FFCP PHASE1:Hg19::chr17:8063613..8063632,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |||
|TSSclassifier=not | |||
|UniProt=Q69Z01 | |||
|association_with_transcript=314bp_to_AL050223_5end | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_19_at_VAMP2_5end | |||
|id=chr17:8063613..8063632,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.69e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.27e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.36e-09;1!UBERON:0003099;1.36e-09;1!UBERON:0003852;1.36e-09;1!UBERON:0006601;1.30e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.93e-24!57;UBERON:0005068!4.93e-24!57;UBERON:0006241!4.93e-24!57;UBERON:0007135!4.93e-24!57;UBERON:0007023!8.72e-23!115;UBERON:0003080!1.64e-22!42;UBERON:0002780!1.07e-21!41;UBERON:0001890!1.07e-21!41;UBERON:0006240!1.07e-21!41;UBERON:0002616!3.57e-21!59;UBERON:0000955!4.39e-21!69;UBERON:0006238!4.39e-21!69;UBERON:0001017!2.09e-20!82;UBERON:0005743!4.54e-19!86;UBERON:0002020!1.93e-18!34;UBERON:0003528!1.93e-18!34;UBERON:0000073!2.01e-18!94;UBERON:0001016!2.01e-18!94;UBERON:0001893!4.61e-18!34;UBERON:0002791!2.44e-17!33;UBERON:0002346!3.45e-17!90;UBERON:0001869!4.90e-17!32;UBERON:0003075!9.64e-16!86;UBERON:0007284!9.64e-16!86;UBERON:0003056!6.48e-15!61;UBERON:0002619!2.41e-13!22;UBERON:0000956!3.24e-12!25;UBERON:0000203!3.24e-12!25;UBERON:0001950!7.47e-12!20;UBERON:0000033!1.65e-10!123;UBERON:0000924!9.54e-10!173;UBERON:0006601!9.54e-10!173;UBERON:0000153!3.82e-09!129;UBERON:0007811!3.82e-09!129;UBERON:0004121!9.10e-09!169;UBERON:0002308!5.60e-08!9;UBERON:0000125!5.60e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.64e-17;22!UBERON:0000956;3.19e-15;25!UBERON:0000203;3.19e-15;25!UBERON:0001950;3.64e-14;20!UBERON:0002791;7.74e-14;32!UBERON:0002780;5.08e-13;41!UBERON:0001890;5.08e-13;41!UBERON:0003528;1.72e-12;34!UBERON:0002020;1.72e-12;34!UBERON:0000955;5.40e-12;68!UBERON:0001869;9.39e-12;32!UBERON:0001893;1.87e-11;34!UBERON:0000073;1.88e-10;53!UBERON:0002616;1.88e-10;53!UBERON:0002426;5.53e-10;1!UBERON:0003831;5.53e-10;1!UBERON:0003898;5.53e-10;1!UBERON:0004830;5.53e-10;1!UBERON:0003830;5.53e-10;1!UBERON:0005175;5.53e-10;1!UBERON:0001774;5.53e-10;1!UBERON:0001103;5.53e-10;1!UBERON:0002038;1.36e-09;1!UBERON:0003112;1.36e-09;1!UBERON:0000941;1.36e-09;1!UBERON:0005705;1.36e-09;1!UBERON:0001785;1.36e-09;1!UBERON:0002464;1.36e-09;1!UBERON:0004904;1.36e-09;1!UBERON:0008193;1.36e-09;1!UBERON:0011158;1.36e-09;1!UBERON:0001021;1.36e-09;1!UBERON:0009661;1.36e-09;1!UBERON:0010912;1.36e-09;1!UBERON:0002514;1.36e-09;1!UBERON:0003457;1.36e-09;1!UBERON:0002950;1.36e-09;1!UBERON:0008907;1.36e-09;1!UBERON:0008001;1.36e-09;1!UBERON:0007213;1.36e-09;1!UBERON:0009891;1.36e-09;1!UBERON:0007914;1.36e-09;1!UBERON:0007375;1.36e-09;1!UBERON:0003323;1.36e-09;1!UBERON:0010258;1.36e-09;1!UBERON:0005253;1.36e-09;1!UBERON:0007842;1.36e-09;1!UBERON:0003128;1.36e-09;1!UBERON:0001891;1.36e-09;1!UBERON:0002397;1.36e-09;1!UBERON:0003113;1.36e-09;1!UBERON:0003277;1.36e-09;1!UBERON:0001703;1.36e-09;1!UBERON:0002241;1.36e-09;1!UBERON:0001709;1.36e-09;1!UBERON:0002244;1.36e-09;1!UBERON:0005620;1.36e-09;1!UBERON:0010364;1.36e-09;1!UBERON:0004288;1.36e-09;1!UBERON:0003296;2.22e-09;4!UBERON:0010133;2.22e-09;4!UBERON:0001017;1.40e-08;75!UBERON:0002021;1.13e-07;5!UBERON:0001016;1.15e-07;83!UBERON:0011159;1.60e-07;5!UBERON:0000200;9.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.83e-18,41;UBERON:0001890,1.83e-18,41;UBERON:0003080,1.83e-18,41;UBERON:0006240,1.83e-18,41;UBERON:0000955,4.79e-18,68;UBERON:0006238,4.79e-18,68;UBERON:0001016,6.69e-18,89;UBERON:0001017,2.10e-17,81;UBERON:0002619,2.40e-17,22;UBERON:0005253,3.37e-17,2;UBERON:0000073,5.19e-17,53;UBERON:0002616,5.19e-17,53;UBERON:0001049,5.07e-16,56;UBERON:0005068,5.07e-16,56;UBERON:0006241,5.07e-16,56;UBERON:0007135,5.07e-16,56;UBERON:0002791,2.71e-15,32;UBERON:0000956,2.93e-15,25;UBERON:0000203,2.93e-15,25;UBERON:0003075,9.16e-15,82;UBERON:0007284,9.16e-15,82;UBERON:0003056,1.41e-14,61;UBERON:0003528,2.32e-14,34;UBERON:0002020,2.32e-14,34;UBERON:0001893,2.32e-14,34;UBERON:0001950,3.74e-14,20;UBERON:0002346,5.55e-14,86;UBERON:0007023,6.72e-14,114;UBERON:0001869,7.33e-12,32;UBERON:0010371,3.37e-11,104;UBERON:0004121,6.69e-11,171;UBERON:0000924,6.69e-11,171;UBERON:0006601,6.69e-11,171;UBERON:0002426,5.31e-10,1;UBERON:0003831,5.31e-10,1;UBERON:0003898,5.31e-10,1;UBERON:0004830,5.31e-10,1;UBERON:0003830,5.31e-10,1;UBERON:0005175,5.31e-10,1;UBERON:0001774,5.31e-10,1;UBERON:0001103,5.31e-10,1;UBERON:0010084,5.31e-10,1;UBERON:0010314,7.72e-10,132;UBERON:0000941,1.25e-09,1;UBERON:0001785,1.25e-09,1;UBERON:0002464,1.25e-09,1;UBERON:0004904,1.25e-09,1;UBERON:0001021,1.25e-09,1;UBERON:0003902,1.25e-09,1;UBERON:0005425,1.25e-09,1;UBERON:0003112,1.62e-09,1;UBERON:0011158,1.62e-09,1;UBERON:0003128,1.62e-09,1;UBERON:0001703,1.62e-09,1;UBERON:0002241,1.62e-09,1;UBERON:0004761,1.62e-09,1;UBERON:0009617,1.62e-09,1;UBERON:0005705,2.08e-09,1;UBERON:0008193,2.08e-09,1;UBERON:0010912,2.08e-09,1;UBERON:0002514,2.08e-09,1;UBERON:0003457,2.08e-09,1;UBERON:0008907,2.08e-09,1;UBERON:0008001,2.08e-09,1;UBERON:0007213,2.08e-09,1;UBERON:0009891,2.08e-09,1;UBERON:0007914,2.08e-09,1;UBERON:0009292,2.08e-09,1;UBERON:0003099,2.08e-09,1;UBERON:0007375,2.08e-09,1;UBERON:0003323,2.08e-09,1;UBERON:0010258,2.08e-09,1;UBERON:0007842,2.08e-09,1;UBERON:0009494,2.08e-09,1;UBERON:0010042,2.08e-09,1;UBERON:0010045,2.08e-09,1;UBERON:0010259,2.08e-09,1;UBERON:0010359,2.08e-09,1;UBERON:0009526,2.08e-09,1;UBERON:0002397,2.08e-09,1;UBERON:0003113,2.08e-09,1;UBERON:0003277,2.08e-09,1;UBERON:0001709,2.08e-09,1;UBERON:0004066,2.08e-09,1;UBERON:0002244,2.08e-09,1;UBERON:0005620,2.08e-09,1;UBERON:0004362,2.08e-09,1;UBERON:0010364,2.08e-09,1;UBERON:0010046,2.08e-09,1;UBERON:0005868,2.08e-09,1;UBERON:0007238,2.08e-09,1;UBERON:0004288,2.08e-09,1;UBERON:0004068,2.08e-09,1;UBERON:0010334,2.08e-09,1;UBERON:0003852,2.08e-09,1;UBERON:0010253,2.08e-09,1;UBERON:0003296,2.08e-09,4;UBERON:0010133,2.08e-09,4;UBERON:0002038,2.67e-09,1;UBERON:0009661,2.67e-09,1;UBERON:0002950,2.67e-09,1;UBERON:0001891,2.67e-09,1;UBERON:0009616,2.67e-09,1;UBERON:0010286,2.67e-09,1;UBERON:0011216,1.17e-07,223;UBERON:0002021,1.32e-07,5;UBERON:0011159,2.02e-07,5;UBERON:0000200,9.74e-07,6 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0.410623275218653,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0,0.589211814949674,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,0,0.535081656179426,1.04535523804977,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0.773288812777695,0.167516265334349,0,1.49801404789436,5.9832291840805,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0.348631135379878,0,0,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0.507447609232169,0,0,0.238231775457789,0,1.29694662238543,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.422008249231538,0.222617410045812,0,0.211125408127993,0.597743964753209,0,0.251932747854276,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,1.93866549219044,0.927680981618513,1.99613798001194,0.520855522170466,0,0.724999575434793,0,0,0,0.344743373241465,0,0.347249989866585,0.885741385813839,0.241192877250816,0,0.552896299656123,1.47773809476774,1.75508317723178,0,0.139423744278603,0,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,2.40773294189637,0.468528891450678,0.364909578431332,0,0,0.394584402849391,0,0.91821828489147,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0.397429223405979,0.949661939338181,0.391102765469606,0.160317640503067,0.426905989478705,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0.458320848023367,0,0.399358000997982,0.429226048136571,0.446342914883745,0,0,0,0,0,0,0,0.254019996197353,1.59045937961861,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0,0.104909176269996,0,0.35857467866569,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.775697738169303,0.26446520348538,0,0,0.320362237703084,0,0,0.496166021811951,0.197611631897944,0,0.638341257770182,0,0,0,0,0.157054096250234,4.43034089983493,8.05373348352957,0.250381861413,0,0.332787154610557,0.124192805882767,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0.468334905806882,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.553033744606923,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.218419276384028,0.169732529954025,0.637724760305049,0.123935764259002,0,0,0.0788617450012534,0,1.05802783107205,0,0.578063025868136,0,0.798169295285756,2.2562800066483,1.26035848110859,0.484100767249525,1.29180516505481,1.42769420259154,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.540300676947157,2.34323429584154,0.206686796501184,0.443910671357348,0.546974809018219,0,0,0.175871244359621,0,0.535701835878287,1.3451348888753,2.42786241694653,0,0.0887023701626388,0,0.342976018874837,0.203909198930495,0.591954962065642,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0.3414369541879,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0.647428837187895,0.102662806856247,0,0,0,0.795803100645473,0.356760272332706,0.11294608203896,0.109940516745429,0.150962843566674,0.231522474323834,0,0.470317296361523,0.490296643507811,0,0.392616934229891,0,0.4226557275834,0.169927114687817,0.187967835959707,0,0.0999411559249289,0,0.705789743431384,0,0,0,1.00337708206016,0,1.56380427439104,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0.101988829741982,0,0,0.250707539292375,0.151557396436479,0.267964130156178,0.829169439458779,0.310298987585686,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p19@VAMP2 | |||
}} |
Revision as of 13:46, 20 January 2014
Short description: | p19@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_VAMP2_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 314bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.27e-12 | 3 |