FFCP PHASE1:Hg19::chr5:132166579..132166616,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24084 | |||
|TSSclassifier=strong | |||
|UniProt=Q2M3G4 | |||
|association_with_transcript=0bp_to_ENST00000378679,NM_001172700,uc003kxx.2_5end | |||
|description=CAGE_peak_2_at_SHROOM1_5end | |||
|id=chr5:132166579..132166616,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.63e-08;12!CL:0000097;9.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.13e-08,12;CL:0000097,9.84e-07,5;CL:0002028,9.84e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.40e-20!57;UBERON:0005068!2.40e-20!57;UBERON:0006241!2.40e-20!57;UBERON:0007135!2.40e-20!57;UBERON:0004111!4.97e-20!241;UBERON:0005743!1.04e-19!86;UBERON:0000477!5.73e-19!286;UBERON:0000955!1.28e-18!69;UBERON:0006238!1.28e-18!69;UBERON:0001017!1.79e-18!82;UBERON:0000073!4.43e-18!94;UBERON:0001016!4.43e-18!94;UBERON:0002616!5.75e-18!59;UBERON:0003075!8.47e-18!86;UBERON:0007284!8.47e-18!86;UBERON:0007023!1.37e-17!115;UBERON:0000033!6.69e-17!123;UBERON:0000025!1.39e-16!194;UBERON:0000481!3.24e-16!347;UBERON:0002346!6.36e-16!90;UBERON:0002780!1.58e-15!41;UBERON:0001890!1.58e-15!41;UBERON:0006240!1.58e-15!41;UBERON:0000153!1.86e-15!129;UBERON:0007811!1.86e-15!129;UBERON:0000480!8.45e-15!626;UBERON:0003080!1.15e-14!42;UBERON:0000922!1.17e-14!612;UBERON:0000467!1.52e-14!625;UBERON:0000062!1.55e-14!511;UBERON:0002050!4.98e-14!605;UBERON:0005423!4.98e-14!605;UBERON:0000923!7.25e-14!604;UBERON:0005291!7.25e-14!604;UBERON:0006598!7.25e-14!604;UBERON:0002532!7.25e-14!604;UBERON:0004121!7.46e-14!169;UBERON:0000475!7.88e-14!365;UBERON:0000468!1.71e-13!659;UBERON:0002020!3.55e-13!34;UBERON:0003528!3.55e-13!34;UBERON:0000483!4.17e-13!309;UBERON:0001893!4.35e-13!34;UBERON:0000119!7.82e-13!312;UBERON:0000924!8.35e-13!173;UBERON:0006601!8.35e-13!173;UBERON:0002791!1.38e-12!33;UBERON:0001869!9.09e-12!32;UBERON:0003056!1.78e-11!61;UBERON:0000956!2.67e-08!25;UBERON:0000203!2.67e-08!25;UBERON:0002619!1.02e-07!22;UBERON:0003076!5.72e-07!15;UBERON:0003057!5.72e-07!15;UBERON:0005172!6.92e-07!55;UBERON:0005173!6.92e-07!55;UBERON:0002308!8.45e-07!9;UBERON:0000125!8.45e-07!9;UBERON:0000064!9.33e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.56e-26;34!UBERON:0003528;1.98e-25;34!UBERON:0002020;1.98e-25;34!UBERON:0002791;1.29e-24;32!UBERON:0002780;2.03e-24;41!UBERON:0001890;2.03e-24;41!UBERON:0001869;2.94e-24;32!UBERON:0000073;5.00e-22;53!UBERON:0002616;5.00e-22;53!UBERON:0002619;1.52e-21;22!UBERON:0000956;1.25e-20;25!UBERON:0000203;1.25e-20;25!UBERON:0001950;2.73e-18;20!UBERON:0000955;3.95e-13;68!UBERON:0001017;2.45e-12;75!UBERON:0000125;2.62e-12;9!UBERON:0002308;2.62e-12;9!UBERON:0002298;2.63e-12;6!UBERON:0001016;9.86e-10;83!UBERON:0007023;1.88e-09;114!UBERON:0002420;2.63e-09;9!UBERON:0007245;2.63e-09;9!UBERON:0010009;2.63e-09;9!UBERON:0010011;2.63e-09;9!UBERON:0000454;2.63e-09;9!UBERON:0009663;6.38e-09;7!UBERON:0002107;1.45e-07;19!UBERON:0006925;1.45e-07;19!UBERON:0001896;4.07e-07;3!UBERON:0005290;4.07e-07;3!UBERON:0000200;4.87e-07;6!UBERON:0004732;7.44e-07;13!UBERON:0000988;7.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.95e-40,56;UBERON:0005068,3.95e-40,56;UBERON:0006241,3.95e-40,56;UBERON:0007135,3.95e-40,56;UBERON:0000073,7.87e-38,53;UBERON:0002616,7.87e-38,53;UBERON:0002780,4.99e-34,41;UBERON:0001890,4.99e-34,41;UBERON:0003080,4.99e-34,41;UBERON:0006240,4.99e-34,41;UBERON:0000955,1.28e-33,68;UBERON:0006238,1.28e-33,68;UBERON:0003075,2.00e-33,82;UBERON:0007284,2.00e-33,82;UBERON:0003528,1.96e-31,34;UBERON:0002020,1.96e-31,34;UBERON:0002346,3.09e-31,86;UBERON:0001893,3.34e-31,34;UBERON:0001017,6.84e-30,81;UBERON:0007023,7.55e-30,114;UBERON:0002791,3.87e-28,32;UBERON:0001869,1.01e-27,32;UBERON:0001016,2.85e-27,89;UBERON:0003056,7.66e-27,61;UBERON:0010371,9.15e-25,104;UBERON:0004111,1.81e-24,240;UBERON:0002619,1.42e-21,22;UBERON:0000025,2.60e-21,192;UBERON:0010314,5.62e-21,132;UBERON:0000956,1.55e-20,25;UBERON:0000203,1.55e-20,25;UBERON:0011216,4.86e-20,223;UBERON:0001950,2.40e-18,20;UBERON:0004121,1.21e-16,171;UBERON:0000924,1.21e-16,171;UBERON:0006601,1.21e-16,171;UBERON:0000483,1.21e-13,306;UBERON:0000119,2.50e-13,309;UBERON:0000125,1.02e-12,9;UBERON:0002308,1.02e-12,9;UBERON:0002298,2.01e-12,6;UBERON:0005423,1.23e-09,581;UBERON:0002420,1.30e-09,9;UBERON:0007245,1.30e-09,9;UBERON:0010009,1.30e-09,9;UBERON:0010011,1.30e-09,9;UBERON:0000454,1.30e-09,9;UBERON:0000922,1.79e-09,592;UBERON:0000923,2.83e-09,560;UBERON:0010316,2.83e-09,560;UBERON:0005291,2.83e-09,560;UBERON:0006598,2.83e-09,560;UBERON:0010317,2.83e-09,560;UBERON:0002532,2.83e-09,560;UBERON:0009663,2.89e-09,7;UBERON:0002050,4.91e-09,564;UBERON:0003076,1.11e-07,15;UBERON:0003057,1.11e-07,15;UBERON:0002107,1.72e-07,19;UBERON:0006925,1.72e-07,19;UBERON:0008836,1.72e-07,19;UBERON:0000200,3.09e-07,6;UBERON:0001896,3.91e-07,3;UBERON:0005290,3.91e-07,3;UBERON:0010096,3.91e-07,3;UBERON:0005172,4.41e-07,54;UBERON:0005173,4.41e-07,54;UBERON:0004732,6.01e-07,13;UBERON:0000988,6.12e-07,3 | |||
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| |||
|short_description=p2@SHROOM1 | |||
}} |
Revision as of 07:23, 22 January 2014
Short description: | p2@SHROOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHROOM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378679, NM_001172700, uc003kxx.2_5end |
EntrezGene: | SHROOM1 |
HGNC: | 24084 |
UniProt: | Q2M3G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.13e-08 | 12 |
mast cell | 9.84e-07 | 5 |
basophil mast progenitor cell | 9.84e-07 | 5 |