FFCP PHASE1:Hg19::chrX:140271349..140271401,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6548 | |||
|TSSclassifier=strong | |||
|UniProt=O95751 | |||
|association_with_transcript=-39bp_to_ENST00000370526,NM_012317,uc004fbj.2_5end | |||
|description=CAGE_peak_2_at_LDOC1_5end | |||
|id=chrX:140271349..140271401,- | |||
|ontology_enrichment_celltype=CL:0000222!8.74e-15!119;CL:0000055!4.91e-14!180;CL:0000183!6.61e-13!59;CL:0000680!1.06e-11!57;CL:0000056!1.06e-11!57;CL:0000355!1.06e-11!57;CL:0000187!3.57e-11!54;CL:0000359!4.12e-11!32;CL:0000192!7.97e-11!42;CL:0000514!7.97e-11!42;CL:0000393!4.12e-10!60;CL:0000211!4.12e-10!60;CL:0000220!5.00e-10!246;CL:0002321!1.93e-09!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.72e-11;32!CL:0000192;1.51e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.15e-15,121;CL:0000680,5.07e-12,58;CL:0000056,5.07e-12,58;CL:0000355,5.07e-12,58;CL:0000187,1.75e-11,55;CL:0000359,2.90e-11,32;CL:0000192,4.04e-11,43;CL:0000514,4.04e-11,43;CL:0000393,1.46e-10,61;CL:0000211,1.46e-10,61;CL:0002321,1.91e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.51e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;5.80e-16;34!UBERON:0001869;1.12e-15;32!UBERON:0002780;1.55e-15;41!UBERON:0001890;1.55e-15;41!UBERON:0003528;1.72e-15;34!UBERON:0002020;1.72e-15;34!UBERON:0002791;1.73e-15;32!UBERON:0000073;1.94e-14;53!UBERON:0002616;1.94e-14;53!UBERON:0002619;3.42e-14;22!UBERON:0000956;4.13e-13;25!UBERON:0000203;4.13e-13;25!UBERON:0001950;5.13e-13;20!UBERON:0001017;1.33e-10;75!UBERON:0000955;1.42e-10;68!UBERON:0001637;1.72e-10;42!UBERON:0003509;1.72e-10;42!UBERON:0004572;1.72e-10;42!UBERON:0004573;4.99e-10;33!UBERON:0004571;4.99e-10;33!UBERON:0007500;2.52e-09;56!UBERON:0001981;2.52e-09;56!UBERON:0004537;2.52e-09;56!UBERON:0003914;1.43e-08;74!UBERON:0001016;3.08e-08;83!UBERON:0000947;3.07e-07;21!UBERON:0010191;3.07e-07;21!UBERON:0010314;3.97e-07;132!UBERON:0002420;6.56e-07;9!UBERON:0007245;6.56e-07;9!UBERON:0010009;6.56e-07;9!UBERON:0010011;6.56e-07;9!UBERON:0000454;6.56e-07;9!UBERON:0000055;8.71e-07;65 | |||
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| |||
|short_description=p2@LDOC1 | |||
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Revision as of 07:15, 23 January 2014
Short description: | p2@LDOC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LDOC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000370526, NM_012317, uc004fbj.2_5end |
EntrezGene: | LDOC1 |
HGNC: | 6548 |
UniProt: | O95751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 2.15e-15 | 121 |
muscle precursor cell | 5.07e-12 | 58 |
myoblast | 5.07e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.07e-12 | 58 |
muscle cell | 1.75e-11 | 55 |
vascular associated smooth muscle cell | 2.90e-11 | 32 |
smooth muscle cell | 4.04e-11 | 43 |
smooth muscle myoblast | 4.04e-11 | 43 |
electrically responsive cell | 1.46e-10 | 61 |
electrically active cell | 1.46e-10 | 61 |
embryonic cell | 1.91e-10 | 250 |