FFCP PHASE1:Hg19::chrX:110339367..110339429,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8592 | |||
|TSSclassifier=strong | |||
|UniProt=O75914 | |||
|association_with_transcript=0bp_to_NM_002578,uc004eoz.2_5end | |||
|description=CAGE_peak_1_at_PAK3_5end | |||
|id=chrX:110339367..110339429,+ | |||
|ontology_enrichment_celltype=CL:0000393!1.10e-09!60;CL:0000211!1.10e-09!60;CL:0000187!3.23e-08!54;CL:0000359!9.19e-08!32;CL:0000183!9.37e-08!59;CL:0000192!1.30e-07!42;CL:0000514!1.30e-07!42;CL:0000680!9.11e-07!57;CL:0000056!9.11e-07!57;CL:0000355!9.11e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.68e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.19e-09,61;CL:0000211,1.19e-09,61;CL:0000359,4.39e-08,32;CL:0000187,4.55e-08,55;CL:0000192,3.45e-07,43;CL:0000514,3.45e-07,43;CL:0000680,6.43e-07,58;CL:0000056,6.43e-07,58;CL:0000355,6.43e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.78e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.24e-32!94;UBERON:0001016!5.24e-32!94;UBERON:0005743!1.57e-31!86;UBERON:0001017!6.17e-31!82;UBERON:0003075!5.22e-30!86;UBERON:0007284!5.22e-30!86;UBERON:0002346!5.42e-30!90;UBERON:0001049!8.89e-30!57;UBERON:0005068!8.89e-30!57;UBERON:0006241!8.89e-30!57;UBERON:0007135!8.89e-30!57;UBERON:0007023!8.55e-29!115;UBERON:0002616!1.44e-27!59;UBERON:0000153!1.89e-25!129;UBERON:0007811!1.89e-25!129;UBERON:0000955!2.00e-25!69;UBERON:0006238!2.00e-25!69;UBERON:0000033!4.72e-25!123;UBERON:0003056!6.20e-25!61;UBERON:0003080!2.66e-24!42;UBERON:0002780!3.35e-24!41;UBERON:0001890!3.35e-24!41;UBERON:0006240!3.35e-24!41;UBERON:0000924!8.55e-23!173;UBERON:0006601!8.55e-23!173;UBERON:0004121!1.95e-22!169;UBERON:0000119!2.47e-22!312;UBERON:0000483!3.33e-22!309;UBERON:0002020!9.59e-22!34;UBERON:0003528!9.59e-22!34;UBERON:0001869!1.80e-21!32;UBERON:0000481!2.44e-21!347;UBERON:0001893!2.81e-21!34;UBERON:0000025!4.38e-21!194;UBERON:0002791!1.17e-20!33;UBERON:0004111!1.53e-19!241;UBERON:0000477!4.43e-19!286;UBERON:0000475!7.98e-18!365;UBERON:0000956!2.45e-17!25;UBERON:0000203!2.45e-17!25;UBERON:0002619!6.26e-16!22;UBERON:0001950!1.38e-14!20;UBERON:0000922!8.19e-11!612;UBERON:0000468!2.24e-09!659;UBERON:0002050!6.22e-09!605;UBERON:0005423!6.22e-09!605;UBERON:0000923!1.32e-08!604;UBERON:0005291!1.32e-08!604;UBERON:0006598!1.32e-08!604;UBERON:0002532!1.32e-08!604;UBERON:0000914!3.80e-08!83;UBERON:0002329!3.80e-08!83;UBERON:0003077!3.80e-08!83;UBERON:0003059!3.80e-08!83;UBERON:0007282!3.80e-08!83;UBERON:0009618!3.80e-08!83;UBERON:0007285!3.80e-08!83;UBERON:0000064!9.15e-08!219;UBERON:0002385!1.46e-07!63;UBERON:0001015!1.46e-07!63;UBERON:0000383!1.46e-07!63;UBERON:0001134!2.48e-07!61;UBERON:0002036!2.48e-07!61;UBERON:0003082!2.48e-07!61;UBERON:0000467!3.87e-07!625;UBERON:0000480!4.32e-07!626;UBERON:0004290!4.87e-07!70;UBERON:0003076!8.57e-07!15;UBERON:0003057!8.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.83e-22;32!UBERON:0003528;3.54e-21;34!UBERON:0002020;3.54e-21;34!UBERON:0002791;7.08e-21;32!UBERON:0001893;1.32e-20;34!UBERON:0002780;1.54e-19;41!UBERON:0001890;1.54e-19;41!UBERON:0000956;3.30e-19;25!UBERON:0000203;3.30e-19;25!UBERON:0002619;1.27e-17;22!UBERON:0000073;1.55e-17;53!UBERON:0002616;1.55e-17;53!UBERON:0001950;4.02e-16;20!UBERON:0001017;1.89e-12;75!UBERON:0000955;2.29e-12;68!UBERON:0001016;9.15e-12;83!UBERON:0007023;4.01e-09;114!UBERON:0010314;5.81e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,6.38e-35,82;UBERON:0007284,6.38e-35,82;UBERON:0002346,5.42e-34,86;UBERON:0010314,5.75e-34,132;UBERON:0001049,6.36e-33,56;UBERON:0005068,6.36e-33,56;UBERON:0006241,6.36e-33,56;UBERON:0007135,6.36e-33,56;UBERON:0001017,1.19e-32,81;UBERON:0001016,1.29e-32,89;UBERON:0000073,3.34e-31,53;UBERON:0002616,3.34e-31,53;UBERON:0007023,5.37e-30,114;UBERON:0010371,1.73e-29,104;UBERON:0003056,1.09e-27,61;UBERON:0002780,7.75e-27,41;UBERON:0001890,7.75e-27,41;UBERON:0003080,7.75e-27,41;UBERON:0006240,7.75e-27,41;UBERON:0000955,1.51e-26,68;UBERON:0006238,1.51e-26,68;UBERON:0004121,4.67e-25,171;UBERON:0000924,4.67e-25,171;UBERON:0006601,4.67e-25,171;UBERON:0003528,4.30e-24,34;UBERON:0002020,4.30e-24,34;UBERON:0001869,8.67e-24,32;UBERON:0000119,9.27e-24,309;UBERON:0000483,1.28e-23,306;UBERON:0001893,1.43e-23,34;UBERON:0002791,1.07e-22,32;UBERON:0000025,4.98e-22,192;UBERON:0004111,4.50e-20,240;UBERON:0000956,3.61e-19,25;UBERON:0000203,3.61e-19,25;UBERON:0011216,1.68e-18,223;UBERON:0002619,1.34e-17,22;UBERON:0001950,4.24e-16,20;UBERON:0000922,5.77e-13,592;UBERON:0005423,5.13e-11,581;UBERON:0002050,1.57e-09,564;UBERON:0000923,1.77e-08,560;UBERON:0010316,1.77e-08,560;UBERON:0005291,1.77e-08,560;UBERON:0006598,1.77e-08,560;UBERON:0010317,1.77e-08,560;UBERON:0002532,1.77e-08,560;UBERON:0007524,1.34e-07,73;UBERON:0002385,1.42e-07,64;UBERON:0001015,1.42e-07,64;UBERON:0000383,1.42e-07,64;UBERON:0003077,1.61e-07,72;UBERON:0007285,1.61e-07,72;UBERON:0003076,2.10e-07,15;UBERON:0003057,2.10e-07,15;UBERON:0001134,2.54e-07,62;UBERON:0002036,2.54e-07,62;UBERON:0003082,2.54e-07,62;UBERON:0002329,4.33e-07,71;UBERON:0003059,4.33e-07,71;UBERON:0007282,4.33e-07,71;UBERON:0004290,4.33e-07,71;UBERON:0009618,4.33e-07,71 | |||
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| |||
|short_description=p1@PAK3 | |||
}} |
Revision as of 06:37, 23 January 2014
Short description: | p1@PAK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_002578, uc004eoz.2_5end |
EntrezGene: | PAK3 |
HGNC: | 8592 |
UniProt: | O75914 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.19e-09 | 61 |
electrically active cell | 1.19e-09 | 61 |
vascular associated smooth muscle cell | 4.39e-08 | 32 |
muscle cell | 4.55e-08 | 55 |
smooth muscle cell | 3.45e-07 | 43 |
smooth muscle myoblast | 3.45e-07 | 43 |
muscle precursor cell | 6.43e-07 | 58 |
myoblast | 6.43e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.43e-07 | 58 |