FFCP PHASE1:Hg19::chr3:180397256..180397301,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25244 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UFE4 | |||
|association_with_transcript=0bp_to_ENST00000442201,NM_181426,uc010hxe.2_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_CCDC39_5end | |||
|id=chr3:180397256..180397301,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.64e-13;82!UBERON:0010122;8.29e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.36e-41!82;UBERON:0005743!6.31e-40!86;UBERON:0001049!3.29e-38!57;UBERON:0005068!3.29e-38!57;UBERON:0006241!3.29e-38!57;UBERON:0007135!3.29e-38!57;UBERON:0000073!1.46e-34!94;UBERON:0001016!1.46e-34!94;UBERON:0002780!5.56e-33!41;UBERON:0001890!5.56e-33!41;UBERON:0006240!5.56e-33!41;UBERON:0002616!1.64e-32!59;UBERON:0003080!5.92e-32!42;UBERON:0000955!1.24e-31!69;UBERON:0006238!1.24e-31!69;UBERON:0007023!1.65e-31!115;UBERON:0003075!1.22e-27!86;UBERON:0007284!1.22e-27!86;UBERON:0002346!9.21e-26!90;UBERON:0002020!1.90e-23!34;UBERON:0003528!1.90e-23!34;UBERON:0001893!3.57e-23!34;UBERON:0001869!9.23e-23!32;UBERON:0002791!4.97e-22!33;UBERON:0003056!8.00e-22!61;UBERON:0002619!1.40e-18!22;UBERON:0000153!3.56e-17!129;UBERON:0007811!3.56e-17!129;UBERON:0000033!1.48e-16!123;UBERON:0001950!4.95e-16!20;UBERON:0000956!8.57e-16!25;UBERON:0000203!8.57e-16!25;UBERON:0004121!3.18e-15!169;UBERON:0000924!1.66e-14!173;UBERON:0006601!1.66e-14!173;UBERON:0001894!2.39e-12!7;UBERON:0006222!2.39e-12!7;UBERON:0000025!8.39e-10!194;UBERON:0002308!2.46e-09!9;UBERON:0000125!2.46e-09!9;UBERON:0001871!3.45e-09!7;UBERON:0002420!4.08e-09!9;UBERON:0007245!4.08e-09!9;UBERON:0010009!4.08e-09!9;UBERON:0010011!4.08e-09!9;UBERON:0000454!4.08e-09!9;UBERON:0000349!1.11e-08!5;UBERON:0003296!4.71e-08!4;UBERON:0010133!4.71e-08!4;UBERON:0000369!5.40e-08!4;UBERON:0002435!5.40e-08!4;UBERON:0000204!5.40e-08!4;UBERON:0010082!5.40e-08!4;UBERON:0002298!8.12e-08!8;UBERON:0003076!1.12e-07!15;UBERON:0003057!1.12e-07!15;UBERON:0004111!2.09e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.81e-26;41!UBERON:0001890;1.81e-26;41!UBERON:0000073;8.75e-26;53!UBERON:0002616;8.75e-26;53!UBERON:0000125;6.05e-22;9!UBERON:0002308;6.05e-22;9!UBERON:0001894;5.33e-21;7!UBERON:0003528;6.72e-21;34!UBERON:0002020;6.72e-21;34!UBERON:0001893;3.50e-20;34!UBERON:0002791;8.23e-20;32!UBERON:0001869;3.65e-19;32!UBERON:0001017;8.47e-18;75!UBERON:0002298;1.81e-17;6!UBERON:0003296;1.93e-17;4!UBERON:0010133;1.93e-17;4!UBERON:0000369;2.09e-17;4!UBERON:0002435;2.09e-17;4!UBERON:0000204;2.09e-17;4!UBERON:0002420;3.60e-16;9!UBERON:0007245;3.60e-16;9!UBERON:0010009;3.60e-16;9!UBERON:0010011;3.60e-16;9!UBERON:0000454;3.60e-16;9!UBERON:0000955;5.88e-16;68!UBERON:0009663;8.17e-15;7!UBERON:0007023;7.93e-14;114!UBERON:0005383;1.10e-13;3!UBERON:0005382;1.10e-13;3!UBERON:0000988;7.53e-13;3!UBERON:0002619;3.34e-12;22!UBERON:0001016;3.81e-11;83!UBERON:0001950;1.02e-10;20!UBERON:0000956;1.29e-10;25!UBERON:0000203;1.29e-10;25!UBERON:0002784;3.04e-10;4!UBERON:0001873;8.29e-10;2!UBERON:0001905;8.84e-10;2!UBERON:0002757;8.84e-10;2!UBERON:0010134;8.84e-10;2!UBERON:0005408;8.84e-10;2!UBERON:0001899;8.84e-10;2!UBERON:0003127;1.38e-09;2!UBERON:0000007;2.19e-09;2!UBERON:0002148;2.19e-09;2!UBERON:0006331;2.19e-09;2!UBERON:0009662;2.19e-09;2!UBERON:0000341;6.62e-09;2!UBERON:0004733;1.41e-08;12!UBERON:0002028;1.41e-08;12!UBERON:0004732;6.84e-08;13!UBERON:0000349;9.11e-08;5!UBERON:0002021;9.33e-08;5!UBERON:0001896;7.27e-07;3!UBERON:0005290;7.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.75e-45,56;UBERON:0005068,1.75e-45,56;UBERON:0006241,1.75e-45,56;UBERON:0007135,1.75e-45,56;UBERON:0000073,1.30e-44,53;UBERON:0002616,1.30e-44,53;UBERON:0001017,1.60e-39,81;UBERON:0007023,9.97e-39,114;UBERON:0002780,2.90e-37,41;UBERON:0001890,2.90e-37,41;UBERON:0003080,2.90e-37,41;UBERON:0006240,2.90e-37,41;UBERON:0000955,9.15e-36,68;UBERON:0006238,9.15e-36,68;UBERON:0001016,6.31e-35,89;UBERON:0003075,1.67e-31,82;UBERON:0007284,1.67e-31,82;UBERON:0002346,9.68e-30,86;UBERON:0003056,5.51e-26,61;UBERON:0003528,1.67e-25,34;UBERON:0002020,1.67e-25,34;UBERON:0010371,2.12e-25,104;UBERON:0001893,4.09e-22,34;UBERON:0000125,8.58e-22,9;UBERON:0002308,8.58e-22,9;UBERON:0001894,3.64e-21,7;UBERON:0006222,3.64e-21,7;UBERON:0002791,1.80e-20,32;UBERON:0001869,1.80e-20,32;UBERON:0004121,1.72e-17,171;UBERON:0000924,1.72e-17,171;UBERON:0006601,1.72e-17,171;UBERON:0003296,1.81e-17,4;UBERON:0010133,1.81e-17,4;UBERON:0002298,1.87e-17,6;UBERON:0000369,2.53e-17,4;UBERON:0002435,2.53e-17,4;UBERON:0000204,2.53e-17,4;UBERON:0010082,2.53e-17,4;UBERON:0010314,4.04e-17,132;UBERON:0002420,4.02e-16,9;UBERON:0007245,4.02e-16,9;UBERON:0010009,4.02e-16,9;UBERON:0010011,4.02e-16,9;UBERON:0000454,4.02e-16,9;UBERON:0011216,4.10e-15,223;UBERON:0009663,1.08e-14,7;UBERON:0000025,3.52e-14,192;UBERON:0005383,1.10e-13,3;UBERON:0005382,1.10e-13,3;UBERON:0000988,7.70e-13,3;UBERON:0002619,3.57e-12,22;UBERON:0004111,8.47e-11,240;UBERON:0001950,1.16e-10,20;UBERON:0000956,1.37e-10,25;UBERON:0000203,1.37e-10,25;UBERON:0002784,2.73e-10,4;UBERON:0001905,8.48e-10,2;UBERON:0001873,8.48e-10,2;UBERON:0002757,8.48e-10,2;UBERON:0010134,8.48e-10,2;UBERON:0005408,8.48e-10,2;UBERON:0001899,8.48e-10,2;UBERON:0010122,8.48e-10,2;UBERON:0003127,1.14e-09,2;UBERON:0003076,1.77e-09,15;UBERON:0003057,1.77e-09,15;UBERON:0000007,2.15e-09,2;UBERON:0002148,2.33e-09,2;UBERON:0006331,2.33e-09,2;UBERON:0009662,2.33e-09,2;UBERON:0000341,3.99e-09,2;UBERON:0004733,1.43e-08,12;UBERON:0002028,1.43e-08,12;UBERON:0007277,1.43e-08,12;UBERON:0004732,6.95e-08,13;UBERON:0000349,7.91e-08,5;UBERON:0002021,1.00e-07,5;UBERON:0000483,1.58e-07,306;UBERON:0000119,2.20e-07,309;UBERON:0001896,7.38e-07,3;UBERON:0005290,7.38e-07,3;UBERON:0010096,7.38e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.348581828608555,0.207322110030741,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,2.98244294329889,0.703347082052564,0,0,0,1.39473591775749,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,1.85536196323703,0,0,0,0,0,0,0,0,0,0,10.6288966297661,5.30624329951795,0,0.221158519862449,0,3.51016635446356,0,0,0.384751292518985,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0.865554558968364,0,0,0,0.296521128680622,0.123563938946503,0,2.02203398942031,0,1.63985112007737,0,0,0,0,0,0.61214552326098,0.126373159256976,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,8.56160674385948,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.823040347426423,0.586654148204409,0,0,0.39961921916426,0.432271251462318,0.114536596165916,0.514784993585894,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0,0,1.20084057741958,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,1.49823746722733,0.643012593860077,1.2378549293751,1.24632101408756,0,0,0.971992906528395,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,4.52490347265427,2.38018683136842,0,0,5.01900839068165,28.1395706128402,3.72815149812476,0,2.37133958277533,0,0,0,0,0.306345576763462,0,1.57054096250234,0,1.34228891392159,1.001527445652,22.9363678276028,7.09945929835855,0.931446044120752,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0553352030867,5.6678630530234,1.11743701340006,1.43581454968528,0,0,0.807378228159255,0,0,0,0,0,0,0.690359926060101,0,3.08362346231955,0,0,0,0.163771917510097,0.443568258651136,0.607838261565552,0,1.44680757550829,0.380494861163441,1.09394961803644,0,0,0,0,4.82131652290458,11.0973628332212,2.42786241694653,4.55324382702595,0,0.115233987555779,0,1.42736439251347,0.131545547125698,0.118193840883968,0.111231401892069,0,3.61365856806804,0,0,0,0,1.00067161847319,0.47404083519818,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0.11294608203896,0.109940516745429,0.603851374266694,0,0,0,0,0.235676547101626,0.196308467114945,0,2.113278637917,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0.437062287854782,0,0.101988829741982,0.26721740526556,0.18378979906969,0,10.9121325434265,7.502995644373,2.48750831837634,0.930896962757057,1.91910583710883,2.61870874610114,0,0,0,0.190941474834495,0,0,0,0.0673520530145875,13.7706634353939,2.66128285236811,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CCDC39 | |||
}} |
Revision as of 22:47, 21 January 2014
Short description: | p2@CCDC39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC39_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000442201, NM_181426, uc010hxe.2_5end |
EntrezGene: | CCDC39 |
HGNC: | 25244 |
UniProt: | Q9UFE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data