-34!129;UBERON:0001950!5.35e-31!20;UBERON:0003076!2.67e-21!15;UBERON:0003057!2.67e-21!15;UBERON:0000025!5.49e-18!194;UBERON:0002308!1.46e-17!9;UBERON:0000125!1.46e-17!9;UBERON:0004732!2.16e-17!13;UBERON:0004733!1.78e-15!12;UBERON:0002028!1.78e-15!12;UBERON:0007277!1.78e-15!12;UBERON:0000064!1.46e-14!219;UBERON:0009663!1.02e-13!7;UBERON:0002420!1.19e-13!9;UBERON:0007245!1.19e-13!9;UBERON:0010009!1.19e-13!9;UBERON:0010011!1.19e-13!9;UBERON:0000454!1.19e-13!9;UBERON:0002298!8.84e-13!8;UBERON:0000200!8.00e-12!6;UBERON:0004111!1.23e-11!241;UBERON:0000483!1.85e-11!309;UBERON:0000119!3.40e-11!312;UBERON:0002021!2.35e-10!5;UBERON:0000477!2.40e-10!286;UBERON:0001872!2.54e-10!5;UBERON:0002680!6.12e-10!9;UBERON:0001895!6.12e-10!9;UBERON:0010092!6.12e-10!9;UBERON:0001871!4.58e-09!7;UBERON:0000369!1.54e-08!4;UBERON:0002435!1.54e-08!4;UBERON:0000204!1.54e-08!4;UBERON:0010082!1.54e-08!4;UBERON:0000475!7.57e-08!365;UBERON:0002240!8.96e-08!3;UBERON:0001896!1.19e-07!3;UBERON:0005290!1.19e-07!3;UBERON:0010096!1.19e-07!3;UBERON:0000922!2.46e-07!612;UBERON:0000988!3.02e-07!3;UBERON:0006331!4.30e-07!3;UBERON:0005383!5.07e-07!3;UBERON:0005382!5.07e-07!3;UBERON:0002771!5.85e-07!3;UBERON:0000349!9.92e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.90e-28;34!UBERON:0002020;5.90e-28;34!UBERON:0002791;1.34e-24;32!UBERON:0001869;7.27e-24;32!UBERON:0000956;1.22e-22;25!UBERON:0000203;1.22e-22;25!UBERON:0002298;4.77e-22;6!UBERON:0001893;1.22e-20;34!UBERON:0000073;1.83e-18;53!UBERON:0002616;1.83e-18;53!UBERON:0001016;2.73e-18;83!UBERON:0001017;5.11e-18;75!UBERON:0002240;4.43e-17;3!UBERON:0005174;4.43e-17;3!UBERON:0001137;4.43e-17;3!UBERON:0001896;7.81e-17;3!UBERON:0005290;7.81e-17;3!UBERON:0000955;1.71e-16;68!UBERON:0002780;2.36e-15;41!UBERON:0001890;2.36e-15;41!UBERON:0001950;3.90e-15;20!UBERON:0004732;3.05e-14;13!UBERON:0002619;1.03e-13;22!UBERON:0002148;2.00e-11;2!UBERON:0006331;2.00e-11;2!UBERON:0009662;2.00e-11;2!UBERON:0004733;6.37e-11;12!UBERON:0002028;6.37e-11;12!UBERON:0000125;2.45e-09;9!UBERON:0002308;2.45e-09;9!UBERON:0000988;6.71e-08;3!UBERON:0001871;2.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.62e-53,89;UBERON:0001017,8.19e-48,81;UBERON:0001049,4.02e-40,56;UBERON:0005068,4.02e-40,56;UBERON:0006241,4.02e-40,56;UBERON:0007135,4.02e-40,56;UBERON:0000073,4.94e-31,53;UBERON:0002616,4.94e-31,53;UBERON:0003528,1.51e-30,34;UBERON:0002020,1.51e-30,34;UBERON:0004121,7.38e-29,171;UBERON:0000924,7.38e-29,171;UBERON:0006601,7.38e-29,171;UBERON:0003075,9.62e-29,82;UBERON:0007284,9.62e-29,82;UBERON:0000955,1.69e-28,68;UBERON:0006238,1.69e-28,68;UBERON:0002346,3.45e-27,86;UBERON:0010371,3.04e-26,104;UBERON:0002791,2.77e-24,32;UBERON:0001869,2.77e-24,32;UBERON:0001893,9.62e-23,34;UBERON:0000956,1.35e-22,25;UBERON:0000203,1.35e-22,25;UBERON:0002298,5.57e-22,6;UBERON:0003076,1.10e-21,15;UBERON:0003057,1.10e-21,15;UBERON:0002780,1.23e-21,41;UBERON:0001890,1.23e-21,41;UBERON:0003080,1.23e-21,41;UBERON:0006240,1.23e-21,41;UBERON:0011216,1.22e-20,223;UBERON:0002240,4.69e-17,3;UBERON:0005174,4.69e-17,3;UBERON:0001137,4.69e-17,3;UBERON:0001896,9.44e-17,3;UBERON:0005290,9.44e-17,3;UBERON:0010096,9.44e-17,3;UBERON:0010314,4.87e-16,132;UBERON:0003056,6.23e-16,61;UBERON:0001950,4.06e-15,20;UBERON:0004732,3.06e-14,13;UBERON:0002619,1.07e-13,22;UBERON:0002148,2.01e-11,2;UBERON:0006331,2.01e-11,2;UBERON:0009662,2.01e-11,2;UBERON:0004733,6.86e-11,12;UBERON:0002028,6.86e-11,12;UBERON:0007277,6.86e-11,12;UBERON:0007023,1.30e-09,114;UBERON:0000025,1.53e-09,192;UBERON:0000125,2.40e-09,9;UBERON:0002308,2.40e-09,9;UBERON:0000988,6.72e-08,3;UBERON:0001871,2.64e-07,6;UBERON:0000941,8.97e-07,1;UBERON:0001785,8.97e-07,1;UBERON:0002464,8.97e-07,1;UBERON:0004904,8.97e-07,1;UBERON:0001021,8.97e-07,1;UBERON:0003902,8.97e-07,1;UBERON:0005425,8.97e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,2.0036519099174,1.91624195102038,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,1.30139853857622,2.31986643833309,3.01529277601828,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66982576691332,1.99613798001194,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0.885741385813839,0.60298219312704,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0,0.702793337176017,0,0,0,0,0,6.42752799424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.321506296930038,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97350799631566,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,2.65820453990096,1.58634144372552,0.500763722825999,5.73409195690071,1.10929051536852,3.04272374412779,0,0,0,0,0,3.27834434064817,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53473245564382,2.04867141653695,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.957803154342908,0.205116364240755,5.04143392443436,0.414943514785307,0.484426936895553,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,2.27355476151302,0.380494861163441,12.580420607419,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.747667062745149,0.0657727735628491,0,0,0,1.72827148907602,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,1.63757624423474,0.994753875806841,0,12.3111229422466,0,0.754814217833368,0,0,0,0,0.707029641304878,8.04864715171276,2.67341760294377,2.113278637917,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,6.98161104544604,0,0,0,0,0.378499274505237,0.218531143927391,0.506794004045748,0.101988829741982,0,0.0918948995348449,0,0,0,2.48750831837634,0.827463966895162,0,0.476128862927481,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@uc003mvi.1 | |||
}} |
Latest revision as of 00:22, 31 July 2015
Short description: | p1@uc003mvi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003mvi.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003mvi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.50e-18 | 25 |
neuronal stem cell | 8.18e-17 | 8 |
astrocyte of the cerebral cortex | 2.34e-16 | 3 |
Merkel cell | 4.94e-12 | 2 |
neurectodermal cell | 3.54e-10 | 59 |
neuron | 8.63e-09 | 6 |
neuroblast | 8.63e-09 | 6 |
electrically signaling cell | 8.63e-09 | 6 |
ectodermal cell | 5.54e-08 | 72 |
oligodendrocyte | 2.76e-07 | 7 |
macroglial cell | 2.76e-07 | 7 |
astrocyte | 2.76e-07 | 7 |
oligodendrocyte precursor cell | 2.76e-07 | 7 |
neuron associated cell | 7.85e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.85e-07 | 17 |