FFCP PHASE1:Hg19::chr13:58205869..58205900,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:58205869..58205900,+ to FFCP PHASE1:Hg19::chr13:58205869..58205900,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27253 | |EntrezGene=27253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14267 | |HGNC=14267 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000484979_5end | |||
|cluster_id=chr13:58205869..58205900,+ | |||
|coexpression_cluster_id=C2267 | |||
|description=CAGE_peak_2_at_PCDH17_5end | |||
|id=chr13:58205869..58205900,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.64e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-70!115;UBERON:0001049!3.04e-60!57;UBERON:0005068!3.04e-60!57;UBERON:0006241!3.04e-60!57;UBERON:0007135!3.04e-60!57;UBERON:0002346!1.19e-50!90;UBERON:0002616!2.95e-50!59;UBERON:0003080!1.16e-47!42;UBERON:0000073!1.28e-47!94;UBERON:0001016!1.28e-47!94;UBERON:0003075!1.92e-47!86;UBERON:0007284!1.92e-47!86;UBERON:0002780!1.15e-46!41;UBERON:0001890!1.15e-46!41;UBERON:0006240!1.15e-46!41;UBERON:0005743!8.53e-46!86;UBERON:0001017!2.09e-45!82;UBERON:0000955!1.39e-43!69;UBERON:0006238!1.39e-43!69;UBERON:0001893!2.43e-41!34;UBERON:0002020!3.04e-41!34;UBERON:0003528!3.04e-41!34;UBERON:0002791!4.13e-40!33;UBERON:0001869!1.47e-38!32;UBERON:0003056!2.31e-36!61;UBERON:0000924!9.87e-31!173;UBERON:0006601!9.87e-31!173;UBERON:0000153!8.41e-30!129;UBERON:0007811!8.41e-30!129;UBERON:0000956!2.50e-29!25;UBERON:0000203!2.50e-29!25;UBERON:0002619!2.82e-29!22;UBERON:0004121!2.91e-28!169;UBERON:0000033!1.30e-27!123;UBERON:0001950!1.14e-26!20;UBERON:0000025!8.17e-21!194;UBERON:0004111!2.44e-17!241;UBERON:0000477!3.54e-16!286;UBERON:0000064!6.95e-16!219;UBERON:0000483!7.38e-16!309;UBERON:0000119!1.90e-15!312;UBERON:0000475!7.36e-14!365;UBERON:0000481!9.99e-14!347;UBERON:0002420!1.17e-13!9;UBERON:0007245!1.17e-13!9;UBERON:0010009!1.17e-13!9;UBERON:0010011!1.17e-13!9;UBERON:0000454!1.17e-13!9;UBERON:0003076!2.42e-13!15;UBERON:0003057!2.42e-13!15;UBERON:0002308!2.83e-13!9;UBERON:0000125!2.83e-13!9;UBERON:0001871!1.27e-11!7;UBERON:0000922!2.11e-11!612;UBERON:0004732!3.78e-11!13;UBERON:0002298!6.47e-11!8;UBERON:0009663!6.86e-11!7;UBERON:0000468!8.67e-11!659;UBERON:0002050!1.91e-10!605;UBERON:0005423!1.91e-10!605;UBERON:0004733!4.68e-10!12;UBERON:0002028!4.68e-10!12;UBERON:0007277!4.68e-10!12;UBERON:0000923!5.42e-10!604;UBERON:0005291!5.42e-10!604;UBERON:0006598!5.42e-10!604;UBERON:0002532!5.42e-10!604;UBERON:0000062!5.44e-09!511;UBERON:0000200!5.47e-09!6;UBERON:0000467!1.56e-08!625;UBERON:0000480!1.84e-08!626;UBERON:0000349!2.73e-08!5;UBERON:0001872!2.13e-07!5;UBERON:0002021!2.31e-07!5;UBERON:0000369!6.15e-07!4;UBERON:0002435!6.15e-07!4;UBERON:0000204!6.15e-07!4;UBERON:0010082!6.15e-07!4;UBERON:0001894!8.07e-07!7;UBERON:0006222!8.07e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.33e-47;34!UBERON:0002020;4.33e-47;34!UBERON:0002791;7.88e-47;32!UBERON:0001893;5.09e-46;34!UBERON:0001869;1.17e-45;32!UBERON:0002780;1.36e-43;41!UBERON:0001890;1.36e-43;41!UBERON:0002619;1.12e-40;22!UBERON:0000073;3.12e-37;53!UBERON:0002616;3.12e-37;53!UBERON:0001950;5.48e-36;20!UBERON:0000956;2.52e-35;25!UBERON:0000203;2.52e-35;25!UBERON:0002420;9.63e-24;9!UBERON:0007245;9.63e-24;9!UBERON:0010009;9.63e-24;9!UBERON:0010011;9.63e-24;9!UBERON:0000454;9.63e-24;9!UBERON:0000125;6.78e-23;9!UBERON:0002308;6.78e-23;9!UBERON:0001017;2.20e-21;75!UBERON:0000955;7.90e-21;68!UBERON:0001016;5.65e-20;83!UBERON:0009663;1.21e-18;7!UBERON:0000200;3.32e-15;6!UBERON:0000349;4.92e-14;5!UBERON:0001871;1.23e-13;6!UBERON:0007023;2.83e-13;114!UBERON:0000369;2.00e-11;4!UBERON:0002435;2.00e-11;4!UBERON:0000204;2.00e-11;4!UBERON:0004732;2.79e-11;13!UBERON:0002298;2.97e-10;6!UBERON:0004733;1.60e-09;12!UBERON:0002028;1.60e-09;12!UBERON:0002050;1.65e-09;5!UBERON:0005423;1.65e-09;5!UBERON:0011216;4.09e-09;132!UBERON:0005383;6.34e-09;3!UBERON:0005382;6.34e-09;3!UBERON:0000922;6.43e-09;49!UBERON:0002021;9.46e-09;5!UBERON:0001872;1.81e-08;5!UBERON:0001896;4.34e-08;3!UBERON:0001870;4.34e-08;3!UBERON:0005290;4.34e-08;3!UBERON:0002346;2.06e-07;4!UBERON:0000923;2.06e-07;4!UBERON:0010316;2.06e-07;4!UBERON:0005291;2.06e-07;4!UBERON:0001876;8.75e-07;2!UBERON:0001897;8.75e-07;2!UBERON:0010225;8.75e-07;2!UBERON:0002784;9.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.53e-72,56;UBERON:0005068,8.53e-72,56;UBERON:0006241,8.53e-72,56;UBERON:0007135,8.53e-72,56;UBERON:0000073,9.34e-69,53;UBERON:0002616,9.34e-69,53;UBERON:0002780,1.01e-60,41;UBERON:0001890,1.01e-60,41;UBERON:0003080,1.01e-60,41;UBERON:0006240,1.01e-60,41;UBERON:0001893,5.09e-57,34;UBERON:0003528,7.36e-57,34;UBERON:0002020,7.36e-57,34;UBERON:0000955,3.48e-56,68;UBERON:0006238,3.48e-56,68;UBERON:0002346,6.49e-56,86;UBERON:0002791,2.40e-52,32;UBERON:0001869,4.96e-52,32;UBERON:0001017,1.24e-50,81;UBERON:0003075,2.25e-50,82;UBERON:0007284,2.25e-50,82;UBERON:0001016,2.05e-49,89;UBERON:0003056,4.80e-43,61;UBERON:0007023,6.73e-43,114;UBERON:0002619,4.89e-41,22;UBERON:0010371,2.93e-37,104;UBERON:0001950,2.77e-36,20;UBERON:0000956,1.22e-35,25;UBERON:0000203,1.22e-35,25;UBERON:0010314,1.47e-31,132;UBERON:0011216,7.74e-28,223;UBERON:0000025,2.18e-26,192;UBERON:0004121,1.56e-25,171;UBERON:0000924,1.56e-25,171;UBERON:0006601,1.56e-25,171;UBERON:0002420,3.82e-24,9;UBERON:0007245,3.82e-24,9;UBERON:0010009,3.82e-24,9;UBERON:0010011,3.82e-24,9;UBERON:0000454,3.82e-24,9;UBERON:0000125,2.00e-23,9;UBERON:0002308,2.00e-23,9;UBERON:0009663,5.76e-19,7;UBERON:0004111,2.18e-18,240;UBERON:0000200,2.04e-15,6;UBERON:0000349,4.06e-14,5;UBERON:0000483,9.88e-14,306;UBERON:0001871,1.01e-13,6;UBERON:0000119,1.83e-13,309;UBERON:0003076,1.32e-12,15;UBERON:0003057,1.32e-12,15;UBERON:0004732,1.27e-11,13;UBERON:0000369,1.33e-11,4;UBERON:0002435,1.33e-11,4;UBERON:0000204,1.33e-11,4;UBERON:0010082,1.33e-11,4;UBERON:0002298,1.16e-10,6;UBERON:0004733,7.46e-10,12;UBERON:0002028,7.46e-10,12;UBERON:0007277,7.46e-10,12;UBERON:0005383,3.65e-09,3;UBERON:0005382,3.65e-09,3;UBERON:0001872,1.47e-08,5;UBERON:0002050,1.48e-08,564;UBERON:0002021,1.50e-08,5;UBERON:0000922,1.59e-08,592;UBERON:0001896,2.20e-08,3;UBERON:0005290,2.20e-08,3;UBERON:0010096,2.20e-08,3;UBERON:0005423,2.26e-08,581;UBERON:0001870,2.92e-08,3;UBERON:0000923,3.65e-08,560;UBERON:0010316,3.65e-08,560;UBERON:0005291,3.65e-08,560;UBERON:0006598,3.65e-08,560;UBERON:0010317,3.65e-08,560;UBERON:0002532,3.65e-08,560;UBERON:0001876,7.26e-07,2;UBERON:0001897,9.59e-07,2;UBERON:0010225,9.59e-07,2 | |||
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|short_description=p2@PCDH17 | |||
}} | }} |
Latest revision as of 20:13, 17 September 2015
Short description: | p2@PCDH17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDH17_5end |
Coexpression cluster: | C2267_neuroblastoma_spleen_amygdala_neuroectodermal_lung_occipital_parietal |
Association with transcript: | -43bp_to_ENST00000484979_5end |
EntrezGene: | PCDH17 |
HGNC: | 14267 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data