FFCP PHASE1:Hg19::chr9:3525848..3525863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5991 | |EntrezGene=5991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9984 | |HGNC=9984 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGD7,E9PGD6,F6UGA0,P48380,Q5JTM2 | |UniProt=E9PGD7,E9PGD6,F6UGA0,P48380,Q5JTM2 | ||
|association_with_transcript=119bp_to_ENST00000302303,ENST00000381985,ENST00000381986,ENST00000381992,ENST00000382004,NM_002919,NM_134428,uc003zhr.2,uc003zhs.1,uc010mhd.2,uc010mhe.1_5end | |association_with_transcript=119bp_to_ENST00000302303,ENST00000381985,ENST00000381986,ENST00000381992,ENST00000382004,NM_002919,NM_134428,uc003zhr.2,uc003zhs.1,uc010mhd.2,uc010mhe.1_5end | ||
|cluster_id=chr9:3525848..3525863,- | |||
|coexpression_cluster_id=C111 | |coexpression_cluster_id=C111 | ||
|description=CAGE_peak_6_at_RFX3_5end | |description=CAGE_peak_6_at_RFX3_5end | ||
|id=chr9:3525848..3525863,- | |id=chr9:3525848..3525863,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.80e-12;82!UBERON:0006215;1.29e-09;3!UBERON:0006241;1.38e-09;3!UBERON:0003057;1.38e-09;3!UBERON:0010122;1.86e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.20e-31!57;UBERON:0005068!5.20e-31!57;UBERON:0006241!5.20e-31!57;UBERON:0007135!5.20e-31!57;UBERON:0001017!1.39e-26!82;UBERON:0002780!2.50e-26!41;UBERON:0001890!2.50e-26!41;UBERON:0006240!2.50e-26!41;UBERON:0003080!3.16e-25!42;UBERON:0005743!1.43e-24!86;UBERON:0002616!3.61e-24!59;UBERON:0007023!8.53e-23!115;UBERON:0000955!1.87e-22!69;UBERON:0006238!1.87e-22!69;UBERON:0000073!3.13e-22!94;UBERON:0001016!3.13e-22!94;UBERON:0002020!2.59e-21!34;UBERON:0003528!2.59e-21!34;UBERON:0001893!6.60e-21!34;UBERON:0002791!1.22e-20!33;UBERON:0002346!1.38e-20!90;UBERON:0003075!1.57e-20!86;UBERON:0007284!1.57e-20!86;UBERON:0001869!9.95e-20!32;UBERON:0003056!4.47e-16!61;UBERON:0000956!1.37e-15!25;UBERON:0000203!1.37e-15!25;UBERON:0002619!2.11e-14!22;UBERON:0001950!7.52e-13!20;UBERON:0000153!1.13e-09!129;UBERON:0007811!1.13e-09!129;UBERON:0000924!1.99e-09!173;UBERON:0006601!1.99e-09!173;UBERON:0004121!3.59e-09!169;UBERON:0000033!1.37e-08!123;UBERON:0002308!3.33e-07!9;UBERON:0000125!3.33e-07!9;UBERON:0002420!4.05e-07!9;UBERON:0007245!4.05e-07!9;UBERON:0010009!4.05e-07!9;UBERON:0010011!4.05e-07!9;UBERON:0000454!4.05e-07!9;UBERON:0003076!4.47e-07!15;UBERON:0003057!4.47e-07!15;UBERON:0001894!6.20e-07!7;UBERON:0006222!6.20e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!5.20e-31!57;UBERON:0005068!5.20e-31!57;UBERON:0006241!5.20e-31!57;UBERON:0007135!5.20e-31!57;UBERON:0001017!1.39e-26!82;UBERON:0002780!2.50e-26!41;UBERON:0001890!2.50e-26!41;UBERON:0006240!2.50e-26!41;UBERON:0003080!3.16e-25!42;UBERON:0005743!1.43e-24!86;UBERON:0002616!3.61e-24!59;UBERON:0007023!8.53e-23!115;UBERON:0000955!1.87e-22!69;UBERON:0006238!1.87e-22!69;UBERON:0000073!3.13e-22!94;UBERON:0001016!3.13e-22!94;UBERON:0002020!2.59e-21!34;UBERON:0003528!2.59e-21!34;UBERON:0001893!6.60e-21!34;UBERON:0002791!1.22e-20!33;UBERON:0002346!1.38e-20!90;UBERON:0003075!1.57e-20!86;UBERON:0007284!1.57e-20!86;UBERON:0001869!9.95e-20!32;UBERON:0003056!4.47e-16!61;UBERON:0000956!1.37e-15!25;UBERON:0000203!1.37e-15!25;UBERON:0002619!2.11e-14!22;UBERON:0001950!7.52e-13!20;UBERON:0000153!1.13e-09!129;UBERON:0007811!1.13e-09!129;UBERON:0000924!1.99e-09!173;UBERON:0006601!1.99e-09!173;UBERON:0004121!3.59e-09!169;UBERON:0000033!1.37e-08!123;UBERON:0002308!3.33e-07!9;UBERON:0000125!3.33e-07!9;UBERON:0002420!4.05e-07!9;UBERON:0007245!4.05e-07!9;UBERON:0010009!4.05e-07!9;UBERON:0010011!4.05e-07!9;UBERON:0000454!4.05e-07!9;UBERON:0003076!4.47e-07!15;UBERON:0003057!4.47e-07!15;UBERON:0001894!6.20e-07!7;UBERON:0006222!6.20e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.10e-31;53!UBERON:0002616;8.10e-31;53!UBERON:0002780;1.61e-27;41!UBERON:0001890;1.61e-27;41!UBERON:0003528;1.08e-22;34!UBERON:0002020;1.08e-22;34!UBERON:0002619;4.18e-22;22!UBERON:0001017;1.33e-21;75!UBERON:0001893;2.54e-20;34!UBERON:0002791;4.65e-20;32!UBERON:0001894;5.18e-20;7!UBERON:0001869;5.82e-20;32!UBERON:0000955;1.31e-19;68!UBERON:0000956;3.88e-19;25!UBERON:0000203;3.88e-19;25!UBERON:0001950;1.11e-17;20!UBERON:0001016;1.11e-16;83!UBERON:0004733;1.11e-14;12!UBERON:0002028;1.11e-14;12!UBERON:0004732;1.95e-13;13!UBERON:0002784;2.11e-12;4!UBERON:0002298;2.47e-12;6!UBERON:0003296;3.61e-12;4!UBERON:0010133;3.61e-12;4!UBERON:0007023;2.41e-11;114!UBERON:0005383;3.95e-10;3!UBERON:0005382;3.95e-10;3!UBERON:0001896;6.45e-10;3!UBERON:0005290;6.45e-10;3!UBERON:0002240;1.38e-09;3!UBERON:0005174;1.38e-09;3!UBERON:0001137;1.38e-09;3!UBERON:0000125;3.39e-08;9!UBERON:0002308;3.39e-08;9!UBERON:0000200;4.18e-08;6!UBERON:0002680;6.23e-08;9!UBERON:0001895;6.23e-08;9!UBERON:0000369;1.12e-07;4!UBERON:0002435;1.12e-07;4!UBERON:0000204;1.12e-07;4!UBERON:0001873;1.86e-07;2!UBERON:0002771;3.47e-07;2!UBERON:0001905;3.47e-07;2!UBERON:0001954;3.47e-07;2!UBERON:0002757;3.47e-07;2!UBERON:0010134;3.47e-07;2!UBERON:0003022;3.47e-07;2!UBERON:0005408;3.47e-07;2!UBERON:0002421;3.47e-07;2!UBERON:0001899;3.47e-07;2!UBERON:0002600;3.47e-07;2!UBERON:0001871;6.12e-07;6!UBERON:0001897;7.07e-07;2!UBERON:0010225;7.07e-07;2!UBERON:0011216;9.00e-07;132 | |||
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|short_description=p6@RFX3 | |short_description=p6@RFX3 | ||
}} | }} |
Latest revision as of 07:09, 17 September 2015
Short description: | p6@RFX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RFX3_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 119bp_to_ENST00000302303, ENST00000381985, ENST00000381986, ENST00000381992, ENST00000382004, NM_002919, NM_134428, uc003zhr.2, uc003zhs.1, uc010mhd.2, uc010mhe.1_5end |
EntrezGene: | RFX3 |
HGNC: | 9984 |
UniProt: | E9PGD7E9PGD6F6UGA0P48380Q5JTM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data