FF:11234-116D1: Difference between revisions

Revision as of 17:42, 29 June 2012

Name:	Smooth Muscle Cells - Brain Vascular, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	brain
dev stage	fetus
sex	unknown
age	fetal
cell type	smooth muscle cell
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	2733
catalog number	SC1105
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.148
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.182
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0136
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0696
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.318
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.202
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.072
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0209
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0524
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0423
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.071
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.396
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.242
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.137
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.242
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.326
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.396
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10863

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.209
MA0003.1	MA0003.1	0.49
MA0004.1	MA0004.1	0.544
MA0006.1	MA0006.1	0.123
MA0007.1	MA0007.1	0.531
MA0009.1	MA0009.1	0.174
MA0014.1	MA0014.1	0.469
MA0017.1	MA0017.1	0.524
MA0018.2	MA0018.2	0.0034
MA0019.1	MA0019.1	0.485
MA0024.1	MA0024.1	0.0863
MA0025.1	MA0025.1	1.0718e-4
MA0027.1	MA0027.1	0.705
MA0028.1	MA0028.1	0.0725
MA0029.1	MA0029.1	0.548
MA0030.1	MA0030.1	0.0178
MA0031.1	MA0031.1	0.00508
MA0035.2	MA0035.2	0.0417
MA0038.1	MA0038.1	0.00369
MA0039.2	MA0039.2	0.162
MA0040.1	MA0040.1	0.807
MA0041.1	MA0041.1	0.96
MA0042.1	MA0042.1	0.407
MA0043.1	MA0043.1	0.00324
MA0046.1	MA0046.1	0.883
MA0047.2	MA0047.2	0.357
MA0048.1	MA0048.1	0.165
MA0050.1	MA0050.1	0.712
MA0051.1	MA0051.1	0.589
MA0052.1	MA0052.1	0.71
MA0055.1	MA0055.1	0.191
MA0057.1	MA0057.1	0.868
MA0058.1	MA0058.1	0.252
MA0059.1	MA0059.1	0.393
MA0060.1	MA0060.1	4.85049e-4
MA0061.1	MA0061.1	1.81579e-5
MA0062.2	MA0062.2	0.0204
MA0065.2	MA0065.2	0.589
MA0066.1	MA0066.1	0.544
MA0067.1	MA0067.1	0.0503
MA0068.1	MA0068.1	0.283
MA0069.1	MA0069.1	0.948
MA0070.1	MA0070.1	0.526
MA0071.1	MA0071.1	0.878
MA0072.1	MA0072.1	0.733
MA0073.1	MA0073.1	0.999
MA0074.1	MA0074.1	0.329
MA0076.1	MA0076.1	0.583
MA0077.1	MA0077.1	0.697
MA0078.1	MA0078.1	0.195
MA0079.2	MA0079.2	0.23
MA0080.2	MA0080.2	1.25486e-9
MA0081.1	MA0081.1	0.189
MA0083.1	MA0083.1	0.0113
MA0084.1	MA0084.1	0.184
MA0087.1	MA0087.1	0.0273
MA0088.1	MA0088.1	0.476
MA0090.1	MA0090.1	1.14455e-5
MA0091.1	MA0091.1	0.0984
MA0092.1	MA0092.1	0.812
MA0093.1	MA0093.1	0.535
MA0099.2	MA0099.2	4.46647e-4
MA0100.1	MA0100.1	0.481
MA0101.1	MA0101.1	1.4519e-4
MA0102.2	MA0102.2	0.00584
MA0103.1	MA0103.1	1.35493e-4
MA0104.2	MA0104.2	0.142
MA0105.1	MA0105.1	0.051
MA0106.1	MA0106.1	0.618
MA0107.1	MA0107.1	1.51795e-5
MA0108.2	MA0108.2	0.328
MA0111.1	MA0111.1	0.52
MA0112.2	MA0112.2	0.628
MA0113.1	MA0113.1	0.822
MA0114.1	MA0114.1	0.965
MA0115.1	MA0115.1	0.438
MA0116.1	MA0116.1	0.848
MA0117.1	MA0117.1	0.561
MA0119.1	MA0119.1	0.178
MA0122.1	MA0122.1	0.612
MA0124.1	MA0124.1	0.17
MA0125.1	MA0125.1	0.525
MA0131.1	MA0131.1	0.368
MA0135.1	MA0135.1	0.443
MA0136.1	MA0136.1	3.13097e-10
MA0137.2	MA0137.2	0.916
MA0138.2	MA0138.2	0.416
MA0139.1	MA0139.1	0.992
MA0140.1	MA0140.1	0.975
MA0141.1	MA0141.1	0.993
MA0142.1	MA0142.1	0.347
MA0143.1	MA0143.1	0.552
MA0144.1	MA0144.1	0.811
MA0145.1	MA0145.1	0.85
MA0146.1	MA0146.1	0.373
MA0147.1	MA0147.1	0.0491
MA0148.1	MA0148.1	0.592
MA0149.1	MA0149.1	0.875
MA0150.1	MA0150.1	7.71801e-4
MA0152.1	MA0152.1	0.00942
MA0153.1	MA0153.1	0.0837
MA0154.1	MA0154.1	0.0409
MA0155.1	MA0155.1	0.997
MA0156.1	MA0156.1	5.66278e-5
MA0157.1	MA0157.1	0.125
MA0159.1	MA0159.1	0.0279
MA0160.1	MA0160.1	0.0886
MA0162.1	MA0162.1	0.019
MA0163.1	MA0163.1	0.761
MA0164.1	MA0164.1	0.247
MA0258.1	MA0258.1	0.108
MA0259.1	MA0259.1	0.864

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10863

Novel motif	Logo	P-value
1	1	0.445
10	10	0.871
100	100	0.63
101	101	0.832
102	102	0.00608
103	103	0.871
104	104	0.917
105	105	0.881
106	106	0.0487
107	107	0.286
108	108	0.152
109	109	0.867
11	11	0.894
110	110	0.37
111	111	0.288
112	112	0.246
113	113	0.382
114	114	0.985
115	115	0.504
116	116	0.198
117	117	0.774
118	118	0.179
119	119	0.82
12	12	0.158
120	120	0.981
121	121	0.94
122	122	0.00563
123	123	9.16613e-4
124	124	0.708
125	125	0.903
126	126	0.673
127	127	0.152
128	128	0.655
129	129	0.889
13	13	0.683
130	130	0.0107
131	131	0.08
132	132	0.322
133	133	0.121
134	134	0.0471
135	135	0.185
136	136	0.672
137	137	0.0161
138	138	0.197
139	139	0.0918
14	14	0.284
140	140	0.129
141	141	0.0477
142	142	0.431
143	143	0.196
144	144	0.584
145	145	0.518
146	146	0.0536
147	147	0.324
148	148	0.154
149	149	0.585
15	15	0.241
150	150	0.554
151	151	0.457
152	152	0.748
153	153	0.748
154	154	0.164
155	155	0.0038
156	156	0.239
157	157	0.197
158	158	0.00635
159	159	0.0691
16	16	0.752
160	160	0.971
161	161	0.821
162	162	0.244
163	163	0.96
164	164	0.0326
165	165	0.548
166	166	0.111
167	167	0.992
168	168	0.37
169	169	0.318
17	17	0.992
18	18	0.691
19	19	0.0693
2	2	0.933
20	20	0.656
21	21	0.954
22	22	0.39
23	23	0.317
24	24	0.546
25	25	0.258
26	26	0.443
27	27	0.707
28	28	0.118
29	29	0.477
3	3	0.709
30	30	0.21
31	31	0.693
32	32	2.17427e-5
33	33	0.147
34	34	0.785
35	35	0.29
36	36	0.813
37	37	0.507
38	38	0.399
39	39	0.336
4	4	0.0128
40	40	0.792
41	41	0.0235
42	42	0.931
43	43	0.166
44	44	0.861
45	45	0.304
46	46	0.148
47	47	0.816
48	48	0.94
49	49	0.0399
5	5	0.729
50	50	0.619
51	51	0.477
52	52	0.858
53	53	0.056
54	54	0.91
55	55	0.787
56	56	0.909
57	57	0.772
58	58	0.0419
59	59	0.648
6	6	0.908
60	60	0.0637
61	61	0.804
62	62	0.0487
63	63	0.537
64	64	0.454
65	65	0.748
66	66	0.202
67	67	0.663
68	68	0.171
69	69	0.866
7	7	0.616
70	70	0.155
71	71	0.569
72	72	0.423
73	73	0.507
74	74	0.495
75	75	0.624
76	76	0.85
77	77	0.759
78	78	0.922
79	79	0.397
8	8	0.411
80	80	0.886
81	81	0.718
82	82	0.0463
83	83	0.412
84	84	0.969
85	85	0.821
86	86	0.483
87	87	0.336
88	88	0.691
89	89	0.602
9	9	0.994
90	90	0.726
91	91	0.969
92	92	0.151
93	93	0.818
94	94	0.423
95	95	0.889
96	96	0.212
97	97	0.306
98	98	0.737
99	99	2.94251e-4

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10863

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000170 human smooth muscle cell of the brain vasculature sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0000222 (mesodermal cell)
0002590 (smooth muscle cell of the brain vasculature)
0000355 (multi-potent skeletal muscle stem cell)
0000514 (smooth muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000955 (brain)
0001134 (skeletal muscle tissue)
0002100 (trunk)
0000483 (epithelium)
0000033 (head)
0000926 (mesoderm)
0000479 (tissue)
0000073 (regional part of nervous system)
0004121 (ectoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0002616 (regional part of brain)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0002049 (vasculature)
0005284 (brain vasculature)
0000486 (multilaminar epithelium)
0003104 (mesenchyme)
0002200 (vasculature of head)
0006876 (vasculature of organ)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0007798 (vascular system)
0001015 (musculature)
0002532 (epiblast (generic))
0001017 (central nervous system)
0002329 (somite)
0001016 (nervous system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002204 (musculoskeletal system)
0000924 (ectoderm)
0004535 (cardiovascular system)
0000383 (musculature of body)
0003077 (paraxial mesoderm)
0004290 (dermomyotome)
0009142 (entire embryonic mesenchyme)
0001009 (circulatory system)
0006238 (future brain)
0006601 (presumptive ectoderm)
0006603 (presumptive mesoderm)
0003082 (myotome)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr6:85474299..85474324,-!p1@TBX18!1.69!83.36!TBX18;;chr3:147127142..147127168,+!p1@ZIC1!1.65!43.54!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!1.61!40.19!ZIC1;;chr3:147111231..147111281,+!p3@ZIC1!1.55!34.61!ZIC1;;chr14:61116183..61116208,-!p1@SIX1!1.49!109.79!SIX1;;chr4:4861385..4861398,+!p1@MSX1!1.45!78.53!MSX1;;chr12:66218598..66218645,+!p2@HMGA2!1.37!100.48!HMGA2;;chr15:42749722..42749739,-!p2@ZFP106!1.35!37.59!ZFP106;;chr15:57511609..57511651,+!p2@TCF12!1.26!29.03!TCF12;;chr2:19558373..19558392,-!p1@OSR1!1.25!45.03!OSR1;;chr13:100634031..100634045,+!p1@ZIC2!1.25!16.75!ZIC2;;chr3:12330560..12330579,+!p1@PPARG!1.24!18.98!PPARG;;chr15:80843484..80843499,+!p5@ARNT2!1.23!16.00!ARNT2;;chr5:92918919..92918942,+!p1@NR2F1!1.20!65.50!NR2F1;;chr15:80696703..80696754,+!p1@ARNT2!1.17!18.24!ARNT2;;chr3:147139053..147139112,+!p5@ZIC1!1.17!13.77!ZIC1;;chr1:170632959..170632987,+!p4@PRRX1!1.13!13.77!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.12!16.75!PRRX1;;chr7:19157248..19157268,-!p1@TWIST1!1.11!33.12!TWIST1;;chr16:86600426..86600441,+!p1@FOXC2!1.10!28.66!FOXC2;;chr3:25469724..25469773,+!p1@RARB!1.08!16.00!RARB;;chr7:150946015..150946070,-!p3@SMARCD3!1.06!22.70!SMARCD3;;chr1:170633262..170633285,+!p3@PRRX1!1.06!11.91!PRRX1;;chr6:134210243..134210257,+!p1@TCF21!1.04!10.05!TCF21;;chr5:72744594..72744609,-!p1@FOXD1!1.03!45.03!FOXD1;;chr1:170632285..170632309,+!p1@PRRX1!1.03!11.16!PRRX1;;chr3:147111317..147111328,+!p8@ZIC1!1.03!9.68!ZIC1;;chr12:66218255..66218304,+!p3@HMGA2!1.02!26.05!HMGA2;;chr12:85673977..85674015,+!p1@ALX1!1.01!9.30!ALX1;;chr5:72744445..72744466,-!p2@FOXD1!0.97!14.14!FOXD1;;chr19:45260775..45260838,+!p5@BCL3!0.96!10.79!BCL3;;chr12:66218836..66218888,+!p1@HMGA2!0.95!76.29!HMGA2;;chr1:119530636..119530653,-!p2@TBX15!0.95!7.82!TBX15;;chr14:61116168..61116180,-!p2@SIX1!0.93!8.56!SIX1;;chr3:25470156..25470227,+!p2@RARB!0.93!7.44!RARB;;chr2:45236540..45236577,-!p1@SIX2!0.91!7.07!SIX2;;chr3:147111198..147111225,+!p4@ZIC1!0.91!7.07!ZIC1;;chr5:158526459..158526481,-!p2@EBF1!0.90!9.30!EBF1;;chr5:72743793..72743855,-!p4@FOXD1!0.86!7.44!FOXD1;;chr5:72744336..72744359,-!p5@FOXD1!0.86!6.33!FOXD1;;chr2:5832508..5832524,+!p1@SOX11!0.86!6.33!SOX11;;chr13:100634004..100634025,+!p2@ZIC2!0.86!6.33!ZIC2;;chr1:151032860..151032918,+!p1@MLLT11!0.84!74.80!MLLT11;;chr2:166326200..166326216,+!p1@CSRNP3!0.84!8.93!CSRNP3;;chr8:77593474..77593612,+!p1@ZFHX4!0.83!26.05!ZFHX4;;chr6:1610293..1610310,+!p1@FOXC1!0.82!9.68!FOXC1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.82!5.95!GLIS1;;chr8:25902876..25902936,-!p1@EBF2!0.82!5.58!EBF2;;chr13:100623375..100623425,-!p1@ZIC5!0.82!5.58!ZIC5;;chr13:100638100..100638115,+!p4@ZIC2!0.82!5.58!ZIC2;;chr9:16870659..16870675,-!p2@BNC2!0.80!6.70!BNC2;;chr11:12696071..12696086,+!p3@TEAD1!0.79!7.07!TEAD1;;chr21:30671690..30671762,+!p2@BACH1!0.78!18.24!BACH1;;chr5:72744562..72744573,-!p3@FOXD1!0.78!6.33!FOXD1;;chr5:158526917..158526932,-!p1@EBF1!0.77!13.03!EBF1;;chr15:96869255..96869291,+!p6@NR2F2!0.77!9.30!NR2F2;;chr1:119530493..119530572,-!p1@TBX15!0.77!4.84!TBX15;;chr11:46299539..46299620,+!p2@CREB3L1!0.76!8.56!CREB3L1;;chr15:96869114..96869160,+!p11@NR2F2!0.76!6.70!NR2F2;;chr12:66218573..66218596,+!p7@HMGA2!0.74!7.07!HMGA2;;chr15:96869165..96869183,+!p20@NR2F2!0.74!4.47!NR2F2;;chr3:147111285..147111298,+!p10@ZIC1!0.74!4.47!ZIC1;;chr3:147124307..147124336,-!p2@ZIC4!0.74!4.47!ZIC4;;chr19:46801639..46801699,+!p1@HIF3A!0.74!4.47!HIF3A;;chr1:203055129..203055147,-!p1@MYOG!0.74!4.47!MYOG;;chr11:46299199..46299233,+!p1@CREB3L1!0.73!25.31!CREB3L1;;chr12:66218183..66218209,+!p4@HMGA2!0.73!8.93!HMGA2;;chr8:49833948..49833973,-!p2@SNAI2!0.70!28.66!SNAI2;;chr3:12329358..12329393,+!p3@PPARG!0.70!10.79!PPARG;;chr3:12329397..12329433,+!p2@PPARG!0.69!9.68!PPARG;;chr12:66218378..66218401,+!p6@HMGA2!0.69!6.33!HMGA2;;chr9:16870710..16870763,-!p1@BNC2!0.68!7.07!BNC2;;chr6:85474198..85474212,-!p3@TBX18!0.67!3.72!TBX18;;chr19:46800289..46800327,+!p2@HIF3A!0.67!3.72!HIF3A;;chr15:80696666..80696700,+!p4@ARNT2!0.67!3.72!ARNT2;;chr13:100634130..100634143,+!p3@ZIC2!0.67!3.72!ZIC2;;chr5:92919100..92919135,+!p3@NR2F1!0.66!4.47!NR2F1;;chr20:62462566..62462631,-!p1@ZBTB46!0.65!7.07!ZBTB46;;chr17:59477233..59477263,+!p1@TBX2!0.64!11.91!TBX2;;chr15:96876966..96877017,+!p12@NR2F2!0.64!5.21!NR2F2;;chr6:45390077..45390105,+!p9@RUNX2!0.64!4.47!RUNX2;;chr7:150945663..150945692,-!p5@SMARCD3!0.64!3.35!SMARCD3;;chr8:93074848..93074871,-!p3@RUNX1T1!0.64!3.35!RUNX1T1;;chr11:125034640..125034655,+!p1@PKNOX2!0.64!3.35!PKNOX2;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.35!HMGA2;;chr7:14028488..14028516,-!p2@ETV1!0.63!3.72!ETV1;;chr7:14029283..14029311,-!p1@ETV1!0.62!20.10!ETV1;;chr11:47279248..47279264,+!p3@NR1H3!0.62!3.72!NR1H3;;chr5:92918894..92918912,+!p2@NR2F1!0.61!11.54!NR2F1;;chr1:151032922..151032951,+!p2@MLLT11!0.61!5.58!MLLT11;;chr12:66218212..66218244,+!p5@HMGA2!0.61!4.84!HMGA2;;chr5:92920456..92920488,+!p9@NR2F1!0.61!3.72!NR2F1;;chr5:92918860..92918871,+!p10@NR2F1!0.60!3.35!NR2F1;;chr8:7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6L1!0.14!0.37!ZFP36L1;;chr19:38183103..38183114,-!p5@ZNF781!0.14!0.37!ZNF781;;chr19:38714847..38714878,-!p3@DPF1!0.14!0.37!DPF1;;chr19:46843663..46843674,+!p8@HIF3A!0.14!0.37!HIF3A;;chr19:49140658..49140667,-!p8@DBP!0.14!0.37!DBP;;chr19:53758167..53758190,-!p3@ZNF677!0.14!0.37!ZNF677;;chr19:54024313..54024361,+!p7@ZNF331!0.14!0.37!ZNF331;;chr19:56146455..56146471,+!p19@ZNF580,p7@ZNF581!0.14!0.37!ZNF580;;chr19:57352109..57352153,-!p2@ZIM2!0.14!0.37!ZIM2;;chr19:57792129..57792140,+!p11@ZNF460!0.14!0.37!ZNF460;;chr19:58545369..58545404,+!p2@ZSCAN1!0.14!0.37!ZSCAN1;;chr19:58545454..58545498,+!p1@ZSCAN1!0.14!0.37!ZSCAN1;;chr19:9473676..9473712,+!p2@ZNF177,p2@ZNF559-ZNF177!0.14!0.37!ZNF177;;chr1:114301553..114301576,-!p6@PHTF1!0.14!0.37!PHTF1;;chr1:119530857..119530884,-!p4@TBX15!0.14!0.37!TBX15;;chr1:14057463..14057496,+!p4@PRDM2!0.14!0.37!PRDM2;;chr1:151030388..151030419,+!p9@MLLT11!0.14!0.37!MLLT11;;chr1:157108746..157108762,-!p4@ETV3!0.14!0.37!ETV3;;chr1:158985686..158985719,+!p15@IFI16!0.14!0.37!IFI16;;chr1:158985723..158985746,+!p20@IFI16!0.14!0.37!IFI16;;chr1:164528667..164528674,+!p18@PBX1!0.14!0.37!PBX1;;chr1:164528866..164528877,+!p12@PBX1!0.14!0.37!PBX1;;chr1:164528942..164528964,+!p11@PBX1!0.14!0.37!PBX1;;chr1:166958504..166958525,+!p1@MAEL!0.14!0.37!MAEL;;chr1:170631904..170631913,+!p34@PRRX1!0.14!0.37!PRRX1;;chr1:170632115..170632136,+!p9@PRRX1!0.14!0.37!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!0.14!0.37!PRRX1;;chr1:170632325..170632339,+!p24@PRRX1!0.14!0.37!PRRX1;;chr1:170632527..170632533,+!p32@PRRX1!0.14!0.37!PRRX1;;chr1:170632867..170632878,+!p21@PRRX1!0.14!0.37!PRRX1;;chr1:170633294..170633303,+!p23@PRRX1!0.14!0.37!PRRX1;;chr1:201979703..201979721,+!p2@ELF3!0.14!0.37!ELF3;;chr1:211432862..211432871,+!p10@RCOR3!0.14!0.37!RCOR3;;chr1:217262969..217262995,-!p7@ESRRG!0.14!0.37!ESRRG;;chr1:221053444..221053473,+!p8@HLX!0.14!0.37!HLX;;chr1:226411208..226411223,+!p2@MIXL1!0.14!0.37!MIXL1;;chr1:227751287..227751298,+!p2@ZNF678!0.14!0.37!ZNF678;;chr1:23694532..23694549,-!p8@ZNF436!0.14!0.37!ZNF436;;chr1:32930647..32930684,+!p1@ZBTB8B,p4@ZBTB8A!0.14!0.37!ZBTB8B;;chr1:42384322..42384336,-!p5@HIVEP3!0.14!0.37!HIVEP3;;chr1:47696918..47696935,-!p6@TAL1!0.14!0.37!TAL1;;chr1:52991933..52991947,-!p3@ZCCHC11!0.14!0.37!ZCCHC11;;chr1:61547405..61547434,+!p11@NFIA!0.14!0.37!NFIA;;chr1:61547846..61547856,+!p14@NFIA!0.14!0.37!NFIA;;chr1:61869752..61869782,+!p13@NFIA!0.14!0.37!NFIA;;chr1:6479968..6479986,-!p1@HES2!0.14!0.37!HES2;;chr1:8586069..8586080,-!p35@RERE!0.14!0.37!RERE;;chr1:8586084..8586100,-!p20@RERE!0.14!0.37!RERE;;chr20:23342653..23342680,+!p3@GZF1!0.14!0.37!GZF1;;chr20:30433396..30433414,-!p1@FOXS1!0.14!0.37!FOXS1;;chr20:30433431..30433442,-!p2@FOXS1!0.14!0.37!FOXS1;;chr20:48808672..48808680,+!p26@CEBPB!0.14!0.37!CEBPB;;chr20:50721788..50721799,-!p8@ZFP64!0.14!0.37!ZFP64;;chr20:50721883..50721896,-!p11@ZFP64!0.14!0.37!ZFP64;;chr20:55205825..55205847,+!p2@TFAP2C!0.14!0.37!TFAP2C;;chr21:36421401..36421414,-!p16@RUNX1!0.14!0.37!RUNX1;;chr21:38071403..38071428,+!p2@SIM2!0.14!0.37!SIM2;;chr5:124082428..124082439,-!p16@ZNF608!0.14!0.37!ZNF608;;chr5:124082548..124082571,-!p9@ZNF608!0.14!0.37!ZNF608;;chr5:124082614..124082617,-!p26@ZNF608!0.14!0.37!ZNF608;;chr5:124084466..124084484,-!p6@ZNF608!0.14!0.37!ZNF608;;chr5:124084526..124084532,-!p17@ZNF608!0.14!0.37!ZNF608;;chr5:134369643..134369675,-!p4@PITX1!0.14!0.37!PITX1;;chr5:134369879..134369898,-!p2@PITX1!0.14!0.37!PITX1;;chr5:142780168..142780186,-!p23@NR3C1!0.14!0.37!NR3C1;;chr5:142780237..142780261,-!p7@NR3C1!0.14!0.37!NR3C1;;chr5:142782862..142782881,-!p11@NR3C1!0.14!0.37!NR3C1;;chr5:158523357..158523390,-!p9@EBF1!0.14!0.37!EBF1;;

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FF:11234-116D1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:42, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0