FFCP PHASE1:Hg19::chr6:46293429..46293442,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10231|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3041|TSSclassifier=S|UniProt=Q14206|association_with_transcript=-24bp_to_ENST00000330430_5end|coexpression_cluster_id=C2861|description=CAGE_peak_8_at_RCAN2_5end|id=chr6:46293429..46293442,-|ontology_enrichment_celltype=CL:0000128!5.32e-07!7;CL:0000126!5.32e-07!7;CL:0000127!5.32e-07!7;CL:0002453!5.32e-07!7|ontology_enrichment_celltype_v019=CL:0000064;5.32e-08;3!CL:0000067;5.32e-08;3!CL:0005012;5.32e-08;3!CL:0002304;5.32e-08;3!CL:0000128;4.61e-07;7!CL:0000126;4.61e-07;7!CL:0000127;4.61e-07;7|ontology_enrichment_celltype_v019_2=CL:0000064,5.10e-08,3;CL:0000067,5.10e-08,3;CL:0005012,5.10e-08,3;CL:0002304,5.10e-08,3;CL:0000128,5.09e-07,7;CL:0000126,5.09e-07,7;CL:0000127,5.09e-07,7;CL:0002453,5.09e-07,7|ontology_enrichment_development_v019=UBERON:0006601;7.68e-13;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.04e-48!57;UBERON:0005068!6.04e-48!57;UBERON:0006241!6.04e-48!57;UBERON:0007135!6.04e-48!57;UBERON:0001017!1.83e-45!82;UBERON:0005743!4.26e-45!86;UBERON:0002616!2.11e-44!59;UBERON:0000955!9.59e-43!69;UBERON:0006238!9.59e-43!69;UBERON:0003075!5.55e-42!86;UBERON:0007284!5.55e-42!86;UBERON:0000073!2.78e-41!94;UBERON:0001016!2.78e-41!94;UBERON:0002346!5.66e-39!90;UBERON:0002780!2.19e-37!41;UBERON:0001890!2.19e-37!41;UBERON:0006240!2.19e-37!41;UBERON:0003080!4.07e-36!42;UBERON:0003056!4.13e-34!61;UBERON:0001893!3.66e-33!34;UBERON:0002020!3.82e-33!34;UBERON:0003528!3.82e-33!34;UBERON:0002791!5.59e-32!33;UBERON:0001869!2.16e-31!32;UBERON:0000153!1.76e-25!129;UBERON:0007811!1.76e-25!129;UBERON:0000033!1.52e-24!123;UBERON:0000956!1.53e-24!25;UBERON:0000203!1.53e-24!25;UBERON:0007023!3.07e-23!115;UBERON:0002619!3.16e-22!22;UBERON:0001950!2.68e-20!20;UBERON:0004121!5.90e-20!169;UBERON:0000924!6.78e-19!173;UBERON:0006601!6.78e-19!173;UBERON:0003076!1.36e-12!15;UBERON:0003057!1.36e-12!15;UBERON:0004732!8.93e-11!13;UBERON:0004733!5.48e-10!12;UBERON:0002028!5.48e-10!12;UBERON:0007277!5.48e-10!12;UBERON:0002308!5.64e-10!9;UBERON:0000125!5.64e-10!9;UBERON:0002420!8.83e-10!9;UBERON:0007245!8.83e-10!9;UBERON:0010009!8.83e-10!9;UBERON:0010011!8.83e-10!9;UBERON:0000454!8.83e-10!9;UBERON:0000475!1.51e-08!365;UBERON:0000200!4.47e-08!6;UBERON:0009663!6.26e-08!7;UBERON:0000025!1.82e-07!194;UBERON:0000483!2.64e-07!309;UBERON:0002680!2.84e-07!9;UBERON:0001895!2.84e-07!9;UBERON:0010092!2.84e-07!9;UBERON:0002298!4.84e-07!8;UBERON:0000119!5.17e-07!312;UBERON:0001872!6.47e-07!5;UBERON:0002021!9.23e-07!5|ontology_enrichment_uberon_v019=UBERON:0003528;1.60e-47;34!UBERON:0002020;1.60e-47;34!UBERON:0001893;3.25e-47;34!UBERON:0001869;7.97e-47;32!UBERON:0002791;3.18e-46;32!UBERON:0002780;2.64e-42;41!UBERON:0001890;2.64e-42;41!UBERON:0000073;7.50e-42;53!UBERON:0002616;7.50e-42;53!UBERON:0000956;1.08e-39;25!UBERON:0000203;1.08e-39;25!UBERON:0002619;2.37e-38;22!UBERON:0001950;1.15e-34;20!UBERON:0001017;6.33e-29;75!UBERON:0000955;1.56e-28;68!UBERON:0001016;1.40e-23;83!UBERON:0000125;2.39e-17;9!UBERON:0002308;2.39e-17;9!UBERON:0002420;7.42e-17;9!UBERON:0007245;7.42e-17;9!UBERON:0010009;7.42e-17;9!UBERON:0010011;7.42e-17;9!UBERON:0000454;7.42e-17;9!UBERON:0004732;2.11e-14;13!UBERON:0000200;7.49e-14;6!UBERON:0009663;1.72e-13;7!UBERON:0004733;5.59e-13;12!UBERON:0002028;5.59e-13;12!UBERON:0002298;6.75e-13;6!UBERON:0001872;8.22e-12;5!UBERON:0002021;2.67e-11;5!UBERON:0000349;1.22e-10;5!UBERON:0000488;5.18e-10;4!UBERON:0007023;9.84e-10;114!UBERON:0002784;3.22e-09;4!UBERON:0010314;8.02e-09;132!UBERON:0000369;1.02e-08;4!UBERON:0002435;1.02e-08;4!UBERON:0000204;1.02e-08;4!UBERON:0002680;3.43e-08;9!UBERON:0001895;3.43e-08;9!UBERON:0001778;5.32e-08;3!UBERON:0001775;5.32e-08;3!UBERON:0011216;7.41e-08;132!UBERON:0001870;7.45e-08;3!UBERON:0001894;8.32e-08;7!UBERON:0000988;1.21e-07;3!UBERON:0001871;1.25e-07;6!UBERON:0007625;5.88e-07;11!UBERON:0001896;6.39e-07;3!UBERON:0005290;6.39e-07;3!UBERON:0005383;9.53e-07;3!UBERON:0005382;9.53e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.19e-79,56;UBERON:0005068,1.19e-79,56;UBERON:0006241,1.19e-79,56;UBERON:0007135,1.19e-79,56;UBERON:0000073,2.58e-74,53;UBERON:0002616,2.58e-74,53;UBERON:0003075,4.12e-71,82;UBERON:0007284,4.12e-71,82;UBERON:0001017,5.20e-71,81;UBERON:0002346,4.65e-67,86;UBERON:0000955,1.39e-65,68;UBERON:0006238,1.39e-65,68;UBERON:0001016,9.21e-65,89;UBERON:0002780,2.83e-62,41;UBERON:0001890,2.83e-62,41;UBERON:0003080,2.83e-62,41;UBERON:0006240,2.83e-62,41;UBERON:0003056,4.88e-60,61;UBERON:0001893,4.12e-56,34;UBERON:0003528,4.46e-56,34;UBERON:0002020,4.46e-56,34;UBERON:0010371,1.12e-54,104;UBERON:0001869,9.82e-53,32;UBERON:0002791,4.39e-52,32;UBERON:0010314,5.00e-43,132;UBERON:0000956,9.03e-40,25;UBERON:0000203,9.03e-40,25;UBERON:0002619,1.45e-38,22;UBERON:0004121,1.95e-37,171;UBERON:0000924,1.95e-37,171;UBERON:0006601,1.95e-37,171;UBERON:0001950,6.77e-35,20;UBERON:0007023,1.60e-32,11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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3041 | |||
|TSSclassifier=S | |||
|UniProt=Q14206 | |||
|association_with_transcript=-24bp_to_ENST00000330430_5end | |||
|coexpression_cluster_id=C2861 | |||
|description=CAGE_peak_8_at_RCAN2_5end | |||
|id=chr6:46293429..46293442,- | |||
|ontology_enrichment_celltype=CL:0000128!5.32e-07!7;CL:0000126!5.32e-07!7;CL:0000127!5.32e-07!7;CL:0002453!5.32e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000064;5.32e-08;3!CL:0000067;5.32e-08;3!CL:0005012;5.32e-08;3!CL:0002304;5.32e-08;3!CL:0000128;4.61e-07;7!CL:0000126;4.61e-07;7!CL:0000127;4.61e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.10e-08,3;CL:0000067,5.10e-08,3;CL:0005012,5.10e-08,3;CL:0002304,5.10e-08,3;CL:0000128,5.09e-07,7;CL:0000126,5.09e-07,7;CL:0000127,5.09e-07,7;CL:0002453,5.09e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.68e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p8@RCAN2 | |||
}} |
Revision as of 21:15, 13 September 2013
Short description: | p8@RCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RCAN2_5end |
Coexpression cluster: | C2861_Ciliary_anaplastic_paracentral_pons_parietal_postcentral_medial |
Association with transcript: | -24bp_to_ENST00000330430_5end |
EntrezGene: | RCAN2 |
HGNC: | 3041 |
UniProt: | Q14206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.10e-08 | 3 |
ciliated epithelial cell | 5.10e-08 | 3 |
multi-ciliated epithelial cell | 5.10e-08 | 3 |
non-pigmented ciliary epithelial cell | 5.10e-08 | 3 |
oligodendrocyte | 5.09e-07 | 7 |
macroglial cell | 5.09e-07 | 7 |
astrocyte | 5.09e-07 | 7 |
oligodendrocyte precursor cell | 5.09e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.