FFCP PHASE1:Hg19::chr13:95365715..95365734,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:95365715..95365734,-
|short_description=p@chr13:95365715..95365734,-
|description=CAGE_peak_at_chr13:95365715..95365734,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:95365715..95365734,- | |||
|coexpression_cluster_id=C2273 | |||
|description=CAGE_peak_at_chr13:95365715..95365734,- | |||
|id=chr13:95365715..95365734,- | |||
|ontology_enrichment_celltype=CL:0002319!8.29e-13!25;CL:0000047!2.29e-09!8;CL:0002322!2.99e-09!5;CL:0000128!1.60e-08!7;CL:0000126!1.60e-08!7;CL:0000127!1.60e-08!7;CL:0002453!1.60e-08!7;CL:0000133!2.67e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.35e-15;5!CL:0002319;1.78e-11;25!CL:0000128;4.73e-11;7!CL:0000126;4.73e-11;7!CL:0000127;4.73e-11;7!CL:0002605;1.52e-10;3!CL:0000047;1.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.03e-15,5;CL:0002319,1.70e-11,25;CL:0000128,3.55e-11,7;CL:0000126,3.55e-11,7;CL:0000127,3.55e-11,7;CL:0002453,3.55e-11,7;CL:0002605,1.55e-10,3;CL:0000047,1.19e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.66e-12;82!UBERON:0006241;2.63e-09;3!UBERON:0003057;2.63e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.21e-42;34!UBERON:0002791;7.65e-39;32!UBERON:0000073;1.77e-38;53!UBERON:0002616;1.77e-38;53!UBERON:0001869;4.20e-38;32!UBERON:0003528;1.27e-36;34!UBERON:0002020;1.27e-36;34!UBERON:0000956;2.09e-35;25!UBERON:0000203;2.09e-35;25!UBERON:0002780;4.90e-35;41!UBERON:0001890;4.90e-35;41!UBERON:0002619;1.39e-27;22!UBERON:0001950;1.80e-26;20!UBERON:0001017;6.59e-25;75!UBERON:0001016;1.15e-19;83!UBERON:0000955;1.59e-19;68!UBERON:0004733;2.42e-13;12!UBERON:0002028;2.42e-13;12!UBERON:0004732;3.26e-12;13!UBERON:0000200;1.79e-11;6!UBERON:0002298;2.36e-11;6!UBERON:0002420;1.49e-10;9!UBERON:0007245;1.49e-10;9!UBERON:0010009;1.49e-10;9!UBERON:0010011;1.49e-10;9!UBERON:0000454;1.49e-10;9!UBERON:0001871;1.59e-10;6!UBERON:0000125;2.84e-10;9!UBERON:0002308;2.84e-10;9!UBERON:0009663;1.75e-09;7!UBERON:0002240;2.63e-09;3!UBERON:0005174;2.63e-09;3!UBERON:0001137;2.63e-09;3!UBERON:0001872;4.35e-09;5!UBERON:0001896;5.28e-09;3!UBERON:0005290;5.28e-09;3!UBERON:0011216;2.26e-08;132!UBERON:0007023;1.13e-07;114!UBERON:0002680;2.62e-07;9!UBERON:0001895;2.62e-07;9!UBERON:0001897;5.88e-07;2!UBERON:0010225;5.88e-07;2!UBERON:0002771;8.49e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.71e-70,56;UBERON:0005068,4.71e-70,56;UBERON:0006241,4.71e-70,56;UBERON:0007135,4.71e-70,56;UBERON:0001017,2.63e-68,81;UBERON:0000073,7.06e-63,53;UBERON:0002616,7.06e-63,53;UBERON:0001016,2.06e-60,89;UBERON:0000955,5.43e-52,68;UBERON:0006238,5.43e-52,68;UBERON:0002780,6.33e-50,41;UBERON:0001890,6.33e-50,41;UBERON:0003080,6.33e-50,41;UBERON:0006240,6.33e-50,41;UBERON:0001893,1.94e-48,34;UBERON:0003075,9.93e-45,82;UBERON:0007284,9.93e-45,82;UBERON:0003528,2.04e-44,34;UBERON:0002020,2.04e-44,34;UBERON:0001869,9.29e-44,32;UBERON:0002791,1.29e-43,32;UBERON:0002346,3.51e-42,86;UBERON:0000956,2.07e-35,25;UBERON:0000203,2.07e-35,25;UBERON:0010371,5.04e-35,104;UBERON:0003056,3.24e-31,61;UBERON:0004121,1.40e-30,171;UBERON:0000924,1.40e-30,171;UBERON:0006601,1.40e-30,171;UBERON:0002619,1.35e-27,22;UBERON:0001950,1.68e-26,20;UBERON:0011216,5.94e-24,223;UBERON:0010314,6.06e-24,132;UBERON:0007023,8.08e-24,114;UBERON:0003076,2.14e-20,15;UBERON:0003057,2.14e-20,15;UBERON:0000025,3.25e-15,192;UBERON:0004733,1.16e-13,12;UBERON:0002028,1.16e-13,12;UBERON:0007277,1.16e-13,12;UBERON:0004732,1.67e-12,13;UBERON:0000200,8.50e-12,6;UBERON:0004111,8.88e-12,240;UBERON:0002298,1.15e-11,6;UBERON:0002420,1.11e-10,9;UBERON:0007245,1.11e-10,9;UBERON:0010009,1.11e-10,9;UBERON:0010011,1.11e-10,9;UBERON:0000454,1.11e-10,9;UBERON:0001871,1.53e-10,6;UBERON:0000125,2.01e-10,9;UBERON:0002308,2.01e-10,9;UBERON:0009663,1.37e-09,7;UBERON:0001896,2.56e-09,3;UBERON:0005290,2.56e-09,3;UBERON:0010096,2.56e-09,3;UBERON:0002240,3.23e-09,3;UBERON:0005174,3.23e-09,3;UBERON:0001137,3.23e-09,3;UBERON:0001872,3.87e-09,5;UBERON:0002680,2.08e-07,9;UBERON:0001895,2.08e-07,9;UBERON:0010092,2.08e-07,9;UBERON:0000483,4.65e-07,306;UBERON:0001897,4.94e-07,2;UBERON:0010225,4.94e-07,2;UBERON:0000119,6.74e-07,309;UBERON:0002771,8.40e-07,2;UBERON:0000369,9.01e-07,4;UBERON:0002435,9.01e-07,4;UBERON:0000204,9.01e-07,4;UBERON:0010082,9.01e-07,4 | |||
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|short_description=p@chr13:95365715..95365734,- | |||
}} | }} |
Latest revision as of 17:31, 24 July 2015
Short description: | p@chr13:95365715..95365734, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:95365715..95365734, - |
Coexpression cluster: | C2273_Neural_Astrocyte_small_teratocarcinoma_testicular_brain_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.03e-15 | 5 |
neural cell | 1.70e-11 | 25 |
oligodendrocyte | 3.55e-11 | 7 |
macroglial cell | 3.55e-11 | 7 |
astrocyte | 3.55e-11 | 7 |
oligodendrocyte precursor cell | 3.55e-11 | 7 |
astrocyte of the cerebral cortex | 1.55e-10 | 3 |
neuronal stem cell | 1.19e-09 | 8 |