FFCP PHASE1:Hg19::chr8:50823956..50823985,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13740 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-247bp_to_ENST00000522124_5end | |||
|cluster_id=chr8:50823956..50823985,+ | |||
|description=CAGE_peak_1_at_SNTG1_5end | |||
|id=chr8:50823956..50823985,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.05e-09!8;CL:0002319!2.56e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.90e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-18;82!UBERON:0006215;5.01e-11;3!UBERON:0010122;1.09e-08;2 | |||
|ontology_enrichment_disease=DOID:171!2.27e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.74e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.97e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.09e-92!94;UBERON:0001016!8.09e-92!94;UBERON:0001017!1.05e-89!82;UBERON:0005743!8.88e-88!86;UBERON:0001049!1.75e-87!57;UBERON:0005068!1.75e-87!57;UBERON:0006241!1.75e-87!57;UBERON:0007135!1.75e-87!57;UBERON:0002616!1.13e-73!59;UBERON:0000955!7.71e-72!69;UBERON:0006238!7.71e-72!69;UBERON:0002780!1.40e-71!41;UBERON:0001890!1.40e-71!41;UBERON:0006240!1.40e-71!41;UBERON:0003080!1.25e-69!42;UBERON:0002346!2.08e-67!90;UBERON:0003075!9.09e-63!86;UBERON:0007284!9.09e-63!86;UBERON:0002020!4.27e-62!34;UBERON:0003528!4.27e-62!34;UBERON:0001893!5.83e-62!34;UBERON:0002791!7.09e-60!33;UBERON:0001869!2.01e-58!32;UBERON:0000924!1.98e-52!173;UBERON:0006601!1.98e-52!173;UBERON:0003056!1.76e-49!61;UBERON:0004121!1.60e-48!169;UBERON:0002619!1.62e-46!22;UBERON:0000956!9.68e-44!25;UBERON:0000203!9.68e-44!25;UBERON:0001950!4.53e-42!20;UBERON:0007023!1.37e-41!115;UBERON:0000033!3.33e-39!123;UBERON:0000153!1.09e-36!129;UBERON:0007811!1.09e-36!129;UBERON:0002420!8.21e-20!9;UBERON:0007245!8.21e-20!9;UBERON:0010009!8.21e-20!9;UBERON:0010011!8.21e-20!9;UBERON:0000454!8.21e-20!9;UBERON:0002308!1.59e-19!9;UBERON:0000125!1.59e-19!9;UBERON:0000025!1.93e-18!194;UBERON:0003076!3.02e-18!15;UBERON:0003057!3.02e-18!15;UBERON:0009663!1.18e-15!7;UBERON:0000200!9.36e-15!6;UBERON:0001871!1.53e-14!7;UBERON:0004733!3.64e-13!12;UBERON:0002028!3.64e-13!12;UBERON:0007277!3.64e-13!12;UBERON:0002021!1.97e-12!5;UBERON:0001872!2.47e-12!5;UBERON:0000349!2.97e-12!5;UBERON:0004111!3.87e-12!241;UBERON:0002298!4.23e-12!8;UBERON:0004732!5.25e-12!13;UBERON:0001894!8.15e-11!7;UBERON:0006222!8.15e-11!7;UBERON:0000483!2.10e-10!309;UBERON:0000369!2.57e-10!4;UBERON:0002435!2.57e-10!4;UBERON:0000204!2.57e-10!4;UBERON:0010082!2.57e-10!4;UBERON:0000119!3.64e-10!312;UBERON:0000477!6.79e-10!286;UBERON:0000064!2.09e-09!219;UBERON:0000475!3.82e-09!365;UBERON:0000922!4.58e-09!612;UBERON:0000923!6.65e-09!604;UBERON:0005291!6.65e-09!604;UBERON:0006598!6.65e-09!604;UBERON:0002532!6.65e-09!604;UBERON:0002050!7.45e-09!605;UBERON:0005423!7.45e-09!605;UBERON:0002771!1.54e-08!3;UBERON:0002680!1.86e-08!9;UBERON:0001895!1.86e-08!9;UBERON:0010092!1.86e-08!9;UBERON:0005383!2.77e-08!3;UBERON:0005382!2.77e-08!3;UBERON:0000988!3.09e-07!3;UBERON:0006331!3.52e-07!3;UBERON:0002240!4.95e-07!3;UBERON:0000468!6.77e-07!659;UBERON:0001896!9.11e-07!3;UBERON:0005290!9.11e-07!3;UBERON:0010096!9.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.77e-77;32!UBERON:0003528;1.92e-74;34!UBERON:0002020;1.92e-74;34!UBERON:0002619;1.23e-72;22!UBERON:0002791;2.31e-72;32!UBERON:0001893;6.07e-70;34!UBERON:0001950;1.30e-65;20!UBERON:0000956;1.46e-63;25!UBERON:0000203;1.46e-63;25!UBERON:0002780;8.12e-62;41!UBERON:0001890;8.12e-62;41!UBERON:0000073;1.21e-47;53!UBERON:0002616;1.21e-47;53!UBERON:0001017;7.40e-38;75!UBERON:0000955;6.31e-36;68!UBERON:0001016;1.52e-34;83!UBERON:0002420;1.48e-24;9!UBERON:0007245;1.48e-24;9!UBERON:0010009;1.48e-24;9!UBERON:0010011;1.48e-24;9!UBERON:0000454;1.48e-24;9!UBERON:0000125;3.28e-24;9!UBERON:0002308;3.28e-24;9!UBERON:0000200;2.93e-22;6!UBERON:0001871;1.00e-18;6!UBERON:0001872;1.56e-18;5!UBERON:0002021;1.56e-18;5!UBERON:0000349;2.67e-18;5!UBERON:0009663;3.99e-18;7!UBERON:0000369;2.86e-15;4!UBERON:0002435;2.86e-15;4!UBERON:0000204;2.86e-15;4!UBERON:0011216;1.65e-13;132!UBERON:0007023;2.29e-12;114!UBERON:0005383;4.03e-12;3!UBERON:0005382;4.03e-12;3!UBERON:0001870;6.84e-12;3!UBERON:0002680;2.02e-09;9!UBERON:0001895;2.02e-09;9!UBERON:0002771;6.34e-09;2!UBERON:0001873;1.09e-08;2!UBERON:0002702;1.18e-08;2!UBERON:0001954;1.36e-08;2!UBERON:0003022;1.36e-08;2!UBERON:0002421;1.36e-08;2!UBERON:0002600;1.36e-08;2!UBERON:0002346;1.54e-08;4!UBERON:0000923;1.54e-08;4!UBERON:0010316;1.54e-08;4!UBERON:0005291;1.54e-08;4!UBERON:0001876;2.93e-08;2!UBERON:0001894;6.57e-08;7!UBERON:0002148;7.25e-08;2!UBERON:0006331;7.25e-08;2!UBERON:0009662;7.25e-08;2!UBERON:0000007;8.49e-08;2!UBERON:0010314;8.57e-08;132!UBERON:0001875;1.03e-07;2!UBERON:0006514;1.03e-07;2!UBERON:0001897;1.16e-07;2!UBERON:0010225;1.16e-07;2!UBERON:0004733;5.48e-07;12!UBERON:0002028;5.48e-07;12!UBERON:0002050;6.59e-07;5!UBERON:0005423;6.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-92,81;UBERON:0001049,7.17e-92,56;UBERON:0005068,7.17e-92,56;UBERON:0006241,7.17e-92,56;UBERON:0007135,7.17e-92,56;UBERON:0001016,1.34e-89,89;UBERON:0000073,1.01e-87,53;UBERON:0002616,1.01e-87,53;UBERON:0003528,5.81e-87,34;UBERON:0002020,5.81e-87,34;UBERON:0001869,1.09e-86,32;UBERON:0002780,1.74e-86,41;UBERON:0001890,1.74e-86,41;UBERON:0003080,1.74e-86,41;UBERON:0006240,1.74e-86,41;UBERON:0001893,2.73e-81,34;UBERON:0002791,1.15e-80,32;UBERON:0000955,4.53e-77,68;UBERON:0006238,4.53e-77,68;UBERON:0002619,9.87e-73,22;UBERON:0002346,1.22e-66,86;UBERON:0001950,1.06e-65,20;UBERON:0000956,1.20e-63,25;UBERON:0000203,1.20e-63,25;UBERON:0003075,5.22e-60,82;UBERON:0007284,5.22e-60,82;UBERON:0003056,8.32e-56,61;UBERON:0004121,1.41e-50,171;UBERON:0000924,1.41e-50,171;UBERON:0006601,1.41e-50,171;UBERON:0010371,6.23e-48,104;UBERON:0007023,2.49e-38,114;UBERON:0010314,7.69e-36,132;UBERON:0011216,5.98e-33,223;UBERON:0002420,1.79e-24,9;UBERON:0007245,1.79e-24,9;UBERON:0010009,1.79e-24,9;UBERON:0010011,1.79e-24,9;UBERON:0000454,1.79e-24,9;UBERON:0000125,4.54e-24,9;UBERON:0002308,4.54e-24,9;UBERON:0000200,2.73e-22,6;UBERON:0000025,3.14e-20,192;UBERON:0001871,9.74e-19,6;UBERON:0002021,1.23e-18,5;UBERON:0001872,1.77e-18,5;UBERON:0000349,2.35e-18,5;UBERON:0009663,4.86e-18,7;UBERON:0000369,2.61e-15,4;UBERON:0002435,2.61e-15,4;UBERON:0000204,2.61e-15,4;UBERON:0010082,2.61e-15,4;UBERON:0004111,2.72e-14,240;UBERON:0005383,4.03e-12,3;UBERON:0005382,4.03e-12,3;UBERON:0001870,6.97e-12,3;UBERON:0003076,3.07e-10,15;UBERON:0003057,3.07e-10,15;UBERON:0000483,5.95e-10,306;UBERON:0000119,9.17e-10,309;UBERON:0002680,2.40e-09,9;UBERON:0001895,2.40e-09,9;UBERON:0010092,2.40e-09,9;UBERON:0002771,6.11e-09,2;UBERON:0000923,6.52e-09,560;UBERON:0010316,6.52e-09,560;UBERON:0005291,6.52e-09,560;UBERON:0006598,6.52e-09,560;UBERON:0010317,6.52e-09,560;UBERON:0002532,6.52e-09,560;UBERON:0002050,9.17e-09,564;UBERON:0001873,1.07e-08,2;UBERON:0010122,1.07e-08,2;UBERON:0002702,1.15e-08,2;UBERON:0001954,1.34e-08,2;UBERON:0003022,1.34e-08,2;UBERON:0002421,1.34e-08,2;UBERON:0002600,1.34e-08,2;UBERON:0001876,2.88e-08,2;UBERON:0005423,3.71e-08,581;UBERON:0001894,6.09e-08,7;UBERON:0006222,6.09e-08,7;UBERON:0000007,8.06e-08,2;UBERON:0002148,8.35e-08,2;UBERON:0006331,8.35e-08,2;UBERON:0009662,8.35e-08,2;UBERON:0000922,8.79e-08,592;UBERON:0001897,1.06e-07,2;UBERON:0010225,1.06e-07,2;UBERON:0001875,1.40e-07,2;UBERON:0006514,1.40e-07,2;UBERON:0004733,6.23e-07,12;UBERON:0002028,6.23e-07,12;UBERON:0007277,6.23e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54094624222463,2.60279707715243,3.86644406388848,2.34522771468088,4.46557126157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96488588659779,10.4095368143779,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,3.87733098438087,4.26733251544516,3.99227596002388,0,0,0,0,0,0,0.344743373241465,0,0.694499979733169,12.4003794013937,20.0190088118177,9.15490417902499,3.64911557773041,3.25102380848902,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.876214728748802,0,0.937057782901357,0,0,0,0,0,19.5886567443514,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0.451961481561065,0,0,5.31810686029381,0,0.160317640503067,0,0,0,0,0.857974989309823,0,0,0,0.135904206073614,0,0,0,3.00210144354895,3.55953985119182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1332156573302,19.88569729229,0,0.137539436597234,0,0,0,3.82722206945555,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61992277812342,4.23144325576608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5188863395708,26.479699483726,24.9129952105935,0.573409195690071,0.887432412294818,0.869349641179368,0,0,0,0,0,3.74667924645505,0.869526171664951,0,0,3.32883516901568,0,0,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3012938157667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,1.25812753484717,0,0,18.9191678890498,1.36329340684902,1.11728983594649,0,0,0,0,0,4.81719188223446,19.8375206855819,26.0203190263157,11.691632761723,10.8390829375339,3.8728061379962,11.3032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59255575405084,16.4026400708908,26.2492231556504,3.42445375047097,19.6910931246559,0,0,8.79356221798103,0,0.535701835878287,0,1.82089681270989,9.1064876540519,0,0,0,0.747667062745149,6.18264071490781,0,0,0,12.2550160134481,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49663707921847,0.297046400327086,1.2679671827502,0,0,0.257831551894309,0,0,0,0,0,0,0.573358332605805,0,3.73953196050031,19.1994303749766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,4.75791780964718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SNTG1 | |||
}} |
Latest revision as of 10:46, 18 September 2015
Short description: | p1@SNTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNTG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -247bp_to_ENST00000522124_5end |
EntrezGene: | SNTG1 |
HGNC: | 13740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.90e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.97e-08 | 10 |