FFCP PHASE1:Hg19::chr20:42193850..42193855,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10110|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13900|TSSclassifier=S|UniProt=|association_with_transcript=4bp_to_uc002xku.2_5end|coexpression_cluster_id=C4|description=CAGE_peak_5_at_SGK2_5end|id=chr20:42193850..42193855,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;4.72e-17;1!UBERON:0006222;1.65e-16;1!UBERON:0006601;1.37e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.84e-97!57;UBERON:0005068!1.84e-97!57;UBERON:0006241!1.84e-97!57;UBERON:0007135!1.84e-97!57;UBERON:0002616!6.95e-78!59;UBERON:0000955!5.94e-74!69;UBERON:0006238!5.94e-74!69;UBERON:0001017!1.19e-73!82;UBERON:0002780!2.05e-73!41;UBERON:0001890!2.05e-73!41;UBERON:0006240!2.05e-73!41;UBERON:0003080!1.42e-71!42;UBERON:0005743!5.56e-70!86;UBERON:0001893!1.23e-68!34;UBERON:0002020!2.14e-68!34;UBERON:0003528!2.14e-68!34;UBERON:0000073!8.70e-67!94;UBERON:0001016!8.70e-67!94;UBERON:0002791!1.85e-64!33;UBERON:0003075!1.15e-62!86;UBERON:0007284!1.15e-62!86;UBERON:0001869!2.39e-60!32;UBERON:0002346!1.33e-59!90;UBERON:0007023!2.50e-58!115;UBERON:0003056!7.39e-48!61;UBERON:0002619!2.91e-44!22;UBERON:0000033!1.27e-41!123;UBERON:0000153!2.16e-39!129;UBERON:0007811!2.16e-39!129;UBERON:0000956!8.95e-39!25;UBERON:0000203!8.95e-39!25;UBERON:0001950!1.79e-36!20;UBERON:0004121!1.64e-34!169;UBERON:0002308!1.07e-33!9;UBERON:0000125!1.07e-33!9;UBERON:0000924!1.46e-33!173;UBERON:0006601!1.46e-33!173;UBERON:0002298!4.87e-30!8;UBERON:0002420!7.10e-26!9;UBERON:0007245!7.10e-26!9;UBERON:0010009!7.10e-26!9;UBERON:0010011!7.10e-26!9;UBERON:0000454!7.10e-26!9;UBERON:0003076!1.68e-25!15;UBERON:0003057!1.68e-25!15;UBERON:0009663!1.35e-24!7;UBERON:0000025!4.87e-24!194;UBERON:0000200!4.71e-20!6;UBERON:0004111!2.57e-19!241;UBERON:0004732!1.71e-18!13;UBERON:0000477!2.58e-16!286;UBERON:0001896!5.45e-16!3;UBERON:0005290!5.45e-16!3;UBERON:0010096!5.45e-16!3;UBERON:0000988!6.66e-16!3;UBERON:0000349!8.70e-16!5;UBERON:0006331!2.20e-15!3;UBERON:0002240!3.60e-15!3;UBERON:0001871!4.12e-15!7;UBERON:0004733!9.06e-15!12;UBERON:0002028!9.06e-15!12;UBERON:0007277!9.06e-15!12;UBERON:0002771!9.53e-15!3;UBERON:0000475!3.97e-13!365;UBERON:0000064!1.58e-12!219;UBERON:0000483!1.91e-12!309;UBERON:0000119!2.95e-12!312;UBERON:0005162!9.25e-12!2;UBERON:0000122!9.25e-12!2;UBERON:0001875!1.81e-11!2;UBERON:0006514!1.81e-11!2;UBERON:0001897!2.11e-11!2;UBERON:0000369!3.41e-11!4;UBERON:0002435!3.41e-11!4;UBERON:0000204!3.41e-11!4;UBERON:0010082!3.41e-11!4;UBERON:0002148!5.00e-11!2;UBERON:0009662!5.00e-11!2;UBERON:0001954!1.16e-10!2;UBERON:0003022!1.16e-10!2;UBERON:0002421!1.16e-10!2;UBERON:0002600!1.16e-10!2;UBERON:0001872!1.83e-09!5;UBERON:0002021!2.05e-09!5;UBERON:0005174!2.66e-09!5;UBERON:0001137!2.66e-09!5;UBERON:0000062!6.73e-08!511;UBERON:0005383!3.04e-07!3;UBERON:0005382!3.04e-07!3;UBERON:0001894!3.26e-07!7;UBERON:0006222!3.26e-07!7;UBERON:0000941!9.91e-07!1;UBERON:0004904!9.91e-07!1;UBERON:0002464!9.91e-07!1;UBERON:0001021!9.91e-07!1;UBERON:0001785!9.91e-07!1|ontology_enrichment_uberon_v019=UBERON:0002298;9.35e-41;6!UBERON:0005162;3.92e-32;2!UBERON:0000122;3.92e-32;2!UBERON:0001897;3.46e-31;2!UBERON:0010225;3.46e-31;2!UBERON:0004732;1.99e-29;13!UBERON:0001896;2.17e-21;3!UBERON:0005290;2.17e-21;3!UBERON:0000988;3.63e-21;3!UBERON:0004733;1.28e-20;12!UBERON:0002028;1.28e-20;12!UBERON:0001894;4.18e-20;7!UBERON:0000073;8.10e-19;53!UBERON:0002616;8.10e-19;53!UBERON:0000941;4.72e-17;1!UBERON:0001785;4.72e-17;1!UBERON:0002464;4.72e-17;1!UBERON:0004904;4.72e-17;1!UBERON:0001021;4.72e-17;1!UBERON:0002336;6.47e-17;1!UBERON:0011215;6.47e-17;1!UBERON:0001018;6.47e-17;1!UBERON:0002473;6.47e-17;1!UBERON:0005340;6.47e-17;1!UBERON:0003544;6.47e-17;1!UBERON:0005970;6.47e-17;1!UBERON:0002316;6.47e-17;1!UBERON:0001020;6.47e-17;1!UBERON:0002437;6.47e-17;1!UBERON:0002784;3.87e-16;4!UBERON:0002780;1.00e-13;41!UBERON:0001890;1.00e-13;41!UBERON:0000955;1.35e-13;68!UBERON:0001017;2.08e-12;75!UBERON:0007023;8.87e-10;114!UBERON:0003714;3.43e-09;2!UBERON:0001875;3.71e-09;2!UBERON:0006514;3.71e-09;2!UBERON:0001016;4.58e-09;83!UBERON:0002148;6.42e-09;2!UBERON:0006331;6.42e-09;2!UBERON:0009662;6.42e-09;2!UBERON:0000125;8.60e-08;9!UBERON:0002308;8.60e-08;9!UBERON:0002680;1.09e-07;9!UBERON:0001895;1.09e-07;9!UBERON:0001893;6.21e-07;34!UBERON:0003528;6.73e-07;34!UBERON:0002020;6.73e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0002298,7.63e-41,6;UBERON:0000073,5.01e-33,53;UBERON:0002616,5.01e-33,53;UBERON:0005162,3.92e-32,2;UBERON:0000122,3.92e-32,2;UBERON:0001049,3.03e-31,56;UBERON:0005068,3.03e-31,56;UBERON:0006241,3.03e-31,56;UBERON:0007135,3.03e-31,56;UBERON:0001897,4.71e-31,2;UBERON:0010225,4.71e-31,2;UBERON:0000955,3.13e-30,68;UBERON:0006238,3.13e-30,68;UBERON:0004732,1.77e-29,13;UBERON:0001016,6.10e-27,89;UBERON:0003075,2.16e-25,82;UBERON:0007284,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10110 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13900 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_uc002xku.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_SGK2_5end | |||
|id=chr20:42193850..42193855,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.72e-17;1!UBERON:0006222;1.65e-16;1!UBERON:0006601;1.37e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SGK2 | |||
}} |
Revision as of 08:33, 12 September 2013
Short description: | p5@SGK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SGK2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 4bp_to_uc002xku.2_5end |
EntrezGene: | SGK2 |
HGNC: | 13900 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.