FFCP PHASE1:Hg19::chr18:40857447..40857461,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=2bp_to_uc010dng.2_5end | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_1_at_SYT4_5end | |||
|id=chr18:40857447..40857461,- | |||
|ontology_enrichment_celltype=CL:0000047!1.07e-08!8;CL:0000540!1.15e-08!6;CL:0000031!1.15e-08!6;CL:0000404!1.15e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000333;8.89e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.46e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.95e-20;82!UBERON:0006215;4.84e-08;3 | |||
|ontology_enrichment_disease=DOID:171!1.27e-10!10;DOID:169!8.32e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:171;2.22e-09;10!DOID:169;1.06e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.10e-09,10;DOID:169,1.06e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.99e-67!94;UBERON:0001016!4.99e-67!94;UBERON:0001017!1.73e-64!82;UBERON:0001049!3.37e-63!57;UBERON:0005068!3.37e-63!57;UBERON:0006241!3.37e-63!57;UBERON:0007135!3.37e-63!57;UBERON:0005743!1.34e-62!86;UBERON:0002616!7.54e-53!59;UBERON:0002780!2.19e-52!41;UBERON:0001890!2.19e-52!41;UBERON:0006240!2.19e-52!41;UBERON:0003080!8.19e-51!42;UBERON:0000955!1.99e-50!69;UBERON:0006238!1.99e-50!69;UBERON:0002346!8.35e-50!90;UBERON:0007023!1.38e-49!115;UBERON:0003075!2.59e-47!86;UBERON:0007284!2.59e-47!86;UBERON:0002020!9.04e-43!34;UBERON:0003528!9.04e-43!34;UBERON:0001893!1.32e-42!34;UBERON:0002791!3.44e-41!33;UBERON:0001869!1.29e-40!32;UBERON:0000924!8.49e-37!173;UBERON:0006601!8.49e-37!173;UBERON:0003056!1.31e-35!61;UBERON:0004121!1.40e-34!169;UBERON:0002619!6.01e-32!22;UBERON:0000956!8.13e-32!25;UBERON:0000203!8.13e-32!25;UBERON:0001950!2.04e-29!20;UBERON:0000153!1.13e-26!129;UBERON:0007811!1.13e-26!129;UBERON:0000033!7.40e-26!123;UBERON:0000025!1.42e-16!194;UBERON:0003076!3.06e-13!15;UBERON:0003057!3.06e-13!15;UBERON:0002308!3.13e-12!9;UBERON:0000125!3.13e-12!9;UBERON:0002420!3.75e-12!9;UBERON:0007245!3.75e-12!9;UBERON:0010009!3.75e-12!9;UBERON:0010011!3.75e-12!9;UBERON:0000454!3.75e-12!9;UBERON:0004111!7.84e-12!241;UBERON:0001871!1.07e-11!7;UBERON:0001894!5.22e-11!7;UBERON:0006222!5.22e-11!7;UBERON:0004732!7.00e-11!13;UBERON:0000064!4.68e-10!219;UBERON:0004733!8.10e-10!12;UBERON:0002028!8.10e-10!12;UBERON:0007277!8.10e-10!12;UBERON:0009663!1.13e-09!7;UBERON:0000477!1.30e-09!286;UBERON:0000200!1.30e-09!6;UBERON:0000922!4.13e-09!612;UBERON:0000483!4.72e-09!309;UBERON:0002298!8.52e-09!8;UBERON:0000119!8.86e-09!312;UBERON:0001872!2.24e-08!5;UBERON:0002021!2.42e-08!5;UBERON:0000349!5.62e-08!5;UBERON:0002050!9.09e-08!605;UBERON:0005423!9.09e-08!605;UBERON:0003296!1.44e-07!4;UBERON:0010133!1.44e-07!4;UBERON:0000923!1.98e-07!604;UBERON:0005291!1.98e-07!604;UBERON:0006598!1.98e-07!604;UBERON:0002532!1.98e-07!604;UBERON:0000013!2.34e-07!5;UBERON:0002410!2.34e-07!5;UBERON:0000481!4.52e-07!347;UBERON:0000475!5.78e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.73e-46;41!UBERON:0001890;7.73e-46;41!UBERON:0001869;1.45e-45;32!UBERON:0002619;1.89e-44;22!UBERON:0003528;9.78e-44;34!UBERON:0002020;9.78e-44;34!UBERON:0001893;1.72e-43;34!UBERON:0002791;1.25e-42;32!UBERON:0000073;1.46e-42;53!UBERON:0002616;1.46e-42;53!UBERON:0001950;7.21e-41;20!UBERON:0000956;1.79e-38;25!UBERON:0000203;1.79e-38;25!UBERON:0001017;5.69e-31;75!UBERON:0000955;3.94e-30;68!UBERON:0001016;4.11e-29;83!UBERON:0004732;3.49e-15;13!UBERON:0001894;7.22e-15;7!UBERON:0001871;4.97e-14;6!UBERON:0004733;1.13e-13;12!UBERON:0002028;1.13e-13;12!UBERON:0000125;1.80e-13;9!UBERON:0002308;1.80e-13;9!UBERON:0002420;2.20e-13;9!UBERON:0007245;2.20e-13;9!UBERON:0010009;2.20e-13;9!UBERON:0010011;2.20e-13;9!UBERON:0000454;2.20e-13;9!UBERON:0000200;6.74e-13;6!UBERON:0007023;8.05e-13;114!UBERON:0002298;1.32e-12;6!UBERON:0011216;2.67e-12;132!UBERON:0001872;3.73e-11;5!UBERON:0002021;3.89e-11;5!UBERON:0000349;1.40e-10;5!UBERON:0003296;5.03e-10;4!UBERON:0010133;5.03e-10;4!UBERON:0009663;5.61e-10;7!UBERON:0002784;3.76e-09;4!UBERON:0000369;8.38e-09;4!UBERON:0002435;8.38e-09;4!UBERON:0000204;8.38e-09;4!UBERON:0002680;9.38e-09;9!UBERON:0001895;9.38e-09;9!UBERON:0001870;1.78e-07;3!UBERON:0000988;3.00e-07;3!UBERON:0001896;5.23e-07;3!UBERON:0005290;5.23e-07;3!UBERON:0010314;5.52e-07;132!UBERON:0005383;7.12e-07;3!UBERON:0005382;7.12e-07;3!UBERON:0000013;8.89e-07;5!UBERON:0002410;8.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.12e-86,89;UBERON:0001049,2.35e-82,56;UBERON:0005068,2.35e-82,56;UBERON:0006241,2.35e-82,56;UBERON:0007135,2.35e-82,56;UBERON:0001017,6.62e-82,81;UBERON:0000073,6.30e-77,53;UBERON:0002616,6.30e-77,53;UBERON:0000955,2.96e-67,68;UBERON:0006238,2.96e-67,68;UBERON:0002780,4.00e-64,41;UBERON:0001890,4.00e-64,41;UBERON:0003080,4.00e-64,41;UBERON:0006240,4.00e-64,41;UBERON:0002346,8.94e-58,86;UBERON:0003075,2.68e-56,82;UBERON:0007284,2.68e-56,82;UBERON:0001869,8.67e-51,32;UBERON:0003528,9.49e-51,34;UBERON:0002020,9.49e-51,34;UBERON:0001893,1.55e-50,34;UBERON:0002791,4.67e-47,32;UBERON:0010371,4.59e-45,104;UBERON:0002619,1.96e-44,22;UBERON:0003056,3.87e-44,61;UBERON:0004121,3.99e-44,171;UBERON:0000924,3.99e-44,171;UBERON:0006601,3.99e-44,171;UBERON:0001950,7.45e-41,20;UBERON:0007023,1.84e-39,114;UBERON:0000956,1.84e-38,25;UBERON:0000203,1.84e-38,25;UBERON:0011216,2.42e-34,223;UBERON:0010314,3.77e-32,132;UBERON:0003076,1.52e-18,15;UBERON:0003057,1.52e-18,15;UBERON:0000025,1.07e-17,192;UBERON:0004732,3.38e-15,13;UBERON:0001894,7.30e-15,7;UBERON:0006222,7.30e-15,7;UBERON:0001871,4.88e-14,6;UBERON:0004733,1.08e-13,12;UBERON:0002028,1.08e-13,12;UBERON:0007277,1.08e-13,12;UBERON:0000125,1.70e-13,9;UBERON:0002308,1.70e-13,9;UBERON:0002420,2.14e-13,9;UBERON:0007245,2.14e-13,9;UBERON:0010009,2.14e-13,9;UBERON:0010011,2.14e-13,9;UBERON:0000454,2.14e-13,9;UBERON:0000200,6.74e-13,6;UBERON:0002298,1.26e-12,6;UBERON:0004111,5.26e-12,240;UBERON:0001872,3.69e-11,5;UBERON:0002021,4.10e-11,5;UBERON:0000349,1.34e-10,5;UBERON:0003296,5.03e-10,4;UBERON:0010133,5.03e-10,4;UBERON:0009663,5.61e-10,7;UBERON:0000483,3.70e-09,306;UBERON:0002784,3.76e-09,4;UBERON:0000119,6.24e-09,309;UBERON:0000369,8.46e-09,4;UBERON:0002435,8.46e-09,4;UBERON:0000204,8.46e-09,4;UBERON:0010082,8.46e-09,4;UBERON:0002680,9.07e-09,9;UBERON:0001895,9.07e-09,9;UBERON:0010092,9.07e-09,9;UBERON:0001870,1.82e-07,3;UBERON:0000988,2.85e-07,3;UBERON:0001896,5.23e-07,3;UBERON:0005290,5.23e-07,3;UBERON:0010096,5.23e-07,3;UBERON:0000922,5.99e-07,592;UBERON:0005383,7.27e-07,3;UBERON:0005382,7.27e-07,3;UBERON:0000013,8.89e-07,5;UBERON:0002410,8.89e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,4.14644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.824469933283,42.5308847027732,177.399724989075,51.0351001322531,0,0,0,0,0,0,0,0,0,0,0,0,3.10419213877515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.84198648969,9.84685914873589,0,0,0,1.39473591775749,0.276283915531148,97.4979734196048,0,0,0,0,0,0,0.591860433821602,0,0,9.69332746095218,33.4892834364283,81.8416571804896,0,0,0,0,0,0,7.23961083807076,10.7893706951804,5.72962483279864,15.9433449446491,11.6978545466646,109.8588501483,143.200141610936,126.198833293165,43.6576940336405,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,3.66618086960175,0,0,0,3.16785325009182,2.40773294189637,13.118808960619,0,0,0,0,1.20990716048664,92.433974012408,1.0741718536843,0.751617097072463,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,10.8470755574656,0,0,50.8385691525706,0,0.0801588202515337,0,0,0,0,183.263457716578,0,0,0,0,0,0,0,9.00630433064684,1.64286454670392,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,24.6521203840884,11.3048827072608,0.482259445395058,1.51293380256957,0.415440338029185,0,0,37.1179791180531,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,16.8067843270016,24.727496525883,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,46.0755453582833,38.4382734441184,22.53436752717,13.7618206965617,17.0830739366753,27.3845136971501,3.04366996859708,0,0,0,0,9.83503302194451,16.5209972616341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7292707743594,0,0,0,0,0,0,0,0,1.20550485762571,0,0,0.139879507719444,0,28.5204448007143,5.17559094704073,5.81883984866817,23.916910764051,0,1.91317428091515,65.4380835287532,0.558644917973244,0,0,256.18263945135,0,0,33.8488016258342,29.7562810283728,12.4514410064578,39.7925746627065,274.001933793008,16.1136398241628,22.6065903884592,5.71077681036618,0,0,0,0,0,0,0,0.676892955143315,0,2.34454203369928,0,0,0,37.0105963708803,24.2134210570293,17.3616909060995,31.32741023579,147.136223625901,0,0,0.351742488719241,0,141.960986507746,177.22152160932,47.3433171304573,58.9645075599861,0,0,0,47.1709946859212,22.9546979734343,0,0,0.235479278551542,24.1958008470643,0,3.65263488203798,0,0,3.4308741204795,0,0,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0,0,0,0,0,0,0,0,5.37167092935694,0.594600453887843,0.11294608203896,5.71690687076231,100.390290971838,0.308696632431779,0.655678681511872,4.23285566725371,0.245148321753905,68.8175517536748,16.8825281718853,6.53502080719589,13.5249832826688,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0.430018749454354,0,17.6097959594469,160.140703354919,3.1741610430924,0,0,0,0,0,2.78736702225161,0.101988829741982,0,0,0,0.0757786982182394,0,16.5833887891756,3.62015485516633,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0.358611026963382,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0.805095174364105,0 | |||
|short_description=p1@SYT4 | |||
}} |
Revision as of 19:10, 20 January 2014
Short description: | p1@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 2bp_to_uc010dng.2_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.46e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.10e-09 | 10 |
neuroendocrine tumor | 1.06e-08 | 6 |