FFCP PHASE1:Hg19::chr6:127840120..127840182,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481848_5end | |association_with_transcript=0bp_to_ENST00000481848_5end | ||
|cluster_id=chr6:127840120..127840182,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_ENST00000481848_5end | |description=CAGE_peak_1_at_ENST00000481848_5end | ||
|id=chr6:127840120..127840182,- | |id=chr6:127840120..127840182,- | ||
|ontology_enrichment_celltype=CL:0002319!2.06e-14!25;CL:0000133!2.19e-14!59;CL:0000055!2.47e-13!180;CL:0000393!5.09e-11!60;CL:0000211!5.09e-11!60;CL:0000333!7.37e-10!41;CL:0000221!7.51e-10!71;CL:0000047!1.32e-09!8;CL:0000183!8.45e-08!59;CL:0000540!1.43e-07!6;CL:0000031!1.43e-07!6;CL:0000404!1.43e-07!6;CL:0000680!1.65e-07!57;CL:0000056!1.65e-07!57;CL:0000355!1.65e-07!57;CL:0000095!1.89e-07!17;CL:0000123!1.89e-07!17;CL:0000188!2.34e-07!9;CL:0000187!2.45e-07!54 | |ontology_enrichment_celltype=CL:0002319!2.06e-14!25;CL:0000133!2.19e-14!59;CL:0000055!2.47e-13!180;CL:0000393!5.09e-11!60;CL:0000211!5.09e-11!60;CL:0000333!7.37e-10!41;CL:0000221!7.51e-10!71;CL:0000047!1.32e-09!8;CL:0000183!8.45e-08!59;CL:0000540!1.43e-07!6;CL:0000031!1.43e-07!6;CL:0000404!1.43e-07!6;CL:0000680!1.65e-07!57;CL:0000056!1.65e-07!57;CL:0000355!1.65e-07!57;CL:0000095!1.89e-07!17;CL:0000123!1.89e-07!17;CL:0000188!2.34e-07!9;CL:0000187!2.45e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.10e-17;25!CL:0000540;1.46e-12;6!CL:0000404;1.46e-12;6!CL:0000128;2.61e-09;7!CL:0000126;2.61e-09;7!CL:0000127;2.61e-09;7!CL:0000333;5.24e-07;5!CL:0002605;6.10e-07;3!CL:0000095;8.84e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.84e-18,25;CL:0000047,2.82e-16,8;CL:0000133,4.68e-16,59;CL:0000540,1.46e-12,6;CL:0000031,1.46e-12,6;CL:0000404,1.46e-12,6;CL:0000221,7.70e-12,72;CL:0000128,1.64e-09,7;CL:0000126,1.64e-09,7;CL:0000127,1.64e-09,7;CL:0002453,1.64e-09,7;CL:0000333,1.74e-07,41;CL:0002605,6.28e-07,3;CL:0000095,7.03e-07,17;CL:0000123,7.03e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;1.46e-12;6!CL:0000133;6.09e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.90e-09;10!DOID:169;1.56e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.10e-09,10;DOID:169,1.64e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.91e-41!94;UBERON:0001016!6.91e-41!94;UBERON:0001017!1.24e-38!82;UBERON:0005743!1.09e-36!86;UBERON:0001049!6.62e-31!57;UBERON:0005068!6.62e-31!57;UBERON:0006241!6.62e-31!57;UBERON:0007135!6.62e-31!57;UBERON:0000955!3.73e-29!69;UBERON:0006238!3.73e-29!69;UBERON:0002616!1.95e-27!59;UBERON:0002346!8.39e-26!90;UBERON:0003075!2.68e-25!86;UBERON:0007284!2.68e-25!86;UBERON:0002780!2.06e-24!41;UBERON:0001890!2.06e-24!41;UBERON:0006240!2.06e-24!41;UBERON:0000924!6.23e-24!173;UBERON:0006601!6.23e-24!173;UBERON:0003080!1.71e-23!42;UBERON:0004121!2.93e-23!169;UBERON:0003056!8.48e-23!61;UBERON:0000033!6.40e-20!123;UBERON:0002020!2.39e-19!34;UBERON:0003528!2.39e-19!34;UBERON:0001893!3.34e-19!34;UBERON:0002791!1.96e-18!33;UBERON:0001869!4.10e-18!32;UBERON:0000153!6.96e-18!129;UBERON:0007811!6.96e-18!129;UBERON:0000956!4.62e-16!25;UBERON:0000203!4.62e-16!25;UBERON:0000119!1.18e-15!312;UBERON:0000475!2.34e-15!365;UBERON:0000483!3.08e-15!309;UBERON:0000025!4.41e-15!194;UBERON:0002619!2.45e-13!22;UBERON:0000481!6.52e-13!347;UBERON:0001950!5.50e-12!20;UBERON:0000922!4.11e-10!612;UBERON:0004111!1.16e-09!241;UBERON:0000477!2.40e-09!286;UBERON:0003076!1.65e-08!15;UBERON:0003057!1.65e-08!15;UBERON:0002050!1.76e-08!605;UBERON:0005423!1.76e-08!605;UBERON:0000923!3.03e-08!604;UBERON:0005291!3.03e-08!604;UBERON:0006598!3.03e-08!604;UBERON:0002532!3.03e-08!604;UBERON:0000064!4.56e-08!219;UBERON:0000914!5.89e-08!83;UBERON:0002329!5.89e-08!83;UBERON:0003077!5.89e-08!83;UBERON:0003059!5.89e-08!83;UBERON:0007282!5.89e-08!83;UBERON:0009618!5.89e-08!83;UBERON:0007285!5.89e-08!83;UBERON:0004732!1.76e-07!13;UBERON:0004290!1.87e-07!70;UBERON:0000468!3.85e-07!659;UBERON:0002385!7.03e-07!63;UBERON:0001015!7.03e-07!63;UBERON:0000383!7.03e-07!63;UBERON:0001894!9.07e-07!7;UBERON:0006222!9.07e-07!7 | |ontology_enrichment_uberon=UBERON:0000073!6.91e-41!94;UBERON:0001016!6.91e-41!94;UBERON:0001017!1.24e-38!82;UBERON:0005743!1.09e-36!86;UBERON:0001049!6.62e-31!57;UBERON:0005068!6.62e-31!57;UBERON:0006241!6.62e-31!57;UBERON:0007135!6.62e-31!57;UBERON:0000955!3.73e-29!69;UBERON:0006238!3.73e-29!69;UBERON:0002616!1.95e-27!59;UBERON:0002346!8.39e-26!90;UBERON:0003075!2.68e-25!86;UBERON:0007284!2.68e-25!86;UBERON:0002780!2.06e-24!41;UBERON:0001890!2.06e-24!41;UBERON:0006240!2.06e-24!41;UBERON:0000924!6.23e-24!173;UBERON:0006601!6.23e-24!173;UBERON:0003080!1.71e-23!42;UBERON:0004121!2.93e-23!169;UBERON:0003056!8.48e-23!61;UBERON:0000033!6.40e-20!123;UBERON:0002020!2.39e-19!34;UBERON:0003528!2.39e-19!34;UBERON:0001893!3.34e-19!34;UBERON:0002791!1.96e-18!33;UBERON:0001869!4.10e-18!32;UBERON:0000153!6.96e-18!129;UBERON:0007811!6.96e-18!129;UBERON:0000956!4.62e-16!25;UBERON:0000203!4.62e-16!25;UBERON:0000119!1.18e-15!312;UBERON:0000475!2.34e-15!365;UBERON:0000483!3.08e-15!309;UBERON:0000025!4.41e-15!194;UBERON:0002619!2.45e-13!22;UBERON:0000481!6.52e-13!347;UBERON:0001950!5.50e-12!20;UBERON:0000922!4.11e-10!612;UBERON:0004111!1.16e-09!241;UBERON:0000477!2.40e-09!286;UBERON:0003076!1.65e-08!15;UBERON:0003057!1.65e-08!15;UBERON:0002050!1.76e-08!605;UBERON:0005423!1.76e-08!605;UBERON:0000923!3.03e-08!604;UBERON:0005291!3.03e-08!604;UBERON:0006598!3.03e-08!604;UBERON:0002532!3.03e-08!604;UBERON:0000064!4.56e-08!219;UBERON:0000914!5.89e-08!83;UBERON:0002329!5.89e-08!83;UBERON:0003077!5.89e-08!83;UBERON:0003059!5.89e-08!83;UBERON:0007282!5.89e-08!83;UBERON:0009618!5.89e-08!83;UBERON:0007285!5.89e-08!83;UBERON:0004732!1.76e-07!13;UBERON:0004290!1.87e-07!70;UBERON:0000468!3.85e-07!659;UBERON:0002385!7.03e-07!63;UBERON:0001015!7.03e-07!63;UBERON:0000383!7.03e-07!63;UBERON:0001894!9.07e-07!7;UBERON:0006222!9.07e-07!7 | ||
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| ||
|short_description=p1@ENST00000481848 | |short_description=p1@ENST00000481848 | ||
}} | }} |
Latest revision as of 19:14, 30 July 2015
Short description: | p1@ENST00000481848 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000481848_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000481848_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.84e-18 | 25 |
neuronal stem cell | 2.82e-16 | 8 |
neurectodermal cell | 4.68e-16 | 59 |
neuron | 1.46e-12 | 6 |
neuroblast | 1.46e-12 | 6 |
electrically signaling cell | 1.46e-12 | 6 |
ectodermal cell | 7.70e-12 | 72 |
oligodendrocyte | 1.64e-09 | 7 |
macroglial cell | 1.64e-09 | 7 |
astrocyte | 1.64e-09 | 7 |
oligodendrocyte precursor cell | 1.64e-09 | 7 |
migratory neural crest cell | 1.74e-07 | 41 |
astrocyte of the cerebral cortex | 6.28e-07 | 3 |
neuron associated cell | 7.03e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.03e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.10e-09 | 10 |
neuroendocrine tumor | 1.64e-08 | 6 |