FFCP PHASE1:Hg19::chr14:39417473..39417480,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000553932,uc001wun.2,uc001wuo.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_ENST00000553932_5end,CAGE_peak_1_at_uc001wun.2_5end,CAGE_peak_1_at_uc001wuo.2_5end | |||
|id=chr14:39417473..39417480,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.62e-18;3!UBERON:0003057;1.62e-18;3!UBERON:0005425;6.21e-15;1!UBERON:0006601;1.66e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.43e-83!57;UBERON:0005068!3.43e-83!57;UBERON:0006241!3.43e-83!57;UBERON:0007135!3.43e-83!57;UBERON:0002616!8.08e-71!59;UBERON:0002020!3.51e-63!34;UBERON:0003528!3.51e-63!34;UBERON:0001893!6.22e-63!34;UBERON:0000955!3.85e-62!69;UBERON:0006238!3.85e-62!69;UBERON:0005743!4.00e-61!86;UBERON:0001017!4.21e-61!82;UBERON:0002780!9.45e-61!41;UBERON:0001890!9.45e-61!41;UBERON:0006240!9.45e-61!41;UBERON:0007023!1.01e-60!115;UBERON:0002791!6.42e-60!33;UBERON:0003080!3.56e-59!42;UBERON:0003075!1.27e-58!86;UBERON:0007284!1.27e-58!86;UBERON:0000073!7.56e-58!94;UBERON:0001016!7.56e-58!94;UBERON:0001869!5.25e-56!32;UBERON:0002346!1.22e-55!90;UBERON:0003056!5.50e-42!61;UBERON:0002619!3.42e-39!22;UBERON:0000956!1.13e-38!25;UBERON:0000203!1.13e-38!25;UBERON:0001950!1.01e-37!20;UBERON:0000153!1.21e-37!129;UBERON:0007811!1.21e-37!129;UBERON:0000033!1.39e-35!123;UBERON:0004121!1.86e-28!169;UBERON:0000924!1.36e-27!173;UBERON:0006601!1.36e-27!173;UBERON:0002420!3.68e-27!9;UBERON:0007245!3.68e-27!9;UBERON:0010009!3.68e-27!9;UBERON:0010011!3.68e-27!9;UBERON:0000454!3.68e-27!9;UBERON:0002308!4.51e-27!9;UBERON:0000125!4.51e-27!9;UBERON:0003076!5.61e-24!15;UBERON:0003057!5.61e-24!15;UBERON:0002298!1.86e-23!8;UBERON:0004732!1.43e-22!13;UBERON:0000025!4.69e-21!194;UBERON:0009663!4.78e-20!7;UBERON:0004733!3.21e-19!12;UBERON:0002028!3.21e-19!12;UBERON:0007277!3.21e-19!12;UBERON:0001871!2.70e-17!7;UBERON:0004111!2.80e-16!241;UBERON:0000200!6.95e-16!6;UBERON:0000477!4.36e-14!286;UBERON:0000064!5.64e-14!219;UBERON:0000483!3.10e-13!309;UBERON:0000349!5.10e-13!5;UBERON:0000119!5.14e-13!312;UBERON:0006331!1.06e-12!3;UBERON:0002771!1.15e-12!3;UBERON:0000988!1.76e-12!3;UBERON:0001896!2.13e-12!3;UBERON:0005290!2.13e-12!3;UBERON:0010096!2.13e-12!3;UBERON:0001872!2.60e-12!5;UBERON:0000475!1.83e-10!365;UBERON:0002680!2.39e-10!9;UBERON:0001895!2.39e-10!9;UBERON:0010092!2.39e-10!9;UBERON:0001875!1.85e-09!2;UBERON:0006514!1.85e-09!2;UBERON:0005162!2.77e-09!2;UBERON:0000122!2.77e-09!2;UBERON:0000369!4.37e-09!4;UBERON:0002435!4.37e-09!4;UBERON:0000204!4.37e-09!4;UBERON:0010082!4.37e-09!4;UBERON:0001876!5.86e-09!2;UBERON:0002148!7.40e-09!2;UBERON:0009662!7.40e-09!2;UBERON:0000062!4.19e-08!511;UBERON:0002021!1.57e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;3.59e-28;2!UBERON:0006514;3.59e-28;2!UBERON:0005162;1.22e-27;2!UBERON:0000122;1.22e-27;2!UBERON:0002420;3.09e-24;9!UBERON:0000125;3.09e-24;9!UBERON:0007245;3.09e-24;9!UBERON:0002308;3.09e-24;9!UBERON:0010009;3.09e-24;9!UBERON:0010011;3.09e-24;9!UBERON:0000454;3.09e-24;9!UBERON:0002780;1.59e-22;41!UBERON:0001890;1.59e-22;41!UBERON:0001893;2.04e-22;34!UBERON:0000073;9.91e-22;53!UBERON:0002616;9.91e-22;53!UBERON:0003528;1.98e-21;34!UBERON:0002020;1.98e-21;34!UBERON:0002791;1.20e-19;32!UBERON:0002240;1.62e-18;3!UBERON:0005174;1.62e-18;3!UBERON:0001137;1.62e-18;3!UBERON:0009663;4.16e-18;7!UBERON:0001869;2.68e-15;32!UBERON:0002038;6.21e-15;1!UBERON:0000941;6.21e-15;1!UBERON:0001785;6.21e-15;1!UBERON:0002464;6.21e-15;1!UBERON:0004904;6.21e-15;1!UBERON:0001021;6.21e-15;1!UBERON:0009661;6.21e-15;1!UBERON:0002950;6.21e-15;1!UBERON:0001891;6.21e-15;1!UBERON:0002336;1.61e-14;1!UBERON:0011215;1.61e-14;1!UBERON:0001018;1.61e-14;1!UBERON:0002473;1.61e-14;1!UBERON:0005340;1.61e-14;1!UBERON:0003544;1.61e-14;1!UBERON:0005970;1.61e-14;1!UBERON:0002316;1.61e-14;1!UBERON:0001020;1.61e-14;1!UBERON:0002437;1.61e-14;1!UBERON:0002619;2.70e-14;22!UBERON:0001016;8.69e-14;83!UBERON:0001017;9.55e-13;75!UBERON:0000956;1.20e-12;25!UBERON:0000203;1.20e-12;25!UBERON:0000349;1.66e-11;5!UBERON:0001950;2.57e-10;20!UBERON:0000955;6.07e-10;68!UBERON:0004732;8.14e-10;13!UBERON:0000200;9.67e-10;6!UBERON:0002298;9.67e-10;6!UBERON:0001871;1.78e-08;6!UBERON:0007023;1.85e-08;114!UBERON:0003714;4.08e-08;2!UBERON:0002771;6.57e-08;2!UBERON:0001876;6.57e-08;2!UBERON:0001897;6.57e-08;2!UBERON:0001954;6.57e-08;2!UBERON:0002148;6.57e-08;2!UBERON:0002702;6.57e-08;2!UBERON:0006331;6.57e-08;2!UBERON:0009662;6.57e-08;2!UBERON:0003022;6.57e-08;2!UBERON:0002421;6.57e-08;2!UBERON:0010225;6.57e-08;2!UBERON:0002600;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.70e-44,56;UBERON:0005068,7.70e-44,56;UBERON:0006241,7.70e-44,56;UBERON:0007135,7.70e-44,56;UBERON:0003075,2.42e-34,82;UBERON:0007284,2.42e-34,82;UBERON:0000073,7.53e-34,53;UBERON:0002616,7.53e-34,53;UBERON:0002346,1.06e-32,86;UBERON:0001016,7.51e-31,89;UBERON:0002780,1.70e-30,41;UBERON:0001890,1.70e-30,41;UBERON:0003080,1.70e-30,41;UBERON:0006240,1.70e-30,41;UBERON:0001893,9.21e-30,34;UBERON:0003528,1.02e-29,34;UBERON:0002020,1.02e-29,34;UBERON:0001017,1.07e-29,81;UBERON:0001875,3.60e-28,2;UBERON:0006514,3.60e-28,2;UBERON:0005162,1.40e-27,2;UBERON:0000122,1.40e-27,2;UBERON:0010371,7.34e-27,104;UBERON:0000955,7.80e-26,68;UBERON:0006238,7.80e-26,68;UBERON:0002791,4.55e-25,32;UBERON:0003056,9.79e-25,61;UBERON:0002420,2.44e-24,9;UBERON:0007245,2.44e-24,9;UBERON:0010009,2.44e-24,9;UBERON:0010011,2.44e-24,9;UBERON:0000454,2.44e-24,9;UBERON:0000125,4.42e-24,9;UBERON:0002308,4.42e-24,9;UBERON:0007023,2.66e-21,114;UBERON:0010314,6.62e-21,132;UBERON:0001869,3.16e-19,32;UBERON:0002240,1.36e-18,3;UBERON:0005174,1.36e-18,3;UBERON:0001137,1.36e-18,3;UBERON:0009663,4.42e-18,7;UBERON:0004121,1.26e-15,171;UBERON:0000924,1.26e-15,171;UBERON:0006601,1.26e-15,171;UBERON:0000941,5.42e-15,1;UBERON:0001785,5.42e-15,1;UBERON:0002464,5.42e-15,1;UBERON:0004904,5.42e-15,1;UBERON:0001021,5.42e-15,1;UBERON:0003902,5.42e-15,1;UBERON:0005425,5.42e-15,1;UBERON:0002038,7.13e-15,1;UBERON:0009661,7.13e-15,1;UBERON:0002950,7.13e-15,1;UBERON:0001891,7.13e-15,1;UBERON:0009616,7.13e-15,1;UBERON:0010286,7.13e-15,1;UBERON:0002336,2.11e-14,1;UBERON:0011215,2.11e-14,1;UBERON:0001018,2.11e-14,1;UBERON:0002473,2.11e-14,1;UBERON:0005340,2.11e-14,1;UBERON:0003544,2.11e-14,1;UBERON:0005970,2.11e-14,1;UBERON:0002316,2.11e-14,1;UBERON:0001020,2.11e-14,1;UBERON:0002437,2.11e-14,1;UBERON:0002619,2.41e-14,22;UBERON:0003076,3.07e-14,15;UBERON:0003057,3.07e-14,15;UBERON:0000956,1.09e-12,25;UBERON:0000203,1.09e-12,25;UBERON:0000025,6.32e-12,192;UBERON:0000349,1.15e-11,5;UBERON:0011216,1.32e-11,223;UBERON:0001950,2.45e-10,20;UBERON:0000200,9.26e-10,6;UBERON:0004732,1.01e-09,13;UBERON:0002298,1.37e-09,6;UBERON:0004111,3.18e-09,240;UBERON:0001871,1.42e-08,6;UBERON:0003714,3.82e-08,2;UBERON:0000483,3.85e-08,306;UBERON:0001876,4.69e-08,2;UBERON:0000119,4.79e-08,309;UBERON:0001897,5.02e-08,2;UBERON:0010225,5.02e-08,2;UBERON:0001954,5.74e-08,2;UBERON:0003022,5.74e-08,2;UBERON:0002421,5.74e-08,2;UBERON:0002600,5.74e-08,2;UBERON:0002771,6.15e-08,2;UBERON:0002702,6.58e-08,2;UBERON:0002148,9.19e-08,2;UBERON:0006331,9.19e-08,2;UBERON:0009662,9.19e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34802265961354,0.802577647298789,0.937057782901357,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,2.19048606227189,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,1.63444087333891,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.502291168478,0.573409195690071,1.33114861844223,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,1.27707087245721,0.615349092722265,0,0.553258019713743,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.883606528698812,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,1.76677620403451,1.48523200163543,0,0,0,0,0,0,0,0,0,0,2.00675416412032,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,1.86179392551411,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000553932,p1@uc001wun.2,p1@uc001wuo.2 | |||
}} |
Revision as of 19:51, 11 January 2014
Short description: | p1@ENST00000553932, p1@uc001wun.2, p1@uc001wuo.2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000553932_5end, CAGE_peak_1_at_uc001wun.2_5end, CAGE_peak_1_at_uc001wuo.2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000553932, uc001wun.2, uc001wuo.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data