FFCP PHASE1:Hg19::chr3:186648149..186648166,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6480|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10860|TSSclassifier=S|UniProt=P15907|association_with_transcript=-107bp_to_ENST00000169298_5end|coexpression_cluster_id=C296|description=CAGE_peak_12_at_ST6GAL1_5end|id=chr3:186648149..186648166,+|ontology_enrichment_celltype=CL:0000115!2.56e-08!35|ontology_enrichment_celltype_v019=CL:0002262;5.10e-13;2!CL:1000398;5.10e-13;2|ontology_enrichment_celltype_v019_2=CL:0002262,4.68e-13,2;CL:1000398,4.68e-13,2|ontology_enrichment_development_v019=UBERON:0006241;2.77e-09;3!UBERON:0003057;2.77e-09;3!UBERON:0004140;3.72e-07;1!UBERON:0005425;3.72e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.92e-42!115;UBERON:0001049!2.35e-24!57;UBERON:0005068!2.35e-24!57;UBERON:0006241!2.35e-24!57;UBERON:0007135!2.35e-24!57;UBERON:0000073!3.71e-24!94;UBERON:0001016!3.71e-24!94;UBERON:0001017!4.08e-24!82;UBERON:0005743!3.94e-23!86;UBERON:0002616!7.30e-22!59;UBERON:0000955!4.62e-21!69;UBERON:0006238!4.62e-21!69;UBERON:0003075!2.80e-19!86;UBERON:0007284!2.80e-19!86;UBERON:0003080!7.65e-18!42;UBERON:0002346!1.21e-17!90;UBERON:0002780!6.23e-17!41;UBERON:0001890!6.23e-17!41;UBERON:0006240!6.23e-17!41;UBERON:0002020!9.17e-16!34;UBERON:0003528!9.17e-16!34;UBERON:0001893!1.39e-15!34;UBERON:0002791!9.23e-15!33;UBERON:0003056!5.26e-14!61;UBERON:0001869!7.68e-14!32;UBERON:0004121!1.18e-12!169;UBERON:0002619!1.90e-12!22;UBERON:0001950!2.19e-12!20;UBERON:0000153!3.27e-12!129;UBERON:0007811!3.27e-12!129;UBERON:0000477!4.37e-12!286;UBERON:0000924!6.98e-12!173;UBERON:0006601!6.98e-12!173;UBERON:0004111!9.15e-12!241;UBERON:0000025!1.27e-11!194;UBERON:0000033!3.96e-11!123;UBERON:0000956!2.78e-10!25;UBERON:0000203!2.78e-10!25;UBERON:0002298!1.23e-09!8;UBERON:0003076!1.03e-07!15;UBERON:0003057!1.03e-07!15;UBERON:0002308!2.75e-07!9;UBERON:0000125!2.75e-07!9;UBERON:0002420!3.31e-07!9;UBERON:0007245!3.31e-07!9;UBERON:0010009!3.31e-07!9;UBERON:0010011!3.31e-07!9;UBERON:0000454!3.31e-07!9|ontology_enrichment_uberon_v019=UBERON:0001281;5.10e-13;2!UBERON:0003497;5.10e-13;2!UBERON:0003909;5.10e-13;2!UBERON:0003835;5.10e-13;2!UBERON:0002298;2.63e-09;6!UBERON:0002240;2.77e-09;3!UBERON:0005174;2.77e-09;3!UBERON:0001137;2.77e-09;3!UBERON:0001280;5.72e-09;3!UBERON:0004647;5.72e-09;3!UBERON:0001896;1.01e-08;3!UBERON:0005290;1.01e-08;3!UBERON:0002038;1.53e-07;1!UBERON:0009661;1.53e-07;1!UBERON:0002950;1.53e-07;1!UBERON:0001891;1.53e-07;1!UBERON:0004732;2.43e-07;13!UBERON:0001000;3.72e-07;1!UBERON:0000996;3.72e-07;1!UBERON:0000941;3.72e-07;1!UBERON:0002171;3.72e-07;1!UBERON:0001785;3.72e-07;1!UBERON:0002464;3.72e-07;1!UBERON:0004904;3.72e-07;1!UBERON:0001021;3.72e-07;1!UBERON:0006518;3.72e-07;1!UBERON:0008949;3.72e-07;1!UBERON:0000101;3.72e-07;1!UBERON:0005352;3.72e-07;1!UBERON:0002167;3.72e-07;1!UBERON:0002784;9.63e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001281,4.68e-13,2;UBERON:0003497,4.68e-13,2;UBERON:0003909,4.68e-13,2;UBERON:0003835,4.68e-13,2;UBERON:0001016,2.18e-11,89;UBERON:0007023,2.49e-11,114;UBERON:0001049,1.57e-10,56;UBERON:0005068,1.57e-10,56;UBERON:0006241,1.57e-10,56;UBERON:0007135,1.57e-10,56;UBERON:0003076,7.20e-10,15;UBERON:0003057,7.20e-10,15;UBERON:0001017,1.69e-09,81;UBERON:0003075,1.99e-09,82;UBERON:0007284,1.99e-09,82;UBERON:0002298,2.19e-09,6;UBERON:0002240,2.62e-09,3;UBERON:0005174,2.62e-09,3;UBERON:0001137,2.62e-09,3;UBERON:0001280,5.40e-09,3;UBERON:0004647,5.40e-09,3;UBERON:0005171,5.40e-09,3;UBERON:0002346,7.04e-09,86;UBERON:0001896,9.78e-09,3;UBERON:0005290,9.78e-09,3;UBERON:0010096,9.78e-09,3;UBERON:0002038,1.74e-07,1;UBERON:0009661,1.74e-07,1;UBERON:0002950,1.74e-07,1;UBERON:0001891,1.74e-07,1;UBERON:0009616,1.74e-07,1;UBERON:0010286,1.74e-07,1;UBERON:0004732,2.23e-07,13;UBERON:0000073,2.41e-07,53;UBERON:0002616,2.41e-07,53;UBERON:0004111,3.01e-07,240;UBERON:0000941,4.08e-07,1;UBERON:0001785,4.08e-07,1;UBERON:0002464,4.08e-07,1;UBERON:0004904,4.08e-07,1;UBERON:0001021,4.08e-07,1;UBERON:0003902,4.08e-07,1;UBERON:0005425,4.08e-07,1;UBERON:0000025,4.29e-07,192;UBERON:0000996,4.34e-07,1;UBERON:0002171,4.89e-07,1;UBERON:0006518,4.89e-07,1;UBERON:0008949,4.89e-07,1;UBERON:0000101,4.89e-07,1;UBERON:0002167,4.89e-07,1;UBERON:0001000,5.50e-07,1;UBERON:0005352,5.50e-07,1;UBERON:0010371,6.19e-07,104;UBERON:0002784,7.00e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0.3975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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |||
|TSSclassifier=S | |||
|UniProt=P15907 | |||
|association_with_transcript=-107bp_to_ENST00000169298_5end | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_12_at_ST6GAL1_5end | |||
|id=chr3:186648149..186648166,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.56e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002262;5.10e-13;2!CL:1000398;5.10e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,4.68e-13,2;CL:1000398,4.68e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.77e-09;3!UBERON:0003057;2.77e-09;3!UBERON:0004140;3.72e-07;1!UBERON:0005425;3.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.92e-42!115;UBERON:0001049!2.35e-24!57;UBERON:0005068!2.35e-24!57;UBERON:0006241!2.35e-24!57;UBERON:0007135!2.35e-24!57;UBERON:0000073!3.71e-24!94;UBERON:0001016!3.71e-24!94;UBERON:0001017!4.08e-24!82;UBERON:0005743!3.94e-23!86;UBERON:0002616!7.30e-22!59;UBERON:0000955!4.62e-21!69;UBERON:0006238!4.62e-21!69;UBERON:0003075!2.80e-19!86;UBERON:0007284!2.80e-19!86;UBERON:0003080!7.65e-18!42;UBERON:0002346!1.21e-17!90;UBERON:0002780!6.23e-17!41;UBERON:0001890!6.23e-17!41;UBERON:0006240!6.23e-17!41;UBERON:0002020!9.17e-16!34;UBERON:0003528!9.17e-16!34;UBERON:0001893!1.39e-15!34;UBERON:0002791!9.23e-15!33;UBERON:0003056!5.26e-14!61;UBERON:0001869!7.68e-14!32;UBERON:0004121!1.18e-12!169;UBERON:0002619!1.90e-12!22;UBERON:0001950!2.19e-12!20;UBERON:0000153!3.27e-12!129;UBERON:0007811!3.27e-12!129;UBERON:0000477!4.37e-12!286;UBERON:0000924!6.98e-12!173;UBERON:0006601!6.98e-12!173;UBERON:0004111!9.15e-12!241;UBERON:0000025!1.27e-11!194;UBERON:0000033!3.96e-11!123;UBERON:0000956!2.78e-10!25;UBERON:0000203!2.78e-10!25;UBERON:0002298!1.23e-09!8;UBERON:0003076!1.03e-07!15;UBERON:0003057!1.03e-07!15;UBERON:0002308!2.75e-07!9;UBERON:0000125!2.75e-07!9;UBERON:0002420!3.31e-07!9;UBERON:0007245!3.31e-07!9;UBERON:0010009!3.31e-07!9;UBERON:0010011!3.31e-07!9;UBERON:0000454!3.31e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.10e-13;2!UBERON:0003497;5.10e-13;2!UBERON:0003909;5.10e-13;2!UBERON:0003835;5.10e-13;2!UBERON:0002298;2.63e-09;6!UBERON:0002240;2.77e-09;3!UBERON:0005174;2.77e-09;3!UBERON:0001137;2.77e-09;3!UBERON:0001280;5.72e-09;3!UBERON:0004647;5.72e-09;3!UBERON:0001896;1.01e-08;3!UBERON:0005290;1.01e-08;3!UBERON:0002038;1.53e-07;1!UBERON:0009661;1.53e-07;1!UBERON:0002950;1.53e-07;1!UBERON:0001891;1.53e-07;1!UBERON:0004732;2.43e-07;13!UBERON:0001000;3.72e-07;1!UBERON:0000996;3.72e-07;1!UBERON:0000941;3.72e-07;1!UBERON:0002171;3.72e-07;1!UBERON:0001785;3.72e-07;1!UBERON:0002464;3.72e-07;1!UBERON:0004904;3.72e-07;1!UBERON:0001021;3.72e-07;1!UBERON:0006518;3.72e-07;1!UBERON:0008949;3.72e-07;1!UBERON:0000101;3.72e-07;1!UBERON:0005352;3.72e-07;1!UBERON:0002167;3.72e-07;1!UBERON:0002784;9.63e-07;4 | |||
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| |||
|short_description=p12@ST6GAL1 | |||
}} |
Revision as of 23:11, 12 September 2013
Short description: | p12@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ST6GAL1_5end |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | -107bp_to_ENST00000169298_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | P15907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 4.68e-13 | 2 |
endothelial cell of hepatic sinusoid | 4.68e-13 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.