FFCP PHASE1:Hg19::chr17:9939908..9939926,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |||
|TSSclassifier=strong | |||
|UniProt=A8KAC2 | |||
|association_with_transcript=-30bp_to_ENST00000537970_5end | |||
|coexpression_cluster_id=C1660 | |||
|description=CAGE_peak_8_at_GAS7_5end | |||
|id=chr17:9939908..9939926,- | |||
|ontology_enrichment_celltype=CL:0002057!3.84e-39!42;CL:0000860!2.76e-35!45;CL:0000766!5.57e-30!76;CL:0002194!5.66e-28!63;CL:0000576!5.66e-28!63;CL:0000040!5.66e-28!63;CL:0000559!5.66e-28!63;CL:0002009!1.58e-26!65;CL:0000839!3.52e-24!70;CL:0000557!1.42e-23!71;CL:0000763!5.75e-16!112;CL:0000049!5.75e-16!112;CL:0000738!9.91e-16!140;CL:0002087!2.24e-14!119;CL:0002031!2.10e-11!124;CL:0000037!5.80e-10!172;CL:0000566!5.80e-10!172;CL:0002032!3.88e-09!165;CL:0000837!3.88e-09!165;CL:0000988!1.03e-08!182;CL:0002393!2.30e-07!9;CL:0002397!2.30e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.82e-37;33!CL:0002057;1.82e-37;33!CL:0000473;2.39e-28;39!CL:0000234;2.39e-28;39!CL:0000576;3.24e-25;48!CL:0000766;1.27e-17;69!CL:0000763;2.81e-07;100!CL:0000094;4.45e-07;8!CL:0002393;4.94e-07;6!CL:0002397;4.94e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-48,42;CL:0002057,1.64e-48,42;CL:0000473,3.15e-44,48;CL:0000234,3.15e-44,48;CL:0000766,4.99e-34,72;CL:0002194,4.79e-32,59;CL:0000576,4.79e-32,59;CL:0000040,4.79e-32,59;CL:0000559,4.79e-32,59;CL:0002009,1.73e-30,61;CL:0000839,5.12e-27,66;CL:0000557,2.18e-26,67;CL:0000763,7.73e-19,108;CL:0000049,7.73e-19,108;CL:0000738,5.13e-13,136;CL:0002087,2.57e-12,115;CL:0002031,3.18e-09,120;CL:0002393,8.33e-09,9;CL:0002397,8.33e-09,9;CL:0000037,1.05e-08,168;CL:0002032,4.40e-08,161;CL:0000837,4.40e-08,161;CL:0000988,1.54e-07,177;CL:0000094,4.18e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.56e-35;42!UBERON:0006601;4.74e-09;82!CL:0000049;6.41e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.67e-66!115;UBERON:0001049!1.47e-28!57;UBERON:0005068!1.47e-28!57;UBERON:0006241!1.47e-28!57;UBERON:0007135!1.47e-28!57;UBERON:0002390!8.13e-24!102;UBERON:0003061!8.13e-24!102;UBERON:0002616!2.12e-22!59;UBERON:0002193!6.13e-22!112;UBERON:0002780!9.39e-21!41;UBERON:0001890!9.39e-21!41;UBERON:0006240!9.39e-21!41;UBERON:0003080!5.84e-20!42;UBERON:0003075!6.14e-19!86;UBERON:0007284!6.14e-19!86;UBERON:0002371!7.39e-19!80;UBERON:0000955!1.20e-18!69;UBERON:0006238!1.20e-18!69;UBERON:0001017!4.86e-18!82;UBERON:0005743!2.36e-17!86;UBERON:0002020!2.38e-17!34;UBERON:0003528!2.38e-17!34;UBERON:0001474!2.65e-17!86;UBERON:0002346!2.84e-17!90;UBERON:0001893!3.09e-17!34;UBERON:0002791!1.54e-16!33;UBERON:0001869!2.45e-15!32;UBERON:0000073!4.26e-15!94;UBERON:0001016!4.26e-15!94;UBERON:0004765!1.56e-13!101;UBERON:0001434!1.56e-13!101;UBERON:0002619!1.04e-12!22;UBERON:0002405!2.16e-12!115;UBERON:0001950!1.98e-11!20;UBERON:0003056!5.75e-11!61;UBERON:0000062!1.14e-10!511;UBERON:0000956!1.88e-10!25;UBERON:0000203!1.88e-10!25;UBERON:0003076!8.51e-10!15;UBERON:0003057!8.51e-10!15;UBERON:0002308!4.21e-09!9;UBERON:0000125!4.21e-09!9;UBERON:0002420!2.64e-08!9;UBERON:0007245!2.64e-08!9;UBERON:0010009!2.64e-08!9;UBERON:0010011!2.64e-08!9;UBERON:0000454!2.64e-08!9;UBERON:0004732!2.68e-08!13;UBERON:0003081!9.52e-08!216;UBERON:0000153!1.42e-07!129;UBERON:0007811!1.42e-07!129;UBERON:0000033!2.36e-07!123;UBERON:0004733!2.61e-07!12;UBERON:0002028!2.61e-07!12;UBERON:0007277!2.61e-07!12;UBERON:0009663!3.41e-07!7;UBERON:0002298!5.66e-07!8;UBERON:0000922!6.51e-07!612;UBERON:0000467!6.80e-07!625;UBERON:0002050!6.96e-07!605;UBERON:0005423!6.96e-07!605;UBERON:0000178!7.33e-07!15;UBERON:0000179!7.33e-07!15;UBERON:0000463!7.33e-07!15;UBERON:0000480!8.26e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.37e-18;34!UBERON:0003528;2.93e-18;34!UBERON:0002020;2.93e-18;34!UBERON:0002780;6.15e-18;41!UBERON:0001890;6.15e-18;41!UBERON:0002791;1.36e-17;32!UBERON:0000073;1.60e-17;53!UBERON:0002616;1.60e-17;53!UBERON:0001869;2.26e-17;32!UBERON:0007023;3.40e-16;114!UBERON:0002619;1.01e-15;22!UBERON:0001950;4.23e-14;20!UBERON:0000956;3.40e-13;25!UBERON:0000203;3.40e-13;25!UBERON:0000125;5.49e-11;9!UBERON:0002308;5.49e-11;9!UBERON:0000955;1.15e-10;68!UBERON:0001017;3.90e-10;75!UBERON:0002420;6.44e-10;9!UBERON:0007245;6.44e-10;9!UBERON:0010009;6.44e-10;9!UBERON:0010011;6.44e-10;9!UBERON:0000454;6.44e-10;9!UBERON:0004732;4.65e-09;13!UBERON:0001016;1.15e-08;83!UBERON:0002298;1.31e-08;6!UBERON:0009663;1.32e-08;7!UBERON:0000178;1.44e-08;15!UBERON:0000179;1.44e-08;15!UBERON:0000463;1.44e-08;15!UBERON:0004733;7.27e-08;12!UBERON:0002028;7.27e-08;12!UBERON:0000200;6.26e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.91e-65,114;UBERON:0001049,5.33e-35,56;UBERON:0005068,5.33e-35,56;UBERON:0006241,5.33e-35,56;UBERON:0007135,5.33e-35,56;UBERON:0000073,8.18e-32,53;UBERON:0002616,8.18e-32,53;UBERON:0002390,2.15e-26,98;UBERON:0003061,2.15e-26,98;UBERON:0003075,1.18e-25,82;UBERON:0007284,1.18e-25,82;UBERON:0002780,3.62e-25,41;UBERON:0001890,3.62e-25,41;UBERON:0003080,3.62e-25,41;UBERON:0006240,3.62e-25,41;UBERON:0000955,6.90e-24,68;UBERON:0006238,6.90e-24,68;UBERON:0002346,1.11e-23,86;UBERON:0002193,3.28e-23,108;UBERON:0001017,9.71e-23,81;UBERON:0003528,5.13e-22,34;UBERON:0002020,5.13e-22,34;UBERON:0001893,7.17e-22,34;UBERON:0002371,1.72e-21,76;UBERON:0001016,3.10e-20,89;UBERON:0001474,5.36e-20,82;UBERON:0002791,8.29e-20,32;UBERON:0001869,1.79e-19,32;UBERON:0010371,6.12e-19,104;UBERON:0004765,6.37e-17,90;UBERON:0002405,1.24e-16,93;UBERON:0003056,7.41e-16,61;UBERON:0002619,7.42e-16,22;UBERON:0010314,1.52e-15,132;UBERON:0001434,1.08e-14,100;UBERON:0001950,2.99e-14,20;UBERON:0000956,2.60e-13,25;UBERON:0000203,2.60e-13,25;UBERON:0000923,1.34e-11,560;UBERON:0010316,1.34e-11,560;UBERON:0005291,1.34e-11,560;UBERON:0006598,1.34e-11,560;UBERON:0010317,1.34e-11,560;UBERON:0002532,1.34e-11,560;UBERON:0002050,3.03e-11,564;UBERON:0000125,5.73e-11,9;UBERON:0002308,5.73e-11,9;UBERON:0003076,7.50e-11,15;UBERON:0003057,7.50e-11,15;UBERON:0003081,1.27e-10,203;UBERON:0002420,5.63e-10,9;UBERON:0007245,5.63e-10,9;UBERON:0010009,5.63e-10,9;UBERON:0010011,5.63e-10,9;UBERON:0000454,5.63e-10,9;UBERON:0005423,8.37e-10,581;UBERON:0000922,2.60e-09,592;UBERON:0004732,5.13e-09,13;UBERON:0009663,1.36e-08,7;UBERON:0002298,1.40e-08,6;UBERON:0000178,1.63e-08,15;UBERON:0000179,1.63e-08,15;UBERON:0000463,1.63e-08,15;UBERON:0004121,7.02e-08,171;UBERON:0000924,7.02e-08,171;UBERON:0006601,7.02e-08,171;UBERON:0004733,8.00e-08,12;UBERON:0002028,8.00e-08,12;UBERON:0007277,8.00e-08,12;UBERON:0000200,4.51e-07,6;UBERON:0011216,8.48e-07,223 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,5.11373559903575,4.98978217526377,6.34746105595912,0,0,0,0,0,0,9.41792194504192,13.8375668754398,9.33146744078163,0.223915474239924,0.647787332037959,0.257575567634187,11.9226555799243,8.69114670484262,10.1885305698883,16.0376035464922,7.81218987241469,8.981484755958,31.0707783707923,23.8229457072064,18.9185783910868,13.4450815487281,19.3645405075148,13.5426486594342,10.9180556934711,5.45812300115692,3.59557575112135,12.8555234795779,7.06043859567406,8.95071976118658,47.1687359267004,27.9249120670285,23.0161365287655,11.0279510678862,7.94339314567596,12.4564449799115,21.3561365468232,18.251902144707,13.4657083717172,21.7943820948013,12.5214396235772,8.86094684834476,1.26753171787165,2.76385589954557,3.77385561915077,11.0082058523565,14.7173354984676,16.5547354297993,1.42506371870624,1.59133341759272,2.00930569141097,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.255973222308837,1.24930726552346,0.473554504088034,0,0,0.267440195783507,0,0,4.02420515822182,0.383587685530591,0,0,0,0,7.78615792484217,0,0,0,1.24430121722827,0,0,0,0,0,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,2.48968828319813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,1.18904929830983,0,0,0,0,0,0,0,0,0,0.144119953416961,0,1.58744735730423,5.34783795781589,3.51652341630141,3.4214489204541,3.39330725920968,2.70308752059526,3.71574362419752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51579964002488,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,6.74106321552464,8.97484377612075,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,7.23688091430106,7.11856862701436,2.24127871387233,0,0,0,0,0.153461973288062,0,0.768834895534206,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,1.03558180854457,0,0,0,0,2.02979043692868,3.82318603571188,5.69647187174163,2.62054953003568,3.70226045777575,4.53931317834902,3.24018862342869,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.93113896364988,0,0,0,1.36771666781428,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0.890894042497916,0,1.9882952955326,3.65740482667333,0,0,0,1.9924798825107,3.86797481743607,0,0,0,0,0,0,0,2.95930216910801,2.3948309234694,0,3.87733098438087,11.874316564717,0,0,0,0,0,0,0,0,0,0,3.54296554325536,2.41192877250816,4.5774520895125,4.09143261745531,5.02430952221031,0.87754158861589,0,0,1.69290568708354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.59223616106011,3.05515072466813,0,0,0,22.0401704846814,0,12.416015623443,0,0,0,1.57833761139756,2.41981432097328,0,5.68679216656392,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,3.9765496760252,5.29536760149002,0.90392296312213,0,0,4.05189094117624,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,20.4142898161328,20.9465229704749,0,0,0,10.6127312483457,3.66656678418694,25.1255558601885,2.1964690054889,4.29226048136571,4.9097720637212,1.88113722962834,0,0,0,0,0,0,0,2.38568906942791,5.44813624446302,0,0,0,0,0,3.21972650287531,0,0.0788057072991982,0.209818352539992,0,0,0,2.85878130549347,2.64836788146173,0,0,0,0,0,0,0,0,0,1.32506888912221,14.2211251997706,11.3720037498713,0,0,1.06787412567695,0.78602152549833,0.414239055347196,2.48083010905975,0,0,0,0.544017803369474,0,0.306345576763462,0.983617892129413,0,1.77213635993397,3.90484047686282,7.88702863450949,9.17454713104114,12.5349828236643,12.4813769912181,0,0,18.6528414576227,6.85116800507922,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67809053062115,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0741087826203,1.41696576325585,11.9725394292863,6.76884001994492,0,5.39426569220899,4.52131807769183,44.2585202803379,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,4.38994300019565,7.81078098613847,6.82066428453907,5.70742291745161,0,1.09651553371436,2.97726707033577,0,0,4.82131652290458,2.69026977775059,0,0.227662191351298,0.266107110487916,0,0,8.15636795721981,5.72223129996787,0,0,1.0989032999072,2.82808061848803,0,2.73947616152849,0,0,4.00268647389276,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,1.29485767437579,0.821302454849976,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.848915739187391,0.655678681511872,0,2.45148321753905,0,16.8825281718853,17.5257376192981,3.3812458206672,0,1.6917105236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| |||
|short_description=p8@GAS7 | |||
}} |
Revision as of 13:54, 20 January 2014
Short description: | p8@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GAS7_5end |
Coexpression cluster: | C1660_CD14_substantia_corpus_globus_thalamus_optic_spinal |
Association with transcript: | -30bp_to_ENST00000537970_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | A8KAC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-48 | 42 |
defensive cell | 3.15e-44 | 48 |
phagocyte | 3.15e-44 | 48 |
myeloid leukocyte | 4.99e-34 | 72 |
monopoietic cell | 4.79e-32 | 59 |
monocyte | 4.79e-32 | 59 |
monoblast | 4.79e-32 | 59 |
promonocyte | 4.79e-32 | 59 |
macrophage dendritic cell progenitor | 1.73e-30 | 61 |
myeloid lineage restricted progenitor cell | 5.12e-27 | 66 |
granulocyte monocyte progenitor cell | 2.18e-26 | 67 |
myeloid cell | 7.73e-19 | 108 |
common myeloid progenitor | 7.73e-19 | 108 |
leukocyte | 5.13e-13 | 136 |
nongranular leukocyte | 2.57e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 3.18e-09 | 120 |
intermediate monocyte | 8.33e-09 | 9 |
CD14-positive, CD16-positive monocyte | 8.33e-09 | 9 |
hematopoietic stem cell | 1.05e-08 | 168 |
hematopoietic oligopotent progenitor cell | 4.40e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-08 | 161 |
hematopoietic cell | 1.54e-07 | 177 |
granulocyte | 4.18e-07 | 8 |