FFCP PHASE1:Hg19::chrX:70443497..70443516,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4283 | |||
|TSSclassifier=strong | |||
|UniProt=P08034 | |||
|association_with_transcript=-41bp_to_AB590364,BT019329,DQ893515,DQ896494_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_GJB1_5end | |||
|id=chrX:70443497..70443516,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.43e-16;1!UBERON:0005425;1.92e-15;1!UBERON:0006601;2.09e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-70!57;UBERON:0005068!2.43e-70!57;UBERON:0006241!2.43e-70!57;UBERON:0007135!2.43e-70!57;UBERON:0002616!6.97e-58!59;UBERON:0000955!1.84e-56!69;UBERON:0006238!1.84e-56!69;UBERON:0001017!1.77e-54!82;UBERON:0005743!9.72e-52!86;UBERON:0007023!2.02e-50!115;UBERON:0000073!6.03e-50!94;UBERON:0001016!6.03e-50!94;UBERON:0003075!4.95e-45!86;UBERON:0007284!4.95e-45!86;UBERON:0002780!4.09e-44!41;UBERON:0001890!4.09e-44!41;UBERON:0006240!4.09e-44!41;UBERON:0003080!5.42e-43!42;UBERON:0002346!8.34e-43!90;UBERON:0001893!1.62e-37!34;UBERON:0002020!3.29e-37!34;UBERON:0003528!3.29e-37!34;UBERON:0000033!1.36e-34!123;UBERON:0002791!7.44e-34!33;UBERON:0002298!8.29e-34!8;UBERON:0000153!9.71e-33!129;UBERON:0007811!9.71e-33!129;UBERON:0001869!3.98e-30!32;UBERON:0003076!5.77e-29!15;UBERON:0003057!5.77e-29!15;UBERON:0003056!1.50e-28!61;UBERON:0004121!1.59e-27!169;UBERON:0000924!9.22e-27!173;UBERON:0006601!9.22e-27!173;UBERON:0004732!1.07e-26!13;UBERON:0001950!9.85e-25!20;UBERON:0002619!1.99e-22!22;UBERON:0004733!3.75e-22!12;UBERON:0002028!3.75e-22!12;UBERON:0007277!3.75e-22!12;UBERON:0002308!8.44e-22!9;UBERON:0000125!8.44e-22!9;UBERON:0000956!1.24e-19!25;UBERON:0000203!1.24e-19!25;UBERON:0000988!1.29e-17!3;UBERON:0001896!1.44e-17!3;UBERON:0005290!1.44e-17!3;UBERON:0010096!1.44e-17!3;UBERON:0006331!2.26e-17!3;UBERON:0000025!6.21e-17!194;UBERON:0000200!6.78e-15!6;UBERON:0004111!1.03e-13!241;UBERON:0009663!4.75e-13!7;UBERON:0005162!5.89e-13!2;UBERON:0000122!5.89e-13!2;UBERON:0001875!3.92e-12!2;UBERON:0006514!3.92e-12!2;UBERON:0001897!4.15e-12!2;UBERON:0002148!5.19e-12!2;UBERON:0009662!5.19e-12!2;UBERON:0000477!1.10e-11!286;UBERON:0001872!9.47e-11!5;UBERON:0002680!3.29e-10!9;UBERON:0001895!3.29e-10!9;UBERON:0010092!3.29e-10!9;UBERON:0002420!3.54e-10!9;UBERON:0007245!3.54e-10!9;UBERON:0010009!3.54e-10!9;UBERON:0010011!3.54e-10!9;UBERON:0000454!3.54e-10!9;UBERON:0000064!1.45e-09!219;UBERON:0000475!1.48e-09!365;UBERON:0002240!1.43e-08!3;UBERON:0000483!1.62e-08!309;UBERON:0000119!2.22e-08!312;UBERON:0002771!6.04e-08!3;UBERON:0001894!6.72e-08!7;UBERON:0006222!6.72e-08!7;UBERON:0002336!2.22e-07!1;UBERON:0001018!2.22e-07!1;UBERON:0002473!2.22e-07!1;UBERON:0005340!2.22e-07!1;UBERON:0002316!2.22e-07!1;UBERON:0003544!2.22e-07!1;UBERON:0001020!2.22e-07!1;UBERON:0005970!2.22e-07!1;UBERON:0002437!2.22e-07!1;UBERON:0000941!2.99e-07!1;UBERON:0004904!2.99e-07!1;UBERON:0002464!2.99e-07!1;UBERON:0001021!2.99e-07!1;UBERON:0001785!2.99e-07!1;UBERON:0002902!3.17e-07!1;UBERON:0009899!3.17e-07!1;UBERON:0002581!3.36e-07!1;UBERON:0002038!4.51e-07!1;UBERON:0009661!4.51e-07!1;UBERON:0000062!5.31e-07!511;UBERON:0007190!5.37e-07!1;UBERON:0001882!6.38e-07!1;UBERON:0005403!6.38e-07!1;UBERON:0003112!6.76e-07!1;UBERON:0000032!6.76e-07!1;UBERON:0005253!6.76e-07!1;UBERON:0003128!6.76e-07!1;UBERON:0002241!6.76e-07!1;UBERON:0001703!6.76e-07!1;UBERON:0004761!6.76e-07!1;UBERON:0009617!6.76e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.54e-29;2!UBERON:0000122;1.54e-29;2!UBERON:0002298;6.69e-22;6!UBERON:0001896;9.52e-20;3!UBERON:0005290;9.52e-20;3!UBERON:0000073;8.82e-18;53!UBERON:0002616;8.82e-18;53!UBERON:0004732;9.71e-18;13!UBERON:0002780;1.13e-16;41!UBERON:0001890;1.13e-16;41!UBERON:0001893;3.22e-16;34!UBERON:0002336;6.43e-16;1!UBERON:0011215;6.43e-16;1!UBERON:0001018;6.43e-16;1!UBERON:0002473;6.43e-16;1!UBERON:0005340;6.43e-16;1!UBERON:0003544;6.43e-16;1!UBERON:0005970;6.43e-16;1!UBERON:0002316;6.43e-16;1!UBERON:0001020;6.43e-16;1!UBERON:0002437;6.43e-16;1!UBERON:0002581;1.92e-15;1!UBERON:0002902;1.92e-15;1!UBERON:0002038;1.92e-15;1!UBERON:0000941;1.92e-15;1!UBERON:0001785;1.92e-15;1!UBERON:0002464;1.92e-15;1!UBERON:0004904;1.92e-15;1!UBERON:0001021;1.92e-15;1!UBERON:0009661;1.92e-15;1!UBERON:0002950;1.92e-15;1!UBERON:0009899;1.92e-15;1!UBERON:0001891;1.92e-15;1!UBERON:0002791;2.19e-13;32!UBERON:0000955;3.53e-13;68!UBERON:0002021;2.99e-12;5!UBERON:0001017;8.03e-12;75!UBERON:0004733;2.82e-11;12!UBERON:0002028;2.82e-11;12!UBERON:0001950;4.87e-11;20!UBERON:0003528;1.16e-10;34!UBERON:0002020;1.16e-10;34!UBERON:0001869;2.89e-10;32!UBERON:0002619;4.21e-10;22!UBERON:0001016;2.39e-09;83!UBERON:0009663;5.15e-09;7!UBERON:0000956;5.76e-09;25!UBERON:0000203;5.76e-09;25!UBERON:0007023;6.20e-09;114!UBERON:0003714;2.23e-08;2!UBERON:0001875;2.23e-08;2!UBERON:0006514;2.23e-08;2!UBERON:0002420;3.34e-07;9!UBERON:0000125;3.34e-07;9!UBERON:0007245;3.34e-07;9!UBERON:0002308;3.34e-07;9!UBERON:0010009;3.34e-07;9!UBERON:0010011;3.34e-07;9!UBERON:0000454;3.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.32e-34,56;UBERON:0005068,1.32e-34,56;UBERON:0006241,1.32e-34,56;UBERON:0007135,1.32e-34,56;UBERON:0000073,1.32e-30,53;UBERON:0002616,1.32e-30,53;UBERON:0005162,1.08e-29,2;UBERON:0000122,1.08e-29,2;UBERON:0001016,6.79e-29,89;UBERON:0000955,7.10e-28,68;UBERON:0006238,7.10e-28,68;UBERON:0003075,1.23e-27,82;UBERON:0007284,1.23e-27,82;UBERON:0001017,1.41e-27,81;UBERON:0002346,2.59e-26,86;UBERON:0007023,4.32e-23,114;UBERON:0002298,5.80e-22,6;UBERON:0010371,1.34e-21,104;UBERON:0002780,6.50e-21,41;UBERON:0001890,6.50e-21,41;UBERON:0003080,6.50e-21,41;UBERON:0006240,6.50e-21,41;UBERON:0001896,7.88e-20,3;UBERON:0005290,7.88e-20,3;UBERON:0010096,7.88e-20,3;UBERON:0001893,2.72e-19,34;UBERON:0004732,7.99e-18,13;UBERON:0003056,1.14e-17,61;UBERON:0010314,8.61e-17,132;UBERON:0002336,6.44e-16,1;UBERON:0011215,6.44e-16,1;UBERON:0001018,6.44e-16,1;UBERON:0002473,6.44e-16,1;UBERON:0005340,6.44e-16,1;UBERON:0003544,6.44e-16,1;UBERON:0005970,6.44e-16,1;UBERON:0002316,6.44e-16,1;UBERON:0001020,6.44e-16,1;UBERON:0002437,6.44e-16,1;UBERON:0000941,1.34e-15,1;UBERON:0001785,1.34e-15,1;UBERON:0002464,1.34e-15,1;UBERON:0004904,1.34e-15,1;UBERON:0001021,1.34e-15,1;UBERON:0003902,1.34e-15,1;UBERON:0005425,1.34e-15,1;UBERON:0003076,1.47e-15,15;UBERON:0003057,1.47e-15,15;UBERON:0002902,1.54e-15,1;UBERON:0009899,1.54e-15,1;UBERON:0002581,1.78e-15,1;UBERON:0002038,3.66e-15,1;UBERON:0009661,3.66e-15,1;UBERON:0002950,3.66e-15,1;UBERON:0001891,3.66e-15,1;UBERON:0009616,3.66e-15,1;UBERON:0010286,3.66e-15,1;UBERON:0002791,4.21e-15,32;UBERON:0004121,1.09e-14,171;UBERON:0000924,1.09e-14,171;UBERON:0006601,1.09e-14,171;UBERON:0003528,3.16e-14,34;UBERON:0002020,3.16e-14,34;UBERON:0002021,2.25e-12,5;UBERON:0004733,2.63e-11,12;UBERON:0002028,2.63e-11,12;UBERON:0007277,2.63e-11,12;UBERON:0001950,4.38e-11,20;UBERON:0011216,6.13e-11,223;UBERON:0001869,1.02e-10,32;UBERON:0002619,3.82e-10,22;UBERON:0000025,2.34e-09,192;UBERON:0000956,5.30e-09,25;UBERON:0000203,5.30e-09,25;UBERON:0009663,6.31e-09,7;UBERON:0003714,1.86e-08,2;UBERON:0001875,2.31e-08,2;UBERON:0006514,2.31e-08,2;UBERON:0004111,3.26e-07,240;UBERON:0002420,3.90e-07,9;UBERON:0000125,3.90e-07,9;UBERON:0007245,3.90e-07,9;UBERON:0002308,3.90e-07,9;UBERON:0010009,3.90e-07,9;UBERON:0010011,3.90e-07,9;UBERON:0000454,3.90e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.02044907978036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37005664903385,0,3.74823113160543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,1.14681839138014,0.110929051536852,1.80079568530012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0,1.43581454968528,0,1.38314504928436,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0,0.413373593002368,0.951237152908602,0,0,0,0,0,0,0,0,0,0,0,0,2.58284985311961,1.38122824481983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14093547383912,0,0.4226557275834,0,0,0,0,0,0,0,0,0,1.00337708206016,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@GJB1 | |||
}} |
Revision as of 06:00, 23 January 2014
Short description: | p7@GJB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GJB1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -41bp_to_AB590364, BT019329, DQ893515, DQ896494_5end |
EntrezGene: | GJB1 |
HGNC: | 4283 |
UniProt: | P08034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data