FFCP PHASE1:Hg19::chr3:141105795..141105814,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:141105795..141105814,+ | |||
|coexpression_cluster_id=C3619 | |coexpression_cluster_id=C3619 | ||
|description=CAGE_peak_at_chr3:141105795..141105814,+ | |description=CAGE_peak_at_chr3:141105795..141105814,+ | ||
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|ontology_enrichment_celltype=CL:0002539!3.72e-09!10 | |ontology_enrichment_celltype=CL:0002539!3.72e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0002539;5.30e-11;10!CL:0000569;5.51e-09;4 | |ontology_enrichment_celltype_v019=CL:0002539;5.30e-11;10!CL:0000569;5.51e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002539,4.56e-11,10;CL:0000569,6.58e-09,4;CL:0000011,6.58e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.75e-12;82!CL:0000011;5.51e-09;4!UBERON:0006215;1.55e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;6.75e-12;82!CL:0000011;5.51e-09;4!UBERON:0006215;1.55e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-35!57;UBERON:0005068!1.71e-35!57;UBERON:0006241!1.71e-35!57;UBERON:0007135!1.71e-35!57;UBERON:0002780!5.27e-29!41;UBERON:0001890!5.27e-29!41;UBERON:0006240!5.27e-29!41;UBERON:0002616!8.72e-29!59;UBERON:0003080!5.82e-28!42;UBERON:0001017!9.26e-28!82;UBERON:0000073!5.77e-27!94;UBERON:0001016!5.77e-27!94;UBERON:0005743!2.29e-26!86;UBERON:0001869!1.22e-25!32;UBERON:0000955!1.32e-25!69;UBERON:0006238!1.32e-25!69;UBERON:0002020!2.96e-25!34;UBERON:0003528!2.96e-25!34;UBERON:0001893!5.70e-25!34;UBERON:0002791!5.47e-24!33;UBERON:0002619!2.61e-22!22;UBERON:0003075!7.63e-21!86;UBERON:0007284!7.63e-21!86;UBERON:0002346!7.72e-21!90;UBERON:0001950!2.06e-20!20;UBERON:0000956!1.26e-18!25;UBERON:0000203!1.26e-18!25;UBERON:0007023!5.90e-18!115;UBERON:0000025!2.91e-17!194;UBERON:0000033!1.02e-15!123;UBERON:0003056!1.20e-15!61;UBERON:0000924!9.35e-15!173;UBERON:0006601!9.35e-15!173;UBERON:0000153!9.62e-15!129;UBERON:0007811!9.62e-15!129;UBERON:0004121!1.65e-14!169;UBERON:0004111!6.34e-13!241;UBERON:0000477!3.03e-11!286;UBERON:0000483!2.50e-09!309;UBERON:0004237!3.72e-09!10;UBERON:0004695!3.72e-09!10;UBERON:0002111!3.72e-09!10;UBERON:0004178!3.72e-09!10;UBERON:0000119!5.69e-09!312;UBERON:0000947!8.72e-09!21;UBERON:0010191!8.72e-09!21;UBERON:0003076!1.22e-08!15;UBERON:0003057!1.22e-08!15;UBERON:0002420!1.84e-08!9;UBERON:0007245!1.84e-08!9;UBERON:0010009!1.84e-08!9;UBERON:0010011!1.84e-08!9;UBERON:0000454!1.84e-08!9;UBERON:0000475!3.56e-08!365;UBERON:0002308!4.52e-08!9;UBERON:0000125!4.52e-08!9;UBERON:0000200!8.42e-08!6;UBERON:0004573!1.38e-07!33;UBERON:0004571!1.38e-07!33;UBERON:0001871!2.44e-07!7;UBERON:0000064!9.89e-07!219 | |ontology_enrichment_uberon=UBERON:0001049!1.71e-35!57;UBERON:0005068!1.71e-35!57;UBERON:0006241!1.71e-35!57;UBERON:0007135!1.71e-35!57;UBERON:0002780!5.27e-29!41;UBERON:0001890!5.27e-29!41;UBERON:0006240!5.27e-29!41;UBERON:0002616!8.72e-29!59;UBERON:0003080!5.82e-28!42;UBERON:0001017!9.26e-28!82;UBERON:0000073!5.77e-27!94;UBERON:0001016!5.77e-27!94;UBERON:0005743!2.29e-26!86;UBERON:0001869!1.22e-25!32;UBERON:0000955!1.32e-25!69;UBERON:0006238!1.32e-25!69;UBERON:0002020!2.96e-25!34;UBERON:0003528!2.96e-25!34;UBERON:0001893!5.70e-25!34;UBERON:0002791!5.47e-24!33;UBERON:0002619!2.61e-22!22;UBERON:0003075!7.63e-21!86;UBERON:0007284!7.63e-21!86;UBERON:0002346!7.72e-21!90;UBERON:0001950!2.06e-20!20;UBERON:0000956!1.26e-18!25;UBERON:0000203!1.26e-18!25;UBERON:0007023!5.90e-18!115;UBERON:0000025!2.91e-17!194;UBERON:0000033!1.02e-15!123;UBERON:0003056!1.20e-15!61;UBERON:0000924!9.35e-15!173;UBERON:0006601!9.35e-15!173;UBERON:0000153!9.62e-15!129;UBERON:0007811!9.62e-15!129;UBERON:0004121!1.65e-14!169;UBERON:0004111!6.34e-13!241;UBERON:0000477!3.03e-11!286;UBERON:0000483!2.50e-09!309;UBERON:0004237!3.72e-09!10;UBERON:0004695!3.72e-09!10;UBERON:0002111!3.72e-09!10;UBERON:0004178!3.72e-09!10;UBERON:0000119!5.69e-09!312;UBERON:0000947!8.72e-09!21;UBERON:0010191!8.72e-09!21;UBERON:0003076!1.22e-08!15;UBERON:0003057!1.22e-08!15;UBERON:0002420!1.84e-08!9;UBERON:0007245!1.84e-08!9;UBERON:0010009!1.84e-08!9;UBERON:0010011!1.84e-08!9;UBERON:0000454!1.84e-08!9;UBERON:0000475!3.56e-08!365;UBERON:0002308!4.52e-08!9;UBERON:0000125!4.52e-08!9;UBERON:0000200!8.42e-08!6;UBERON:0004573!1.38e-07!33;UBERON:0004571!1.38e-07!33;UBERON:0001871!2.44e-07!7;UBERON:0000064!9.89e-07!219 | ||
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| ||
|short_description=p@chr3:141105795..141105814,+ | |short_description=p@chr3:141105795..141105814,+ | ||
}} | }} |
Latest revision as of 16:25, 29 July 2015
Short description: | p@chr3:141105795..141105814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:141105795..141105814, + |
Coexpression cluster: | C3619_cerebellum_occipital_caudate_putamen_Fibroblast_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 4.56e-11 | 10 |
cardiac mesenchymal cell | 6.58e-09 | 4 |
migratory trunk neural crest cell | 6.58e-09 | 4 |