FFCP PHASE1:Hg19::chr10:26505387..26505457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2572 | |EntrezGene=2572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4093 | |HGNC=4093 | ||
|TSSclassifier=strong | |||
|UniProt=Q05329 | |UniProt=Q05329 | ||
|association_with_transcript=-136bp_to_ENST00000259271_5end | |association_with_transcript=-136bp_to_ENST00000259271_5end | ||
|cluster_id=chr10:26505387..26505457,+ | |||
|coexpression_cluster_id=C1309 | |||
|description=CAGE_peak_2_at_GAD2_5end | |description=CAGE_peak_2_at_GAD2_5end | ||
|id=chr10:26505387..26505457,+ | |id=chr10:26505387..26505457,+ | ||
|ontology_enrichment_celltype=CL:0000047!6.58e-08!8;CL:0000064!5.54e-07!3;CL:0005012!5.54e-07!3;CL:0000067!5.54e-07!3;CL:0002304!5.54e-07!3;CL:0002322!6.42e-07!5 | |ontology_enrichment_celltype=CL:0000047!6.58e-08!8;CL:0000064!5.54e-07!3;CL:0005012!5.54e-07!3;CL:0000067!5.54e-07!3;CL:0002304!5.54e-07!3;CL:0002322!6.42e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.16e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.23e-15;82!UBERON:0006215;3.14e-09;3!UBERON:0010122;6.27e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;7.50e-72;32!UBERON:0001893;1.17e-68;34!UBERON:0003528;1.55e-68;34!UBERON:0002020;1.55e-68;34!UBERON:0002791;1.74e-67;32!UBERON:0002619;2.95e-67;22!UBERON:0001950;9.31e-62;20!UBERON:0002780;1.83e-60;41!UBERON:0001890;1.83e-60;41!UBERON:0000956;9.68e-59;25!UBERON:0000203;9.68e-59;25!UBERON:0000073;5.03e-50;53!UBERON:0002616;5.03e-50;53!UBERON:0001017;2.17e-37;75!UBERON:0000955;8.52e-36;68!UBERON:0001016;1.24e-30;83!UBERON:0002420;2.43e-22;9!UBERON:0007245;2.43e-22;9!UBERON:0010009;2.43e-22;9!UBERON:0010011;2.43e-22;9!UBERON:0000454;2.43e-22;9!UBERON:0000125;8.42e-22;9!UBERON:0002308;8.42e-22;9!UBERON:0001871;1.82e-21;6!UBERON:0000200;1.82e-18;6!UBERON:0009663;8.06e-17;7!UBERON:0001872;4.69e-16;5!UBERON:0002021;7.59e-16;5!UBERON:0000349;1.05e-15;5!UBERON:0000369;3.56e-14;4!UBERON:0002435;3.56e-14;4!UBERON:0000204;3.56e-14;4!UBERON:0007023;2.77e-13;114!UBERON:0011216;2.24e-12;132!UBERON:0005383;4.07e-11;3!UBERON:0005382;4.07e-11;3!UBERON:0004733;1.09e-10;12!UBERON:0002028;1.09e-10;12!UBERON:0001870;3.73e-10;3!UBERON:0004732;8.56e-10;13!UBERON:0010314;6.30e-09;132!UBERON:0001873;6.27e-08;2!UBERON:0002680;8.75e-08;9!UBERON:0001895;8.75e-08;9!UBERON:0002298;1.10e-07;6!UBERON:0001875;2.70e-07;2!UBERON:0006514;2.70e-07;2!UBERON:0001876;2.83e-07;2!UBERON:0001894;3.42e-07;7!UBERON:0002702;3.69e-07;2!UBERON:0002771;4.04e-07;2!UBERON:0001897;4.79e-07;2!UBERON:0001954;4.79e-07;2!UBERON:0003022;4.79e-07;2!UBERON:0002421;4.79e-07;2!UBERON:0010225;4.79e-07;2!UBERON:0002600;4.79e-07;2 | |||
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|short_description=p2@GAD2 | |short_description=p2@GAD2 | ||
}} | }} |
Latest revision as of 17:38, 17 September 2015
Short description: | p2@GAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GAD2_5end |
Coexpression cluster: | C1309_putamen_parietal_caudate_temporal_duodenum_Neurons_occipital |
Association with transcript: | -136bp_to_ENST00000259271_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q05329 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.16e-10 | 8 |