FFCP PHASE1:Hg19::chr15:88799384..88799430,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4916|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8033|TSSclassifier=S|UniProt=Q96CY4,Q16288|association_with_transcript=0bp_to_ENST00000540489,ENST00000557856,ENST00000558676,uc002bmh.2,uc010bnh.1_5end|coexpression_cluster_id=C1414|description=CAGE_peak_3_at_NTRK3_5end|id=chr15:88799384..88799430,-|ontology_enrichment_celltype=CL:0000133!5.03e-07!59;CL:0000128!8.34e-07!7;CL:0000126!8.34e-07!7;CL:0000127!8.34e-07!7;CL:0002453!8.34e-07!7|ontology_enrichment_celltype_v019=CL:0000128;8.18e-09;7!CL:0000126;8.18e-09;7!CL:0000127;8.18e-09;7|ontology_enrichment_celltype_v019_2=CL:0000128,6.71e-09,7;CL:0000126,6.71e-09,7;CL:0000127,6.71e-09,7;CL:0002453,6.71e-09,7|ontology_enrichment_development_v019=UBERON:0006601;6.62e-16;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.16e-59!82;UBERON:0005743!4.80e-58!86;UBERON:0007023!2.52e-57!115;UBERON:0000073!2.78e-57!94;UBERON:0001016!2.78e-57!94;UBERON:0001049!2.43e-53!57;UBERON:0005068!2.43e-53!57;UBERON:0006241!2.43e-53!57;UBERON:0007135!2.43e-53!57;UBERON:0002616!1.85e-51!59;UBERON:0000955!7.56e-50!69;UBERON:0006238!7.56e-50!69;UBERON:0003075!1.51e-46!86;UBERON:0007284!1.51e-46!86;UBERON:0002346!2.38e-44!90;UBERON:0003080!3.35e-40!42;UBERON:0002780!7.69e-40!41;UBERON:0001890!7.69e-40!41;UBERON:0006240!7.69e-40!41;UBERON:0004121!2.32e-36!169;UBERON:0000924!1.85e-35!173;UBERON:0006601!1.85e-35!173;UBERON:0001893!8.83e-35!34;UBERON:0002020!1.05e-34!34;UBERON:0003528!1.05e-34!34;UBERON:0002791!9.43e-34!33;UBERON:0001869!3.98e-33!32;UBERON:0000153!9.96e-33!129;UBERON:0007811!9.96e-33!129;UBERON:0003056!1.35e-31!61;UBERON:0000033!1.56e-31!123;UBERON:0000956!3.43e-26!25;UBERON:0000203!3.43e-26!25;UBERON:0002619!1.27e-23!22;UBERON:0001950!1.38e-21!20;UBERON:0000025!5.41e-15!194;UBERON:0003076!8.53e-14!15;UBERON:0003057!8.53e-14!15;UBERON:0000477!8.14e-13!286;UBERON:0004732!5.30e-12!13;UBERON:0004111!8.53e-12!241;UBERON:0004733!2.72e-11!12;UBERON:0002028!2.72e-11!12;UBERON:0007277!2.72e-11!12;UBERON:0000064!2.16e-10!219;UBERON:0002420!3.58e-10!9;UBERON:0007245!3.58e-10!9;UBERON:0010009!3.58e-10!9;UBERON:0010011!3.58e-10!9;UBERON:0000454!3.58e-10!9;UBERON:0002308!7.18e-10!9;UBERON:0000125!7.18e-10!9;UBERON:0000062!1.37e-09!511;UBERON:0000475!1.40e-09!365;UBERON:0001871!4.57e-09!7;UBERON:0000119!4.96e-09!312;UBERON:0000481!6.04e-09!347;UBERON:0000483!7.77e-09!309;UBERON:0002680!9.73e-09!9;UBERON:0001895!9.73e-09!9;UBERON:0010092!9.73e-09!9;UBERON:0000468!2.66e-08!659;UBERON:0009663!3.87e-08!7;UBERON:0000922!4.44e-08!612;UBERON:0002298!7.03e-08!8;UBERON:0000200!3.01e-07!6|ontology_enrichment_uberon_v019=UBERON:0001869;1.31e-41;32!UBERON:0002791;2.06e-41;32!UBERON:0001893;2.25e-41;34!UBERON:0003528;2.59e-41;34!UBERON:0002020;2.59e-41;34!UBERON:0002780;1.16e-37;41!UBERON:0001890;1.16e-37;41!UBERON:0000073;3.22e-37;53!UBERON:0002616;3.22e-37;53!UBERON:0000956;5.10e-36;25!UBERON:0000203;5.10e-36;25!UBERON:0002619;2.05e-32;22!UBERON:0001950;1.49e-29;20!UBERON:0001017;6.43e-29;75!UBERON:0000955;1.09e-26;68!UBERON:0001016;4.92e-24;83!UBERON:0004732;3.92e-16;13!UBERON:0007023;4.43e-16;114!UBERON:0004733;4.07e-15;12!UBERON:0002028;4.07e-15;12!UBERON:0002420;1.33e-13;9!UBERON:0007245;1.33e-13;9!UBERON:0010009;1.33e-13;9!UBERON:0010011;1.33e-13;9!UBERON:0000454;1.33e-13;9!UBERON:0000125;3.29e-13;9!UBERON:0002308;3.29e-13;9!UBERON:0000922;4.16e-12;49!UBERON:0002680;1.61e-11;9!UBERON:0001895;1.61e-11;9!UBERON:0009663;9.04e-11;7!UBERON:0001871;1.03e-10;6!UBERON:0011216;4.16e-10;132!UBERON:0000200;1.57e-09;6!UBERON:0002298;6.89e-09;6!UBERON:0000349;9.33e-09;5!UBERON:0002021;2.41e-08;5!UBERON:0001872;2.67e-08;5!UBERON:0002037;6.93e-08;6!UBERON:0010314;8.71e-08;132!UBERON:0000369;1.98e-07;4!UBERON:0002435;1.98e-07;4!UBERON:0000204;1.98e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.92e-72,81;UBERON:0001049,2.27e-71,56;UBERON:0005068,2.27e-71,56;UBERON:0006241,2.27e-71,56;UBERON:0007135,2.27e-71,56;UBERON:0001016,2.96e-69,89;UBERON:0000073,1.52e-67,53;UBERON:0002616,1.52e-67,53;UBERON:0000955,4.43e-63,68;UBERON:0006238,4.43e-63,68;UBERON:0007023,7.41e-57,114;UBERON:0003075,7.56e-57,82;UBERON:0007284,7.56e-57,82;UBERON:0002346,3.60e-53,86;UBERON:0002780,5.69e-53,41;UBERON:0001890,5.69e-53,41;UBERON:0003080,5.69e-53,41;UBERON:0006240,5.69e-53,41;UBERON:0001893,4.33e-48,34;UBERON:0003528,5.55e-48,34;UBERON:0002020,5.55e-48,34;UBERON:0001869,9.09e-46,32;UBERON:0002791,1.88e-45,32;UBERON:0010371,1.26e-44,104;UBERON:0010314,4.14e-40,132;UBERON:0004121,4.38e-40,171;UBERON:0000924,4.38e-40,171;UBERON:0006601,4.38e-40,171;UBERON:0003056,1.15e-37,61;UBERON:0000956,4.91e-36,25;UBERON:0000203,4.91e-36,25;UBERON:0011216,1.53e-32,223;UBERON:0002619,1.97e-32,22;UBERON:0001950,1.41e-29,20;UBERON:0000025,3.89e-21,192;UBERON:0003076,1.16e-18,15;UBERON:0003057,1.16e-18,15;UBERON:0004111,1.68e-18,240;UBERON:0004732,3.75e-16,13;UBERON:0004733,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4916 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8033 | |||
|TSSclassifier=S | |||
|UniProt=Q96CY4,Q16288 | |||
|association_with_transcript=0bp_to_ENST00000540489,ENST00000557856,ENST00000558676,uc002bmh.2,uc010bnh.1_5end | |||
|coexpression_cluster_id=C1414 | |||
|description=CAGE_peak_3_at_NTRK3_5end | |||
|id=chr15:88799384..88799430,- | |||
|ontology_enrichment_celltype=CL:0000133!5.03e-07!59;CL:0000128!8.34e-07!7;CL:0000126!8.34e-07!7;CL:0000127!8.34e-07!7;CL:0002453!8.34e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;8.18e-09;7!CL:0000126;8.18e-09;7!CL:0000127;8.18e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,6.71e-09,7;CL:0000126,6.71e-09,7;CL:0000127,6.71e-09,7;CL:0002453,6.71e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.62e-16;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.16e-59!82;UBERON:0005743!4.80e-58!86;UBERON:0007023!2.52e-57!115;UBERON:0000073!2.78e-57!94;UBERON:0001016!2.78e-57!94;UBERON:0001049!2.43e-53!57;UBERON:0005068!2.43e-53!57;UBERON:0006241!2.43e-53!57;UBERON:0007135!2.43e-53!57;UBERON:0002616!1.85e-51!59;UBERON:0000955!7.56e-50!69;UBERON:0006238!7.56e-50!69;UBERON:0003075!1.51e-46!86;UBERON:0007284!1.51e-46!86;UBERON:0002346!2.38e-44!90;UBERON:0003080!3.35e-40!42;UBERON:0002780!7.69e-40!41;UBERON:0001890!7.69e-40!41;UBERON:0006240!7.69e-40!41;UBERON:0004121!2.32e-36!169;UBERON:0000924!1.85e-35!173;UBERON:0006601!1.85e-35!173;UBERON:0001893!8.83e-35!34;UBERON:0002020!1.05e-34!34;UBERON:0003528!1.05e-34!34;UBERON:0002791!9.43e-34!33;UBERON:0001869!3.98e-33!32;UBERON:0000153!9.96e-33!129;UBERON:0007811!9.96e-33!129;UBERON:0003056!1.35e-31!61;UBERON:0000033!1.56e-31!123;UBERON:0000956!3.43e-26!25;UBERON:0000203!3.43e-26!25;UBERON:0002619!1.27e-23!22;UBERON:0001950!1.38e-21!20;UBERON:0000025!5.41e-15!194;UBERON:0003076!8.53e-14!15;UBERON:0003057!8.53e-14!15;UBERON:0000477!8.14e-13!286;UBERON:0004732!5.30e-12!13;UBERON:0004111!8.53e-12!241;UBERON:0004733!2.72e-11!12;UBERON:0002028!2.72e-11!12;UBERON:0007277!2.72e-11!12;UBERON:0000064!2.16e-10!219;UBERON:0002420!3.58e-10!9;UBERON:0007245!3.58e-10!9;UBERON:0010009!3.58e-10!9;UBERON:0010011!3.58e-10!9;UBERON:0000454!3.58e-10!9;UBERON:0002308!7.18e-10!9;UBERON:0000125!7.18e-10!9;UBERON:0000062!1.37e-09!511;UBERON:0000475!1.40e-09!365;UBERON:0001871!4.57e-09!7;UBERON:0000119!4.96e-09!312;UBERON:0000481!6.04e-09!347;UBERON:0000483!7.77e-09!309;UBERON:0002680!9.73e-09!9;UBERON:0001895!9.73e-09!9;UBERON:0010092!9.73e-09!9;UBERON:0000468!2.66e-08!659;UBERON:0009663!3.87e-08!7;UBERON:0000922!4.44e-08!612;UBERON:0002298!7.03e-08!8;UBERON:0000200!3.01e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.31e-41;32!UBERON:0002791;2.06e-41;32!UBERON:0001893;2.25e-41;34!UBERON:0003528;2.59e-41;34!UBERON:0002020;2.59e-41;34!UBERON:0002780;1.16e-37;41!UBERON:0001890;1.16e-37;41!UBERON:0000073;3.22e-37;53!UBERON:0002616;3.22e-37;53!UBERON:0000956;5.10e-36;25!UBERON:0000203;5.10e-36;25!UBERON:0002619;2.05e-32;22!UBERON:0001950;1.49e-29;20!UBERON:0001017;6.43e-29;75!UBERON:0000955;1.09e-26;68!UBERON:0001016;4.92e-24;83!UBERON:0004732;3.92e-16;13!UBERON:0007023;4.43e-16;114!UBERON:0004733;4.07e-15;12!UBERON:0002028;4.07e-15;12!UBERON:0002420;1.33e-13;9!UBERON:0007245;1.33e-13;9!UBERON:0010009;1.33e-13;9!UBERON:0010011;1.33e-13;9!UBERON:0000454;1.33e-13;9!UBERON:0000125;3.29e-13;9!UBERON:0002308;3.29e-13;9!UBERON:0000922;4.16e-12;49!UBERON:0002680;1.61e-11;9!UBERON:0001895;1.61e-11;9!UBERON:0009663;9.04e-11;7!UBERON:0001871;1.03e-10;6!UBERON:0011216;4.16e-10;132!UBERON:0000200;1.57e-09;6!UBERON:0002298;6.89e-09;6!UBERON:0000349;9.33e-09;5!UBERON:0002021;2.41e-08;5!UBERON:0001872;2.67e-08;5!UBERON:0002037;6.93e-08;6!UBERON:0010314;8.71e-08;132!UBERON:0000369;1.98e-07;4!UBERON:0002435;1.98e-07;4!UBERON:0000204;1.98e-07;4 | |||
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|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,4.80172126499473,1.63200552995402,2.5076377718247,6.86966369114536,7.11747010378998,18.9569385788152,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07976597760949,0.665188192387692,0.43917392846563,4.78073625566651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2663051166458,1.58891016975863,16.6365240034312,1.77334191099179,1.68203280042692,0,1.72667283892012,0,0,0,4.8434376846378,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0,0.646584227275248,0.710019185033229,0.302256294682921,0,0,0,0,2.19552671033272,1.19276791489337,2.32387885739037,3.42081481550722,1.26160425437814,0,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,1.15930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36874410245144,15.6167824629146,13.1459098172208,10.3860084507296,14.6725912880228,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,1.2655176988749,0,0,0,4.45484547096312,0,0,0,0,0,0,0,0,0,0,0,0,4.52032466480971,0.551365343546124,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,169.396454526351,0,0,0,0.213425530045242,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,1.31857361344705,0,0,0,0,0.296964680832639,0.307160702099232,30.8185770807552,19.4123794646508,0.556543525114529,0,0,14.7443511305792,1.38141957765574,0,5.72704622012067,0,0.311039587661807,0,0,0,2.56472854656027,0,0,16.4786566836187,16.9765619636188,13.9729658600836,0,0,0.724999575434793,0,0,0,1.72371686620732,0,0.347249989866585,25.6865001886013,27.7371808838438,13.7323562685375,13.3800904516782,11.5263571391884,12.5049676377764,0,0,4.69396576873162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,2.4441205797345,0,0,0.208843899010911,8.89694955344937,1.60515529459758,14.2901311892457,0,0,0,1.18375320854817,2.41981432097328,24.1797481688087,7.64557613504704,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,2.71176888936639,0,0,19.5630359503665,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,10.8075651967762,7.39289046016762,0,1.71906176567983,0,1.11712960508902,8.70809611244398,1.43574604915363,0,0.429226048136571,0.669514372325618,1.34366944973453,0,0,0,0,0,0,0,39.7614844904652,16.6168155456122,0.643012593860077,0.687697182986169,0,0,0,30.6177765556444,0,1.26089131678717,4.19636705079985,0,0,0,1.42939065274673,0.662091970365432,2.5426853765475,0,0,0.326587360109409,0,0,3.40776043570843,0,0,1.32506888912221,14.2211251997706,10.0496777324444,5.8169524880672,0,0.747511887973863,1.57204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0,1.31149052283922,0,13.2910226995048,18.3039397352945,16.6503937839645,8.027728739661,8.65246601987448,16.1450647647597,0.415045904808692,0,0,0,0,0,1.1593682288866,0,0,0,0,0.251567901752575,0,0.457680136793847,5.59554417923984,0,0,0,0,0,0,0.53168342911599,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0.57785949122191,0,0.260994291965212,0.226705925512272,1.15761237161917,0,1.07453304648892,0,0,0.706756583783524,0,0,0,0,0,10.9224164559867,0,0,0,0,0,0,0,0.533458648470704,0,2.83757976783418,0,0,3.11038630016486,14.9636414425272,0.539124056983409,0,1.74735421107222,0,0.425149840203366,0,0,0.318004350653419,0.315446980005013,0,0,0,30.0592773451431,21.2544864488377,9.41839768437193,15.1786109538159,36.0462525597057,18.8799299227315,14.048381169971,4.28308260777463,0,0,0,0,0,0,0,2.03067886542995,2.62216589314576,0,0,0.163771917510097,0,19.3157492008609,11.7161714792077,14.8814493480853,16.7417738911914,34.4594129681478,0,3.47347824872506,0,0,2.67850917939143,2.01770233331294,1.82089681270989,0.91064876540519,0.0887023701626388,0,0,11.6228243390382,19.2714226539148,0,0,1.49136876415977,34.2511986016884,0,9.13158720509496,0,0,6.07550625501579,0,0,0,0,0,0.3414369541879,0,1.29068207646083,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.718639647993729,2.3196288626764,3.88568794447312,0,0,0,0.11294608203896,0,0,0.694567422971502,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| |||
|short_description=p3@NTRK3 | |||
}} |
Revision as of 08:43, 11 September 2013
Short description: | p3@NTRK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NTRK3_5end |
Coexpression cluster: | C1414_Wilms_cerebellum_parietal_hippocampus_medial_caudate_middle |
Association with transcript: | 0bp_to_ENST00000540489, ENST00000557856, ENST00000558676, uc002bmh.2, uc010bnh.1_5end |
EntrezGene: | NTRK3 |
HGNC: | 8033 |
UniProt: | Q96CY4Q16288 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 6.71e-09 | 7 |
macroglial cell | 6.71e-09 | 7 |
astrocyte | 6.71e-09 | 7 |
oligodendrocyte precursor cell | 6.71e-09 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.